RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 KRTAP19-3Q7Z4W3 81 aa8.72□□□□□ -1.01
APOE-202ENST00000425718 PMAIP1Q13794 54 aa8.71□□□□□ -1.02
APOE-202ENST00000425718 SPRR2DP22532 72 aa8.66□□□□□ -1.02
APOE-202ENST00000425718 PRO0628Q9UI54 55 aa8.66□□□□□ -1.02
APOE-202ENST00000425718 MT1GP13640 62 aa8.63□□□□□ -1.03
APOE-202ENST00000425718 LCE5AQ5TCM9 118 aa8.63□□□□□ -1.03
APOE-202ENST00000425718 MT1LQ93083 61 aa8.6□□□□□ -1.03
APOE-202ENST00000425718 KRTAP20-1Q3LI63 56 aa8.54□□□□□ -1.04
APOE-202ENST00000425718 KRTAP2-3P0C7H8 128 aa8.52□□□□□ -1.05
APOE-202ENST00000425718 KRTAP19-4Q3LI73 84 aa8.52□□□□□ -1.05
APOE-202ENST00000425718 KRTAP2-4Q9BYR9 128 aa8.52□□□□□ -1.05
APOE-202ENST00000425718 KRTAP15-1Q3LI76 137 aa8.44□□□□□ -1.06
APOE-202ENST00000425718 MT1MQ8N339 61 aa8.41□□□□□ -1.06
APOE-202ENST00000425718 LCE3BQ5TA77 95 aa8.36□□□□□ -1.07
APOE-202ENST00000425718 KRTAP2-2Q9BYT5 123 aa8.29□□□□□ -1.08
APOE-202ENST00000425718 KRTAP2-1Q9BYU5 128 aa8.29□□□□□ -1.08
APOE-202ENST00000425718 LCE3CQ5T5A8 94 aa8.13□□□□□ -1.11
APOE-202ENST00000425718 KTN1-AS1Q86SY8 53 aa8.13□□□□□ -1.11
APOE-202ENST00000425718 DSTQ03001 7570 aaKnown RBP8.12□□□□□ -1.11
APOE-202ENST00000425718 PRAC1Q96KF2 57 aa8.09□□□□□ -1.11
APOE-202ENST00000425718 KRTAP4-7Q9BYR0 210 aa8.09□□□□□ -1.11
APOE-202ENST00000425718 KRTAP4-3Q9BYR4 195 aa8.07□□□□□ -1.12
APOE-202ENST00000425718 LCE4AQ5TA78 99 aa7.76□□□□□ -1.17
APOE-202ENST00000425718 SVIPQ8NHG7 77 aa7.69□□□□□ -1.18
APOE-202ENST00000425718 KRTAP5-4Q6L8H1 288 aa7.66□□□□□ -1.18
APOE-202ENST00000425718 LOC100996750A0A140TA64 210 aa7.64□□□□□ -1.19
APOE-202ENST00000425718 KRTAP5-5Q701N2 237 aaPredicted RBP7.64□□□□□ -1.19
APOE-202ENST00000425718 KRTAP9-6A8MVA2 160 aa7.52□□□□□ -1.21
APOE-202ENST00000425718 KRTAP4-9Q9BYQ8 210 aa7.5□□□□□ -1.21
APOE-202ENST00000425718 MT4P47944 62 aa7.46□□□□□ -1.22
APOE-202ENST00000425718 LCE1DQ5T752 114 aa7.46□□□□□ -1.22
APOE-202ENST00000425718 KRTAP12-4P60329 112 aa7.4□□□□□ -1.22
APOE-202ENST00000425718 SPRR5A0A1B0GTR4 108 aa7.39□□□□□ -1.23
APOE-202ENST00000425718 MT1AP04731 61 aa7.37□□□□□ -1.23
APOE-202ENST00000425718 HMCN1Q96RW7 5635 aa7.28□□□□□ -1.24
APOE-202ENST00000425718 KRTAP4-6Q9BYQ5 205 aa7.28□□□□□ -1.24
APOE-202ENST00000425718 GPR98Q8WXG9 6306 aa7.25□□□□□ -1.25
APOE-202ENST00000425718 SYNE1Q8NF91 8797 aaKnown RBP7.22□□□□□ -1.25
APOE-202ENST00000425718 KRTAP6-1Q3LI64 71 aa7.21□□□□□ -1.26
