RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-206	ENST00000423161	TNP1	P09430	55 aa		6.42	□□□□□ -1.38
SREBF1-206	ENST00000423161	KRTAP5-4	Q6L8H1	288 aa		6.4	□□□□□ -1.38
SREBF1-206	ENST00000423161	AHNAK2	Q8IVF2	5795 aa		6.37	□□□□□ -1.39
SREBF1-206	ENST00000423161	KRTAP5-10	Q6L8G5	202 aa		6.26	□□□□□ -1.41
SREBF1-206	ENST00000423161	KRTAP4-7	Q9BYR0	210 aa		6.23	□□□□□ -1.41
SREBF1-206	ENST00000423161	KRTAP12-3	P60328	96 aa		6.21	□□□□□ -1.42
SREBF1-206	ENST00000423161	PRR15L	Q9BU68	103 aa		6.21	□□□□□ -1.42
SREBF1-206	ENST00000423161	ANAPC13	Q9BS18	74 aa		6.18	□□□□□ -1.42
SREBF1-206	ENST00000423161	LINC01558	Q9Y6Z2	57 aa		6.09	□□□□□ -1.43
SREBF1-206	ENST00000423161	ATP5E	P56381	51 aa	Predicted RBP	6.08	□□□□□ -1.44
SREBF1-206	ENST00000423161	KRTAP5-3	Q6L8H2	238 aa		6.08	□□□□□ -1.44
SREBF1-206	ENST00000423161	CCDC179	H3BU77	68 aa		6.07	□□□□□ -1.44
SREBF1-206	ENST00000423161	KRTAP20-2	Q3LI61	65 aa		6.07	□□□□□ -1.44
SREBF1-206	ENST00000423161	KRTAP5-7	Q6L8G8	165 aa		6.05	□□□□□ -1.44
SREBF1-206	ENST00000423161	KRTAP5-5	Q701N2	237 aa	Predicted RBP	6.05	□□□□□ -1.44
SREBF1-206	ENST00000423161	SPRR5	A0A1B0GTR4	108 aa		6	□□□□□ -1.45
SREBF1-206	ENST00000423161	UQCR11	O14957	56 aa		6	□□□□□ -1.45
SREBF1-206	ENST00000423161	KRTAP12-4	P60329	112 aa		5.96	□□□□□ -1.46
SREBF1-206	ENST00000423161	KRTAP25-1	Q3LHN0	102 aa		5.95	□□□□□ -1.46
SREBF1-206	ENST00000423161		H3BS24	57 aa		5.87	□□□□□ -1.47
SREBF1-206	ENST00000423161	SYNE1	Q8NF91	8797 aa	Known RBP	5.86	□□□□□ -1.47
SREBF1-206	ENST00000423161	MIR22HG	Q0VDD5	57 aa		5.84	□□□□□ -1.47
SREBF1-206	ENST00000423161	KRTAP4-12	Q9BQ66	201 aa		5.83	□□□□□ -1.48
SREBF1-206	ENST00000423161	TMEM258	P61165	79 aa		5.82	□□□□□ -1.48
SREBF1-206	ENST00000423161	KRTAP19-4	Q3LI73	84 aa		5.82	□□□□□ -1.48
SREBF1-206	ENST00000423161		K7ERS5	55 aa		5.78	□□□□□ -1.48
SREBF1-206	ENST00000423161	PCP4	P48539	62 aa		5.73	□□□□□ -1.49
SREBF1-206	ENST00000423161	KRTAP15-1	Q3LI76	137 aa		5.73	□□□□□ -1.49
SREBF1-206	ENST00000423161	KRTAP23-1	A1A580	65 aa		5.69	□□□□□ -1.5
SREBF1-206	ENST00000423161	LCE3C	Q5T5A8	94 aa		5.69	□□□□□ -1.5
SREBF1-206	ENST00000423161	SVIP	Q8NHG7	77 aa		5.64	□□□□□ -1.51
SREBF1-206	ENST00000423161	KRTAP9-9	Q9BYP9	154 aa		5.63	□□□□□ -1.51
SREBF1-206	ENST00000423161	KRTAP9-4	Q9BYQ2	154 aa		5.63	□□□□□ -1.51
SREBF1-206	ENST00000423161	PSPHP1	O15172	72 aa		5.6	□□□□□ -1.51
SREBF1-206	ENST00000423161	MT1A	P04731	61 aa		5.58	□□□□□ -1.52
SREBF1-206	ENST00000423161	KRTAP4-11	Q9BYQ6	195 aa		5.58	□□□□□ -1.52
SREBF1-206	ENST00000423161	KRTAP6-1	Q3LI64	71 aa		5.57	□□□□□ -1.52
SREBF1-206	ENST00000423161	KRTAP5-2	Q701N4	177 aa		5.57	□□□□□ -1.52
SREBF1-206	ENST00000423161		V9GYY9	64 aa		5.56	□□□□□ -1.52
