RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 KRTAP2-3P0C7H8 128 aa4.23□□□□□ -1.73
USP49-204ENST00000423567 KRTAP2-4Q9BYR9 128 aa4.23□□□□□ -1.73
USP49-204ENST00000423567 LINC01558Q9Y6Z2 57 aa4.22□□□□□ -1.73
USP49-204ENST00000423567 A8MU10 97 aa4.21□□□□□ -1.74
USP49-204ENST00000423567 SPRR2DP22532 72 aa4.19□□□□□ -1.74
USP49-204ENST00000423567 PCP4P48539 62 aa4.14□□□□□ -1.75
USP49-204ENST00000423567 UQCR11O14957 56 aa4.13□□□□□ -1.75
USP49-204ENST00000423567 A0A0A0MQY5 61 aa4.11□□□□□ -1.75
USP49-204ENST00000423567 KRTAP2-1Q9BYU5 128 aa4.1□□□□□ -1.75
USP49-204ENST00000423567 TNP1P09430 55 aa4.08□□□□□ -1.76
USP49-204ENST00000423567 KRTAP19-7Q3SYF9 63 aa4.08□□□□□ -1.76
USP49-204ENST00000423567 V9GYY9 64 aa4.07□□□□□ -1.76
USP49-204ENST00000423567 MT1EP04732 61 aa4.06□□□□□ -1.76
USP49-204ENST00000423567 C10orf95Q9H7T3 257 aa4.06□□□□□ -1.76
USP49-204ENST00000423567 MIR22HGQ0VDD5 57 aa4.04□□□□□ -1.76
USP49-204ENST00000423567 KRTAP19-5Q3LI72 72 aa4.03□□□□□ -1.76
USP49-204ENST00000423567 KRTAP19-3Q7Z4W3 81 aa4.02□□□□□ -1.77
USP49-204ENST00000423567 K7ERS5 55 aa4.01□□□□□ -1.77
USP49-204ENST00000423567 SVIPQ8NHG7 77 aa4.01□□□□□ -1.77
USP49-204ENST00000423567 PSPHP1O15172 72 aa4□□□□□ -1.77
USP49-204ENST00000423567 Q1T7F1 81 aa3.99□□□□□ -1.77
USP49-204ENST00000423567 LCE3AQ5TA76 89 aa3.98□□□□□ -1.77
USP49-204ENST00000423567 MT1GP13640 62 aa3.95□□□□□ -1.78
USP49-204ENST00000423567 PP632Q6XCG6 107 aa3.95□□□□□ -1.78
USP49-204ENST00000423567 MT1LQ93083 61 aa3.9□□□□□ -1.79
USP49-204ENST00000423567 A6NED7 52 aa3.89□□□□□ -1.79
USP49-204ENST00000423567 KRTAP25-1Q3LHN0 102 aa3.89□□□□□ -1.79
USP49-204ENST00000423567 LCE1FQ5T754 118 aa3.89□□□□□ -1.79
USP49-204ENST00000423567 MT1MQ8N339 61 aa3.86□□□□□ -1.79
USP49-204ENST00000423567 KRTAP12-3P60328 96 aa3.85□□□□□ -1.79
USP49-204ENST00000423567 RPS28P62857 69 aaKnown RBP3.85□□□□□ -1.79
USP49-204ENST00000423567 DSTQ03001 7570 aaKnown RBP3.79□□□□□ -1.8
USP49-204ENST00000423567 KRTAP9-6A8MVA2 160 aa3.78□□□□□ -1.8
USP49-204ENST00000423567 CDC42SE1Q9NRR8 79 aa3.78□□□□□ -1.8
USP49-204ENST00000423567 KRTAP5-1Q6L8H4 278 aa3.76□□□□□ -1.81
USP49-204ENST00000423567 KRTAP4-3Q9BYR4 195 aa3.74□□□□□ -1.81
USP49-204ENST00000423567 ROMO1P60602 79 aa3.69□□□□□ -1.82
USP49-204ENST00000423567 LCE3CQ5T5A8 94 aa3.66□□□□□ -1.82
USP49-204ENST00000423567 MT4P47944 62 aa3.64□□□□□ -1.83
USP49-204ENST00000423567 KRTAP5-4Q6L8H1 288 aa3.61□□□□□ -1.83