APOE-202ENST00000425718 KRTAP20-2Q3LI61 65 aa7.18□□□□□ -1.26
APOE-202ENST00000425718 KRTAP9-4Q9BYQ2 154 aa7.04□□□□□ -1.28
APOE-202ENST00000425718 LUZP6Q538Z0 58 aa6.96□□□□□ -1.3
APOE-202ENST00000425718 KRTAP5-3Q6L8H2 238 aa6.92□□□□□ -1.3
APOE-202ENST00000425718 KRTAP5-2Q701N4 177 aa6.82□□□□□ -1.32
APOE-202ENST00000425718 AHNAK2Q8IVF2 5795 aa6.79□□□□□ -1.32
APOE-202ENST00000425718 KRTAP6-2Q3LI66 62 aa6.78□□□□□ -1.32
APOE-202ENST00000425718 MT3P25713 68 aa6.75□□□□□ -1.33
APOE-202ENST00000425718 KRTAP5-10Q6L8G5 202 aa6.61□□□□□ -1.35
APOE-202ENST00000425718 KRTAP4-11Q9BYQ6 195 aa6.4□□□□□ -1.38
APOE-202ENST00000425718 KRTAP5-7Q6L8G8 165 aa6.31□□□□□ -1.4
APOE-202ENST00000425718 OBSCNQ5VST9 7968 aa6.17□□□□□ -1.42
APOE-202ENST00000425718 KRTAP5-8O75690 187 aa6.14□□□□□ -1.43
APOE-202ENST00000425718 NDUFAF8A1L188 74 aa6.1□□□□□ -1.43
APOE-202ENST00000425718 LCE1EQ5T753 118 aa6.06□□□□□ -1.44
APOE-202ENST00000425718 LCE3DQ9BYE3 92 aa6.03□□□□□ -1.44
APOE-202ENST00000425718 KRTAP5-1Q6L8H4 278 aa5.97□□□□□ -1.45
APOE-202ENST00000425718 KRTAP9-9Q9BYP9 154 aa5.8□□□□□ -1.48
APOE-202ENST00000425718 LCE3EQ5T5B0 92 aa5.79□□□□□ -1.48
APOE-202ENST00000425718 MUC5ACP98088 5654 aa5.78□□□□□ -1.48
APOE-202ENST00000425718 LCE1CQ5T751 118 aa5.6□□□□□ -1.51
APOE-202ENST00000425718 LCE1BQ5T7P3 118 aa5.6□□□□□ -1.51
APOE-202ENST00000425718 AHNAKQ09666 5890 aaKnown RBP5.6□□□□□ -1.51
APOE-202ENST00000425718 KRTAP4-2Q9BYR5 136 aa5.55□□□□□ -1.52
APOE-202ENST00000425718 MUC5BQ9HC84 5762 aaPredicted RBP5.52□□□□□ -1.53
APOE-202ENST00000425718 A0A0A0MQY5 61 aa5.34□□□□□ -1.55
APOE-202ENST00000425718 H3BS24 57 aa5.27□□□□□ -1.57
APOE-202ENST00000425718 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.19□□□□□ -1.58
APOE-202ENST00000425718 INE1O15225 51 aa5.16□□□□□ -1.58
APOE-202ENST00000425718 KRTAP5-11Q6L8G4 156 aa5.01□□□□□ -1.61
APOE-202ENST00000425718 LCE1FQ5T754 118 aa4.79□□□□□ -1.64
APOE-202ENST00000425718 KRTAP21-2Q3LI59 83 aa4.74□□□□□ -1.65
APOE-202ENST00000425718 KRTAP4-12Q9BQ66 201 aa4.74□□□□□ -1.65
APOE-202ENST00000425718 PRM1P04553 51 aa4.66□□□□□ -1.66
APOE-202ENST00000425718 PHGR1C9JFL3 82 aa4.28□□□□□ -1.72
APOE-202ENST00000425718 KRTAP4-4Q9BYR3 166 aa4.18□□□□□ -1.74
APOE-202ENST00000425718 MUC19Q7Z5P9 8384 aa3.77□□□□□ -1.81
APOE-202ENST00000425718 KRTAP21-1Q3LI58 79 aa2.96□□□□□ -1.94
APOE-202ENST00000425718 MUC16Q8WXI7 14507 aa2.81□□□□□ -1.96
Retrieved 78 of 20,778 RNA–protein pairs in 6.3 ms