SREBF1-206	ENST00000423161		Q1T7F1	81 aa		5.5	□□□□□ -1.53
SREBF1-206	ENST00000423161	CDC42SE1	Q9NRR8	79 aa		5.44	□□□□□ -1.54
SREBF1-206	ENST00000423161		A6NED7	52 aa		5.4	□□□□□ -1.54
SREBF1-206	ENST00000423161	KRTAP5-8	O75690	187 aa		5.4	□□□□□ -1.54
SREBF1-206	ENST00000423161	KRTAP9-6	A8MVA2	160 aa		5.38	□□□□□ -1.55
SREBF1-206	ENST00000423161	RPS28	P62857	69 aa	Known RBP	5.37	□□□□□ -1.55
SREBF1-206	ENST00000423161	KRTAP6-2	Q3LI66	62 aa		5.36	□□□□□ -1.55
SREBF1-206	ENST00000423161	ROMO1	P60602	79 aa		5.33	□□□□□ -1.56
SREBF1-206	ENST00000423161	OBSCN	Q5VST9	7968 aa		5.26	□□□□□ -1.57
SREBF1-206	ENST00000423161	MUC5AC	P98088	5654 aa		5.26	□□□□□ -1.57
SREBF1-206	ENST00000423161	AHNAK	Q09666	5890 aa	Known RBP	5.25	□□□□□ -1.57
SREBF1-206	ENST00000423161	MUC5B	Q9HC84	5762 aa	Predicted RBP	5.22	□□□□□ -1.57
SREBF1-206	ENST00000423161	MT3	P25713	68 aa		5.11	□□□□□ -1.59
SREBF1-206	ENST00000423161	KRTAP4-2	Q9BYR5	136 aa		5.07	□□□□□ -1.6
SREBF1-206	ENST00000423161	KRTAP5-1	Q6L8H4	278 aa		5.03	□□□□□ -1.6
SREBF1-206	ENST00000423161	LCE1E	Q5T753	118 aa		4.73	□□□□□ -1.65
SREBF1-206	ENST00000423161	PRO0628	Q9UI54	55 aa		4.68	□□□□□ -1.66
SREBF1-206	ENST00000423161	BRK1	Q8WUW1	75 aa		4.55	□□□□□ -1.68
SREBF1-206	ENST00000423161	LCE1B	Q5T7P3	118 aa		4.5	□□□□□ -1.69
SREBF1-206	ENST00000423161	PMAIP1	Q13794	54 aa		4.41	□□□□□ -1.7
SREBF1-206	ENST00000423161	LCE1C	Q5T751	118 aa		4.4	□□□□□ -1.71
SREBF1-206	ENST00000423161	KTN1-AS1	Q86SY8	53 aa		4.25	□□□□□ -1.73
SREBF1-206	ENST00000423161	PRAC1	Q96KF2	57 aa		4.15	□□□□□ -1.75
SREBF1-206	ENST00000423161	LCE3D	Q9BYE3	92 aa		4.06	□□□□□ -1.76
SREBF1-206	ENST00000423161	KRTAP5-11	Q6L8G4	156 aa		4.01	□□□□□ -1.77
SREBF1-206	ENST00000423161	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.97	□□□□□ -1.77
SREBF1-206	ENST00000423161	LCE1F	Q5T754	118 aa		3.94	□□□□□ -1.78
SREBF1-206	ENST00000423161	LCE3E	Q5T5B0	92 aa		3.78	□□□□□ -1.8
SREBF1-206	ENST00000423161	PHGR1	C9JFL3	82 aa		3.67	□□□□□ -1.82
SREBF1-206	ENST00000423161	KRTAP21-2	Q3LI59	83 aa		3.66	□□□□□ -1.82
SREBF1-206	ENST00000423161		A0A0A0MQY5	61 aa		3.54	□□□□□ -1.84
SREBF1-206	ENST00000423161	LUZP6	Q538Z0	58 aa		3.44	□□□□□ -1.86
SREBF1-206	ENST00000423161	NDUFAF8	A1L188	74 aa		3.42	□□□□□ -1.86
SREBF1-206	ENST00000423161	KRTAP4-4	Q9BYR3	166 aa		3.4	□□□□□ -1.87
SREBF1-206	ENST00000423161	MUC19	Q7Z5P9	8384 aa		3.27	□□□□□ -1.89
SREBF1-206	ENST00000423161	INE1	O15225	51 aa		2.88	□□□□□ -1.95
SREBF1-206	ENST00000423161	KRTAP21-1	Q3LI58	79 aa		2.78	□□□□□ -1.96
SREBF1-206	ENST00000423161	PRM1	P04553	51 aa		2.72	□□□□□ -1.97
SREBF1-206	ENST00000423161	MUC16	Q8WXI7	14507 aa		2.31	□□□□□ -2.04

Retrieved 78 of 20,778 RNA–protein pairs in 322.2 ms