RNA–Protein interactions for RNA: ENST00000425819.6

SCRN1-205, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-205ENST00000425819 KRTAP15-1Q3LI76 137 aa5.67□□□□□ -1.5
SCRN1-205ENST00000425819 MT1LQ93083 61 aa5.63□□□□□ -1.51
SCRN1-205ENST00000425819 MUC12Q9UKN1 5478 aa5.63□□□□□ -1.51
SCRN1-205ENST00000425819 SPRR2EP22531 72 aa5.6□□□□□ -1.51
SCRN1-205ENST00000425819 SPRR2BP35325 72 aa5.6□□□□□ -1.51
SCRN1-205ENST00000425819 SPRR2AP35326 72 aa5.6□□□□□ -1.51
SCRN1-205ENST00000425819 LCE1AQ5T7P2 110 aa5.59□□□□□ -1.51
SCRN1-205ENST00000425819 KRTAP19-3Q7Z4W3 81 aa5.59□□□□□ -1.51
SCRN1-205ENST00000425819 MT1GP13640 62 aa5.51□□□□□ -1.53
SCRN1-205ENST00000425819 LCE5AQ5TCM9 118 aa5.51□□□□□ -1.53
SCRN1-205ENST00000425819 MDN1Q9NU22 5596 aa5.51□□□□□ -1.53
SCRN1-205ENST00000425819 LCE3BQ5TA77 95 aa5.5□□□□□ -1.53
SCRN1-205ENST00000425819 NDUFAF8A1L188 74 aa5.47□□□□□ -1.53
SCRN1-205ENST00000425819 MT1MQ8N339 61 aa5.46□□□□□ -1.54
SCRN1-205ENST00000425819 KRTAP4-7Q9BYR0 210 aa5.46□□□□□ -1.54
SCRN1-205ENST00000425819 LCE3CQ5T5A8 94 aa5.44□□□□□ -1.54
SCRN1-205ENST00000425819 KRTAP4-12Q9BQ66 201 aa5.44□□□□□ -1.54
SCRN1-205ENST00000425819 KRTAP19-4Q3LI73 84 aa5.43□□□□□ -1.54
SCRN1-205ENST00000425819 SPRR2DP22532 72 aa5.4□□□□□ -1.55
SCRN1-205ENST00000425819 NEBP20929 6669 aa5.39□□□□□ -1.55
SCRN1-205ENST00000425819 A0A0A0MQY5 61 aa5.38□□□□□ -1.55
SCRN1-205ENST00000425819 KRTAP4-3Q9BYR4 195 aa5.37□□□□□ -1.55
SCRN1-205ENST00000425819 KRTAP9-9Q9BYP9 154 aa5.36□□□□□ -1.55
SCRN1-205ENST00000425819 KRTAP9-4Q9BYQ2 154 aa5.36□□□□□ -1.55
SCRN1-205ENST00000425819 LUZP6Q538Z0 58 aa5.21□□□□□ -1.57
SCRN1-205ENST00000425819 SPRR5A0A1B0GTR4 108 aa5.19□□□□□ -1.58
SCRN1-205ENST00000425819 KRTAP9-6A8MVA2 160 aa5.15□□□□□ -1.59
SCRN1-205ENST00000425819 LCE1DQ5T752 114 aa5.14□□□□□ -1.59
SCRN1-205ENST00000425819 KRTAP2-3P0C7H8 128 aa5.12□□□□□ -1.59
SCRN1-205ENST00000425819 KRTAP2-4Q9BYR9 128 aa5.12□□□□□ -1.59
SCRN1-205ENST00000425819 KRTAP20-1Q3LI63 56 aa5.11□□□□□ -1.59
SCRN1-205ENST00000425819 DSTQ03001 7570 aaKnown RBP5.1□□□□□ -1.59
SCRN1-205ENST00000425819 KRTAP4-9Q9BYQ8 210 aa5.02□□□□□ -1.61
SCRN1-205ENST00000425819 KRTAP2-2Q9BYT5 123 aa5□□□□□ -1.61
SCRN1-205ENST00000425819 KRTAP2-1Q9BYU5 128 aa5□□□□□ -1.61
SCRN1-205ENST00000425819 KRTAP4-2Q9BYR5 136 aa4.95□□□□□ -1.62
SCRN1-205ENST00000425819 KRTAP5-5Q701N2 237 aaPredicted RBP4.93□□□□□ -1.62
SCRN1-205ENST00000425819 KRTAP5-4Q6L8H1 288 aa4.8□□□□□ -1.64
SCRN1-205ENST00000425819 MT1AP04731 61 aa4.79□□□□□ -1.64
