RNA–Protein interactions for RNA: ENST00000423327.2

SPC24-201, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 840 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-201ENST00000423327 A6NED7 52 aa5.53□□□□□ -1.52
SPC24-201ENST00000423327 MIR22HGQ0VDD5 57 aa5.53□□□□□ -1.52
SPC24-201ENST00000423327 MT1LQ93083 61 aa5.53□□□□□ -1.52
SPC24-201ENST00000423327 MT1MQ8N339 61 aa5.51□□□□□ -1.53
SPC24-201ENST00000423327 KRTAP4-9Q9BYQ8 210 aa5.48□□□□□ -1.53
SPC24-201ENST00000423327 TNP1P09430 55 aa5.47□□□□□ -1.53
SPC24-201ENST00000423327 CDC42SE1Q9NRR8 79 aa5.46□□□□□ -1.54
SPC24-201ENST00000423327 PP632Q6XCG6 107 aa5.45□□□□□ -1.54
SPC24-201ENST00000423327 KRTAP4-3Q9BYR4 195 aa5.42□□□□□ -1.54
SPC24-201ENST00000423327 GPR98Q8WXG9 6306 aa5.37□□□□□ -1.55
SPC24-201ENST00000423327 LCE1DQ5T752 114 aa5.36□□□□□ -1.55
SPC24-201ENST00000423327 BRK1Q8WUW1 75 aa5.36□□□□□ -1.55
SPC24-201ENST00000423327 HMCN1Q96RW7 5635 aa5.31□□□□□ -1.56
SPC24-201ENST00000423327 LCE4AQ5TA78 99 aa5.31□□□□□ -1.56
SPC24-201ENST00000423327 KRTAP12-3P60328 96 aa5.29□□□□□ -1.56
SPC24-201ENST00000423327 KRTAP4-7Q9BYR0 210 aa5.29□□□□□ -1.56
SPC24-201ENST00000423327 K7ERS5 55 aa5.27□□□□□ -1.57
SPC24-201ENST00000423327 MT4P47944 62 aa5.27□□□□□ -1.57
SPC24-201ENST00000423327 KRTAP5-4Q6L8H1 288 aa5.27□□□□□ -1.57
SPC24-201ENST00000423327 PRO0628Q9UI54 55 aa5.22□□□□□ -1.57
SPC24-201ENST00000423327 KRTAP4-6Q9BYQ5 205 aa5.17□□□□□ -1.58
SPC24-201ENST00000423327 KRTAP25-1Q3LHN0 102 aa5.16□□□□□ -1.58
SPC24-201ENST00000423327 AHNAK2Q8IVF2 5795 aa5.16□□□□□ -1.58
SPC24-201ENST00000423327 PMAIP1Q13794 54 aa5.09□□□□□ -1.59
SPC24-201ENST00000423327 KRTAP5-5Q701N2 237 aaPredicted RBP5.08□□□□□ -1.6
SPC24-201ENST00000423327 ROMO1P60602 79 aa5.07□□□□□ -1.6
SPC24-201ENST00000423327 LOC100996750A0A140TA64 210 aa5.01□□□□□ -1.61
SPC24-201ENST00000423327 KRTAP5-10Q6L8G5 202 aa5□□□□□ -1.61
SPC24-201ENST00000423327 KRTAP20-2Q3LI61 65 aa4.97□□□□□ -1.61
SPC24-201ENST00000423327 KRTAP23-1A1A580 65 aa4.96□□□□□ -1.62
SPC24-201ENST00000423327 SYNE1Q8NF91 8797 aaKnown RBP4.94□□□□□ -1.62
SPC24-201ENST00000423327 KRTAP15-1Q3LI76 137 aa4.93□□□□□ -1.62
SPC24-201ENST00000423327 KRTAP19-4Q3LI73 84 aa4.91□□□□□ -1.62
SPC24-201ENST00000423327 SPRR5A0A1B0GTR4 108 aa4.9□□□□□ -1.63
SPC24-201ENST00000423327 LCE3CQ5T5A8 94 aa4.87□□□□□ -1.63
SPC24-201ENST00000423327 KRTAP5-3Q6L8H2 238 aa4.87□□□□□ -1.63
SPC24-201ENST00000423327 KRTAP12-4P60329 112 aa4.84□□□□□ -1.63
SPC24-201ENST00000423327 KTN1-AS1Q86SY8 53 aa4.83□□□□□ -1.64
