RNA–Protein interactions for RNA: ENST00000423041.6

PAPD4-202, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAPD4, Length 3,223 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-202ENST00000423041 LCE1DQ5T752 114 aa3.34□□□□□ -1.87
PAPD4-202ENST00000423041 KRTAP4-9Q9BYQ8 210 aa3.34□□□□□ -1.88
PAPD4-202ENST00000423041 CRCT1Q9UGL9 99 aa3.34□□□□□ -1.88
PAPD4-202ENST00000423041 KRTAP4-2Q9BYR5 136 aa3.32□□□□□ -1.88
PAPD4-202ENST00000423041 KRTAP9-6A8MVA2 160 aa3.3□□□□□ -1.88
PAPD4-202ENST00000423041 MT1XP80297 61 aa3.29□□□□□ -1.88
PAPD4-202ENST00000423041 FCGBPQ9Y6R7 5405 aaPredicted RBP3.28□□□□□ -1.88
PAPD4-202ENST00000423041 KRTAP10-7P60409 375 aaPredicted RBP3.27□□□□□ -1.89
PAPD4-202ENST00000423041 KRTAP19-6Q3LI70 58 aa3.26□□□□□ -1.89
PAPD4-202ENST00000423041 KMT2DO14686 5537 aa3.24□□□□□ -1.89
PAPD4-202ENST00000423041 KRTAP5-3Q6L8H2 238 aa3.23□□□□□ -1.89
PAPD4-202ENST00000423041 KRTAP12-4P60329 112 aa3.21□□□□□ -1.9
PAPD4-202ENST00000423041 LCE4AQ5TA78 99 aa3.21□□□□□ -1.9
PAPD4-202ENST00000423041 MACF1Q9UPN3 7388 aaKnown RBP3.21□□□□□ -1.9
PAPD4-202ENST00000423041 KRTAP19-5Q3LI72 72 aa3.2□□□□□ -1.9
PAPD4-202ENST00000423041 SYNE2Q8WXH0 6885 aaKnown RBP3.18□□□□□ -1.9
PAPD4-202ENST00000423041 LCE5AQ5TCM9 118 aa3.14□□□□□ -1.91
PAPD4-202ENST00000423041 KRTAP4-11Q9BYQ6 195 aa3.12□□□□□ -1.91
PAPD4-202ENST00000423041 KRTAP2-2Q9BYT5 123 aa3.1□□□□□ -1.91
PAPD4-202ENST00000423041 KRTAP9-7A8MTY7 169 aa3.04□□□□□ -1.92
PAPD4-202ENST00000423041 KRTAP6-3Q3LI67 103 aa3.04□□□□□ -1.92
PAPD4-202ENST00000423041 SPRR2FQ96RM1 72 aa3.04□□□□□ -1.92
PAPD4-202ENST00000423041 MUC12Q9UKN1 5478 aa3.03□□□□□ -1.92
PAPD4-202ENST00000423041 LCE1AQ5T7P2 110 aa3.03□□□□□ -1.92
PAPD4-202ENST00000423041 LCE1FQ5T754 118 aa3.01□□□□□ -1.93
PAPD4-202ENST00000423041 MDN1Q9NU22 5596 aa2.95□□□□□ -1.94
PAPD4-202ENST00000423041 DSTQ03001 7570 aaKnown RBP2.93□□□□□ -1.94
PAPD4-202ENST00000423041 KRTAP19-7Q3SYF9 63 aa2.93□□□□□ -1.94
PAPD4-202ENST00000423041 PRM1P04553 51 aa2.92□□□□□ -1.94
PAPD4-202ENST00000423041 KRTAP19-4Q3LI73 84 aa2.91□□□□□ -1.94
PAPD4-202ENST00000423041 SPRR2EP22531 72 aa2.89□□□□□ -1.95
PAPD4-202ENST00000423041 SPRR2BP35325 72 aa2.89□□□□□ -1.95
PAPD4-202ENST00000423041 SPRR2AP35326 72 aa2.89□□□□□ -1.95
PAPD4-202ENST00000423041 MT1EP04732 61 aa2.89□□□□□ -1.95
PAPD4-202ENST00000423041 LCE1EQ5T753 118 aa2.89□□□□□ -1.95
PAPD4-202ENST00000423041 KRTAP5-9P26371 169 aa2.85□□□□□ -1.95
PAPD4-202ENST00000423041 MT1LQ93083 61 aa2.83□□□□□ -1.96
