RNA–Protein interactions for RNA: ENST00000424135.5

PLOD3-204, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 5

Gene PLOD3, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-204ENST00000424135 MT1LQ93083 61 aa4.15□□□□□ -1.75
PLOD3-204ENST00000424135 PP632Q6XCG6 107 aa4.14□□□□□ -1.75
PLOD3-204ENST00000424135 KRTAP12-1P59990 96 aa4.13□□□□□ -1.75
PLOD3-204ENST00000424135 KRTAP5-3Q6L8H2 238 aa4.13□□□□□ -1.75
PLOD3-204ENST00000424135 SVIPQ8NHG7 77 aa4.11□□□□□ -1.75
PLOD3-204ENST00000424135 LINC01558Q9Y6Z2 57 aa4.11□□□□□ -1.75
PLOD3-204ENST00000424135 SMIM26A0A096LP01 95 aa4.08□□□□□ -1.76
PLOD3-204ENST00000424135 A8MU10 97 aa4.08□□□□□ -1.76
PLOD3-204ENST00000424135 PCP4P48539 62 aa4.07□□□□□ -1.76
PLOD3-204ENST00000424135 SPINT4Q6UDR6 99 aa4.07□□□□□ -1.76
PLOD3-204ENST00000424135 PRR15LQ9BU68 103 aa4.07□□□□□ -1.76
PLOD3-204ENST00000424135 KRTAP4-7Q9BYR0 210 aa4.01□□□□□ -1.77
PLOD3-204ENST00000424135 C10orf95Q9H7T3 257 aa4.01□□□□□ -1.77
PLOD3-204ENST00000424135 LCE3AQ5TA76 89 aa4□□□□□ -1.77
PLOD3-204ENST00000424135 UQCR11O14957 56 aa3.97□□□□□ -1.77
PLOD3-204ENST00000424135 KRTAP20-2Q3LI61 65 aa3.96□□□□□ -1.78
PLOD3-204ENST00000424135 SYNE1Q8NF91 8797 aaKnown RBP3.94□□□□□ -1.78
PLOD3-204ENST00000424135 Q1T7F1 81 aa3.94□□□□□ -1.78
PLOD3-204ENST00000424135 V9GYY9 64 aa3.91□□□□□ -1.78
PLOD3-204ENST00000424135 PSPHP1O15172 72 aa3.89□□□□□ -1.79
PLOD3-204ENST00000424135 KRTAP5-5Q701N2 237 aaPredicted RBP3.89□□□□□ -1.79
PLOD3-204ENST00000424135 MIR22HGQ0VDD5 57 aa3.88□□□□□ -1.79
PLOD3-204ENST00000424135 AHNAKQ09666 5890 aaKnown RBP3.86□□□□□ -1.79
PLOD3-204ENST00000424135 TNP1P09430 55 aa3.86□□□□□ -1.79
PLOD3-204ENST00000424135 RPS28P62857 69 aaKnown RBP3.85□□□□□ -1.79
PLOD3-204ENST00000424135 LOC100996750A0A140TA64 210 aa3.81□□□□□ -1.8
PLOD3-204ENST00000424135 KRTAP12-3P60328 96 aa3.81□□□□□ -1.8
PLOD3-204ENST00000424135 KRTAP12-4P60329 112 aa3.78□□□□□ -1.8
PLOD3-204ENST00000424135 MUC5ACP98088 5654 aa3.77□□□□□ -1.81
PLOD3-204ENST00000424135 A6NED7 52 aa3.75□□□□□ -1.81
PLOD3-204ENST00000424135 K7ERS5 55 aa3.74□□□□□ -1.81
PLOD3-204ENST00000424135 MUC5BQ9HC84 5762 aaPredicted RBP3.73□□□□□ -1.81
PLOD3-204ENST00000424135 KRTAP25-1Q3LHN0 102 aa3.72□□□□□ -1.81
PLOD3-204ENST00000424135 H3BS24 57 aa3.71□□□□□ -1.82
PLOD3-204ENST00000424135 KRTAP4-11Q9BYQ6 195 aa3.67□□□□□ -1.82
PLOD3-204ENST00000424135 CDC42SE1Q9NRR8 79 aa3.63□□□□□ -1.83
PLOD3-204ENST00000424135 KRTAP23-1A1A580 65 aa3.61□□□□□ -1.83
PLOD3-204ENST00000424135 KRTAP5-2Q701N4 177 aa3.61□□□□□ -1.83