USP49-204ENST00000423567 KRTAP4-4Q9BYR3 166 aa3.59□□□□□ -1.83
USP49-204ENST00000423567 HMCN1Q96RW7 5635 aa3.57□□□□□ -1.84
USP49-204ENST00000423567 KRTAP5-5Q701N2 237 aaPredicted RBP3.51□□□□□ -1.85
USP49-204ENST00000423567 GPR98Q8WXG9 6306 aa3.51□□□□□ -1.85
USP49-204ENST00000423567 NDUFAF8A1L188 74 aa3.47□□□□□ -1.85
USP49-204ENST00000423567 KRTAP12-4P60329 112 aa3.46□□□□□ -1.86
USP49-204ENST00000423567 SPRR5A0A1B0GTR4 108 aa3.43□□□□□ -1.86
USP49-204ENST00000423567 BRK1Q8WUW1 75 aa3.43□□□□□ -1.86
USP49-204ENST00000423567 KRTAP20-2Q3LI61 65 aa3.42□□□□□ -1.86
USP49-204ENST00000423567 AHNAK2Q8IVF2 5795 aa3.38□□□□□ -1.87
USP49-204ENST00000423567 PRAC1Q96KF2 57 aa3.38□□□□□ -1.87
USP49-204ENST00000423567 SYNE1Q8NF91 8797 aaKnown RBP3.35□□□□□ -1.87
USP49-204ENST00000423567 LCE3EQ5T5B0 92 aa3.34□□□□□ -1.87
USP49-204ENST00000423567 KRTAP5-10Q6L8G5 202 aa3.34□□□□□ -1.87
USP49-204ENST00000423567 MT1AP04731 61 aa3.33□□□□□ -1.88
USP49-204ENST00000423567 KRTAP6-1Q3LI64 71 aa3.28□□□□□ -1.88
USP49-204ENST00000423567 PMAIP1Q13794 54 aa3.23□□□□□ -1.89
USP49-204ENST00000423567 OBSCNQ5VST9 7968 aa3.22□□□□□ -1.89
USP49-204ENST00000423567 KRTAP5-7Q6L8G8 165 aa3.21□□□□□ -1.9
USP49-204ENST00000423567 KRTAP5-2Q701N4 177 aa3.18□□□□□ -1.9
USP49-204ENST00000423567 KRTAP6-2Q3LI66 62 aa3.13□□□□□ -1.91
USP49-204ENST00000423567 PRO0628Q9UI54 55 aa3.09□□□□□ -1.91
USP49-204ENST00000423567 KRTAP5-8O75690 187 aa2.98□□□□□ -1.93
USP49-204ENST00000423567 KTN1-AS1Q86SY8 53 aa2.89□□□□□ -1.95
USP49-204ENST00000423567 LCE1CQ5T751 118 aa2.8□□□□□ -1.96
USP49-204ENST00000423567 LCE1BQ5T7P3 118 aa2.8□□□□□ -1.96
USP49-204ENST00000423567 MUC5BQ9HC84 5762 aaPredicted RBP2.78□□□□□ -1.96
USP49-204ENST00000423567 AHNAKQ09666 5890 aaKnown RBP2.78□□□□□ -1.97
USP49-204ENST00000423567 MUC5ACP98088 5654 aa2.76□□□□□ -1.97
USP49-204ENST00000423567 LUZP6Q538Z0 58 aa2.65□□□□□ -1.99
USP49-204ENST00000423567 LCE3DQ9BYE3 92 aa2.65□□□□□ -1.99
USP49-204ENST00000423567 MUC19Q7Z5P9 8384 aa2.26□□□□□ -2.05
USP49-204ENST00000423567 KRTAP21-2Q3LI59 83 aa2.15□□□□□ -2.07
USP49-204ENST00000423567 PHGR1C9JFL3 82 aa1.99□□□□□ -2.09
USP49-204ENST00000423567 INE1O15225 51 aa1.89□□□□□ -2.11
USP49-204ENST00000423567 PRM1P04553 51 aa1.88□□□□□ -2.11
USP49-204ENST00000423567 KRTAP21-1Q3LI58 79 aa1.5□□□□□ -2.17
USP49-204ENST00000423567 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 93 ms