PAPD4-202ENST00000423041 SYNE1Q8NF91 8797 aaKnown RBP2.83□□□□□ -1.96
PAPD4-202ENST00000423041 KRTAP19-3Q7Z4W3 81 aa2.81□□□□□ -1.96
PAPD4-202ENST00000423041 SPRR2DP22532 72 aa2.78□□□□□ -1.96
PAPD4-202ENST00000423041 MT1GP13640 62 aa2.77□□□□□ -1.97
PAPD4-202ENST00000423041 KRTAP4-3Q9BYR4 195 aa2.77□□□□□ -1.97
PAPD4-202ENST00000423041 KRTAP5-5Q701N2 237 aaPredicted RBP2.76□□□□□ -1.97
PAPD4-202ENST00000423041 NEBP20929 6669 aa2.76□□□□□ -1.97
PAPD4-202ENST00000423041 LCE3EQ5T5B0 92 aa2.75□□□□□ -1.97
PAPD4-202ENST00000423041 MT1MQ8N339 61 aa2.74□□□□□ -1.97
PAPD4-202ENST00000423041 LCE3DQ9BYE3 92 aa2.72□□□□□ -1.97
PAPD4-202ENST00000423041 MT1AP04731 61 aa2.68□□□□□ -1.98
PAPD4-202ENST00000423041 HMCN1Q96RW7 5635 aa2.64□□□□□ -1.99
PAPD4-202ENST00000423041 KRTAP20-1Q3LI63 56 aa2.62□□□□□ -1.99
PAPD4-202ENST00000423041 KRTAP6-2Q3LI66 62 aa2.61□□□□□ -1.99
PAPD4-202ENST00000423041 OBSCNQ5VST9 7968 aa2.6□□□□□ -1.99
PAPD4-202ENST00000423041 MT4P47944 62 aa2.49□□□□□ -2.01
PAPD4-202ENST00000423041 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.45□□□□□ -2.02
PAPD4-202ENST00000423041 KRTAP6-1Q3LI64 71 aa2.44□□□□□ -2.02
PAPD4-202ENST00000423041 KRTAP5-4Q6L8H1 288 aa2.33□□□□□ -2.04
PAPD4-202ENST00000423041 MUC19Q7Z5P9 8384 aa2.33□□□□□ -2.04
PAPD4-202ENST00000423041 KRTAP20-2Q3LI61 65 aa2.27□□□□□ -2.05
PAPD4-202ENST00000423041 MT3P25713 68 aa2.2□□□□□ -2.06
PAPD4-202ENST00000423041 GPR98Q8WXG9 6306 aa2.09□□□□□ -2.08
PAPD4-202ENST00000423041 KRTAP5-2Q701N4 177 aa2.08□□□□□ -2.08
PAPD4-202ENST00000423041 AHNAK2Q8IVF2 5795 aa2.07□□□□□ -2.08
PAPD4-202ENST00000423041 KRTAP5-11Q6L8G4 156 aa2.05□□□□□ -2.08
PAPD4-202ENST00000423041 MUC5BQ9HC84 5762 aaPredicted RBP2.02□□□□□ -2.09
PAPD4-202ENST00000423041 KRTAP5-10Q6L8G5 202 aa1.96□□□□□ -2.09
PAPD4-202ENST00000423041 LCE1BQ5T7P3 118 aa1.94□□□□□ -2.1
PAPD4-202ENST00000423041 LCE1CQ5T751 118 aa1.93□□□□□ -2.1
PAPD4-202ENST00000423041 KRTAP5-1Q6L8H4 278 aa1.92□□□□□ -2.1
PAPD4-202ENST00000423041 MUC5ACP98088 5654 aa1.92□□□□□ -2.1
PAPD4-202ENST00000423041 KRTAP4-4Q9BYR3 166 aa1.91□□□□□ -2.1
PAPD4-202ENST00000423041 KRTAP5-8O75690 187 aa1.9□□□□□ -2.11
PAPD4-202ENST00000423041 KRTAP21-1Q3LI58 79 aa1.85□□□□□ -2.11
PAPD4-202ENST00000423041 KRTAP5-7Q6L8G8 165 aa1.81□□□□□ -2.12
PAPD4-202ENST00000423041 AHNAKQ09666 5890 aaKnown RBP1.6□□□□□ -2.15
PAPD4-202ENST00000423041 KRTAP21-2Q3LI59 83 aa1.53□□□□□ -2.17
PAPD4-202ENST00000423041 PHGR1C9JFL3 82 aa1.33□□□□□ -2.2
PAPD4-202ENST00000423041 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 80 ms