SPC24-201ENST00000423327 KRTAP5-7Q6L8G8 165 aa4.78□□□□□ -1.64
SPC24-201ENST00000423327 PRAC1Q96KF2 57 aa4.77□□□□□ -1.65
SPC24-201ENST00000423327 KRTAP9-6A8MVA2 160 aa4.69□□□□□ -1.66
SPC24-201ENST00000423327 MT1AP04731 61 aa4.69□□□□□ -1.66
SPC24-201ENST00000423327 KRTAP6-1Q3LI64 71 aa4.69□□□□□ -1.66
SPC24-201ENST00000423327 KRTAP5-2Q701N4 177 aa4.63□□□□□ -1.67
SPC24-201ENST00000423327 KRTAP9-4Q9BYQ2 154 aa4.52□□□□□ -1.69
SPC24-201ENST00000423327 KRTAP4-11Q9BYQ6 195 aa4.52□□□□□ -1.69
SPC24-201ENST00000423327 SVIPQ8NHG7 77 aa4.48□□□□□ -1.69
SPC24-201ENST00000423327 KRTAP6-2Q3LI66 62 aa4.46□□□□□ -1.7
SPC24-201ENST00000423327 KRTAP5-8O75690 187 aa4.4□□□□□ -1.71
SPC24-201ENST00000423327 OBSCNQ5VST9 7968 aa4.36□□□□□ -1.71
SPC24-201ENST00000423327 MT3P25713 68 aa4.25□□□□□ -1.73
SPC24-201ENST00000423327 MUC5BQ9HC84 5762 aaPredicted RBP4.25□□□□□ -1.73
SPC24-201ENST00000423327 AHNAKQ09666 5890 aaKnown RBP4.23□□□□□ -1.73
SPC24-201ENST00000423327 MUC5ACP98088 5654 aa4.2□□□□□ -1.74
SPC24-201ENST00000423327 KRTAP5-1Q6L8H4 278 aa4.15□□□□□ -1.75
SPC24-201ENST00000423327 KRTAP9-9Q9BYP9 154 aa4.09□□□□□ -1.75
SPC24-201ENST00000423327 LCE1EQ5T753 118 aa3.91□□□□□ -1.78
SPC24-201ENST00000423327 LUZP6Q538Z0 58 aa3.89□□□□□ -1.79
SPC24-201ENST00000423327 KRTAP4-2Q9BYR5 136 aa3.77□□□□□ -1.81
SPC24-201ENST00000423327 NDUFAF8A1L188 74 aa3.71□□□□□ -1.82
SPC24-201ENST00000423327 LCE1BQ5T7P3 118 aa3.69□□□□□ -1.82
SPC24-201ENST00000423327 LCE1CQ5T751 118 aa3.64□□□□□ -1.83
SPC24-201ENST00000423327 KRTAP4-12Q9BQ66 201 aa3.6□□□□□ -1.83
SPC24-201ENST00000423327 LCE3DQ9BYE3 92 aa3.48□□□□□ -1.85
SPC24-201ENST00000423327 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.33□□□□□ -1.88
SPC24-201ENST00000423327 KRTAP5-11Q6L8G4 156 aa3.32□□□□□ -1.88
SPC24-201ENST00000423327 LCE3EQ5T5B0 92 aa3.27□□□□□ -1.89
SPC24-201ENST00000423327 A0A0A0MQY5 61 aa3.2□□□□□ -1.9
SPC24-201ENST00000423327 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
SPC24-201ENST00000423327 KRTAP21-2Q3LI59 83 aa3.1□□□□□ -1.91
SPC24-201ENST00000423327 INE1O15225 51 aa3.08□□□□□ -1.92
SPC24-201ENST00000423327 H3BS24 57 aa2.95□□□□□ -1.94
SPC24-201ENST00000423327 PHGR1C9JFL3 82 aa2.87□□□□□ -1.95
SPC24-201ENST00000423327 KRTAP4-4Q9BYR3 166 aa2.83□□□□□ -1.96
SPC24-201ENST00000423327 MUC19Q7Z5P9 8384 aa2.68□□□□□ -1.98
SPC24-201ENST00000423327 PRM1P04553 51 aa2.62□□□□□ -1.99
SPC24-201ENST00000423327 KRTAP21-1Q3LI58 79 aa2.16□□□□□ -2.06
SPC24-201ENST00000423327 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 181 ms