PLOD3-204ENST00000424135 KRTAP5-8O75690 187 aa3.58□□□□□ -1.84
PLOD3-204ENST00000424135 ROMO1P60602 79 aa3.56□□□□□ -1.84
PLOD3-204ENST00000424135 KRTAP6-1Q3LI64 71 aa3.55□□□□□ -1.84
PLOD3-204ENST00000424135 MT1AP04731 61 aa3.5□□□□□ -1.85
PLOD3-204ENST00000424135 OBSCNQ5VST9 7968 aa3.48□□□□□ -1.85
PLOD3-204ENST00000424135 KRTAP19-4Q3LI73 84 aa3.48□□□□□ -1.85
PLOD3-204ENST00000424135 KRTAP15-1Q3LI76 137 aa3.48□□□□□ -1.85
PLOD3-204ENST00000424135 LCE3CQ5T5A8 94 aa3.47□□□□□ -1.85
PLOD3-204ENST00000424135 KRTAP9-9Q9BYP9 154 aa3.46□□□□□ -1.86
PLOD3-204ENST00000424135 KRTAP6-2Q3LI66 62 aa3.44□□□□□ -1.86
PLOD3-204ENST00000424135 KRTAP9-4Q9BYQ2 154 aa3.42□□□□□ -1.86
PLOD3-204ENST00000424135 KRTAP9-6A8MVA2 160 aa3.39□□□□□ -1.87
PLOD3-204ENST00000424135 PRO0628Q9UI54 55 aa3.38□□□□□ -1.87
PLOD3-204ENST00000424135 BRK1Q8WUW1 75 aa3.36□□□□□ -1.87
PLOD3-204ENST00000424135 KRTAP5-1Q6L8H4 278 aa3.3□□□□□ -1.88
PLOD3-204ENST00000424135 MT3P25713 68 aa3.19□□□□□ -1.9
PLOD3-204ENST00000424135 PMAIP1Q13794 54 aa3.17□□□□□ -1.9
PLOD3-204ENST00000424135 KTN1-AS1Q86SY8 53 aa3.05□□□□□ -1.92
PLOD3-204ENST00000424135 PRAC1Q96KF2 57 aa3.04□□□□□ -1.92
PLOD3-204ENST00000424135 LCE1EQ5T753 118 aa2.98□□□□□ -1.93
PLOD3-204ENST00000424135 KRTAP4-2Q9BYR5 136 aa2.93□□□□□ -1.94
PLOD3-204ENST00000424135 LCE1BQ5T7P3 118 aa2.9□□□□□ -1.95
PLOD3-204ENST00000424135 KRTAP4-12Q9BQ66 201 aa2.86□□□□□ -1.95
PLOD3-204ENST00000424135 A0A0A0MQY5 61 aa2.84□□□□□ -1.95
PLOD3-204ENST00000424135 LCE1CQ5T751 118 aa2.78□□□□□ -1.96
PLOD3-204ENST00000424135 KRTAP5-11Q6L8G4 156 aa2.59□□□□□ -1.99
PLOD3-204ENST00000424135 PHGR1C9JFL3 82 aa2.57□□□□□ -2
PLOD3-204ENST00000424135 LCE1FQ5T754 118 aa2.51□□□□□ -2.01
PLOD3-204ENST00000424135 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.5□□□□□ -2.01
PLOD3-204ENST00000424135 LUZP6Q538Z0 58 aa2.49□□□□□ -2.01
PLOD3-204ENST00000424135 LCE3DQ9BYE3 92 aa2.46□□□□□ -2.02
PLOD3-204ENST00000424135 NDUFAF8A1L188 74 aa2.4□□□□□ -2.03
PLOD3-204ENST00000424135 KRTAP21-2Q3LI59 83 aa2.35□□□□□ -2.03
PLOD3-204ENST00000424135 LCE3EQ5T5B0 92 aa2.34□□□□□ -2.03
PLOD3-204ENST00000424135 KRTAP4-4Q9BYR3 166 aa2.24□□□□□ -2.05
PLOD3-204ENST00000424135 MUC19Q7Z5P9 8384 aa2.21□□□□□ -2.06
PLOD3-204ENST00000424135 INE1O15225 51 aa2.12□□□□□ -2.07
PLOD3-204ENST00000424135 KRTAP21-1Q3LI58 79 aa1.96□□□□□ -2.1
PLOD3-204ENST00000424135 PRM1P04553 51 aa1.83□□□□□ -2.12
PLOD3-204ENST00000424135 MUC16Q8WXI7 14507 aa1.54□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 137.8 ms