SCRN1-205ENST00000425819 KRTAP4-11Q9BYQ6 195 aa4.79□□□□□ -1.64
SCRN1-205ENST00000425819 KRTAP6-1Q3LI64 71 aa4.76□□□□□ -1.65
SCRN1-205ENST00000425819 LCE4AQ5TA78 99 aa4.76□□□□□ -1.65
SCRN1-205ENST00000425819 MT4P47944 62 aa4.7□□□□□ -1.66
SCRN1-205ENST00000425819 KRTAP12-4P60329 112 aa4.64□□□□□ -1.67
SCRN1-205ENST00000425819 SYNE1Q8NF91 8797 aaKnown RBP4.59□□□□□ -1.67
SCRN1-205ENST00000425819 KRTAP5-3Q6L8H2 238 aa4.58□□□□□ -1.68
SCRN1-205ENST00000425819 INE1O15225 51 aa4.55□□□□□ -1.68
SCRN1-205ENST00000425819 KRTAP20-2Q3LI61 65 aa4.51□□□□□ -1.69
SCRN1-205ENST00000425819 HMCN1Q96RW7 5635 aa4.47□□□□□ -1.69
SCRN1-205ENST00000425819 KRTAP6-2Q3LI66 62 aa4.42□□□□□ -1.7
SCRN1-205ENST00000425819 MT3P25713 68 aa4.35□□□□□ -1.71
SCRN1-205ENST00000425819 KRTAP5-2Q701N4 177 aa4.31□□□□□ -1.72
SCRN1-205ENST00000425819 AHNAK2Q8IVF2 5795 aa4.06□□□□□ -1.76
SCRN1-205ENST00000425819 LCE3DQ9BYE3 92 aa4.05□□□□□ -1.76
SCRN1-205ENST00000425819 KRTAP5-10Q6L8G5 202 aa3.96□□□□□ -1.78
SCRN1-205ENST00000425819 OBSCNQ5VST9 7968 aa3.94□□□□□ -1.78
SCRN1-205ENST00000425819 LCE3EQ5T5B0 92 aa3.91□□□□□ -1.78
SCRN1-205ENST00000425819 GPR98Q8WXG9 6306 aa3.82□□□□□ -1.8
SCRN1-205ENST00000425819 KRTAP5-8O75690 187 aa3.81□□□□□ -1.8
SCRN1-205ENST00000425819 LCE1EQ5T753 118 aa3.8□□□□□ -1.8
SCRN1-205ENST00000425819 KRTAP5-1Q6L8H4 278 aa3.77□□□□□ -1.81
SCRN1-205ENST00000425819 KRTAP5-7Q6L8G8 165 aa3.69□□□□□ -1.82
SCRN1-205ENST00000425819 LCE1BQ5T7P3 118 aa3.62□□□□□ -1.83
SCRN1-205ENST00000425819 MUC5ACP98088 5654 aa3.55□□□□□ -1.84
SCRN1-205ENST00000425819 LCE1CQ5T751 118 aa3.55□□□□□ -1.84
SCRN1-205ENST00000425819 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.41□□□□□ -1.86
SCRN1-205ENST00000425819 PRM1P04553 51 aa3.33□□□□□ -1.88
SCRN1-205ENST00000425819 MUC5BQ9HC84 5762 aaPredicted RBP3.24□□□□□ -1.89
SCRN1-205ENST00000425819 KRTAP5-11Q6L8G4 156 aa3.21□□□□□ -1.9
SCRN1-205ENST00000425819 AHNAKQ09666 5890 aaKnown RBP3.12□□□□□ -1.91
SCRN1-205ENST00000425819 KRTAP21-2Q3LI59 83 aa3.11□□□□□ -1.91
SCRN1-205ENST00000425819 LCE1FQ5T754 118 aa2.88□□□□□ -1.95
SCRN1-205ENST00000425819 KRTAP4-4Q9BYR3 166 aa2.81□□□□□ -1.96
SCRN1-205ENST00000425819 PHGR1C9JFL3 82 aa2.71□□□□□ -1.98
SCRN1-205ENST00000425819 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
SCRN1-205ENST00000425819 KRTAP21-1Q3LI58 79 aa1.98□□□□□ -2.09
SCRN1-205ENST00000425819 MUC16Q8WXI7 14507 aa1.7□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 112.1 ms