RNA–Protein interactions for RNA: ENST00000423026.6

SNX20-203, Transcript of sorting nexin 20, humanhuman

TSL 1 (best) BASIC

Gene SNX20, Length 2,156 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-203ENST00000423026 MACF1Q9UPN3 7388 aaKnown RBP3.45□□□□□ -1.86
SNX20-203ENST00000423026 KRTAP19-6Q3LI70 58 aa3.42□□□□□ -1.86
SNX20-203ENST00000423026 KRTAP9-9Q9BYP9 154 aa3.41□□□□□ -1.86
SNX20-203ENST00000423026 KRTAP9-4Q9BYQ2 154 aa3.41□□□□□ -1.86
SNX20-203ENST00000423026 KRTAP4-2Q9BYR5 136 aa3.39□□□□□ -1.87
SNX20-203ENST00000423026 KRTAP19-5Q3LI72 72 aa3.38□□□□□ -1.87
SNX20-203ENST00000423026 KRTAP6-3Q3LI67 103 aa3.36□□□□□ -1.87
SNX20-203ENST00000423026 NEBP20929 6669 aa3.33□□□□□ -1.88
SNX20-203ENST00000423026 KMT2DO14686 5537 aa3.31□□□□□ -1.88
SNX20-203ENST00000423026 KRTAP19-7Q3SYF9 63 aa3.28□□□□□ -1.88
SNX20-203ENST00000423026 KRTAP4-9Q9BYQ8 210 aa3.26□□□□□ -1.89
SNX20-203ENST00000423026 KRTAP20-1Q3LI63 56 aa3.24□□□□□ -1.89
SNX20-203ENST00000423026 LCE3CQ5T5A8 94 aa3.24□□□□□ -1.89
SNX20-203ENST00000423026 KRTAP19-4Q3LI73 84 aa3.24□□□□□ -1.89
SNX20-203ENST00000423026 LCE1DQ5T752 114 aa3.24□□□□□ -1.89
SNX20-203ENST00000423026 MT1EP04732 61 aa3.22□□□□□ -1.89
SNX20-203ENST00000423026 KRTAP4-12Q9BQ66 201 aa3.19□□□□□ -1.9
SNX20-203ENST00000423026 MT1LQ93083 61 aa3.18□□□□□ -1.9
SNX20-203ENST00000423026 MUC12Q9UKN1 5478 aa3.15□□□□□ -1.91
SNX20-203ENST00000423026 KRTAP5-9P26371 169 aa3.1□□□□□ -1.91
SNX20-203ENST00000423026 KRTAP2-3P0C7H8 128 aa3.09□□□□□ -1.91
SNX20-203ENST00000423026 KRTAP2-4Q9BYR9 128 aa3.09□□□□□ -1.91
SNX20-203ENST00000423026 KRTAP19-3Q7Z4W3 81 aa3.08□□□□□ -1.92
SNX20-203ENST00000423026 SPRR2FQ96RM1 72 aa3.08□□□□□ -1.92
SNX20-203ENST00000423026 MT1GP13640 62 aa3.07□□□□□ -1.92
SNX20-203ENST00000423026 KRTAP2-1Q9BYU5 128 aa3.05□□□□□ -1.92
SNX20-203ENST00000423026 MDN1Q9NU22 5596 aa3.04□□□□□ -1.92
SNX20-203ENST00000423026 KRTAP9-6A8MVA2 160 aa3.04□□□□□ -1.92
SNX20-203ENST00000423026 MT1MQ8N339 61 aa3.02□□□□□ -1.93
SNX20-203ENST00000423026 LCE5AQ5TCM9 118 aa2.99□□□□□ -1.93
SNX20-203ENST00000423026 KRTAP4-11Q9BYQ6 195 aa2.98□□□□□ -1.93
SNX20-203ENST00000423026 SPRR2EP22531 72 aa2.97□□□□□ -1.93
SNX20-203ENST00000423026 SPRR2BP35325 72 aa2.97□□□□□ -1.93
SNX20-203ENST00000423026 SPRR2AP35326 72 aa2.97□□□□□ -1.93
SNX20-203ENST00000423026 KRTAP4-3Q9BYR4 195 aa2.97□□□□□ -1.93
SNX20-203ENST00000423026 KRTAP2-2Q9BYT5 123 aa2.97□□□□□ -1.93
SNX20-203ENST00000423026 GPR98Q8WXG9 6306 aa2.91□□□□□ -1.94
SNX20-203ENST00000423026 LCE1AQ5T7P2 110 aa2.9□□□□□ -1.94
SNX20-203ENST00000423026 SPRR2DP22532 72 aa2.88□□□□□ -1.95
SNX20-203ENST00000423026 DSTQ03001 7570 aaKnown RBP2.84□□□□□ -1.95
SNX20-203ENST00000423026 HMCN1Q96RW7 5635 aa2.83□□□□□ -1.96
SNX20-203ENST00000423026 KRTAP12-4P60329 112 aa2.76□□□□□ -1.97
SNX20-203ENST00000423026 MT1AP04731 61 aa2.7□□□□□ -1.98
SNX20-203ENST00000423026 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.7□□□□□ -1.98
SNX20-203ENST00000423026 KRTAP5-5Q701N2 237 aaPredicted RBP2.69□□□□□ -1.98
SNX20-203ENST00000423026 KRTAP6-1Q3LI64 71 aa2.67□□□□□ -1.98
SNX20-203ENST00000423026 SYNE1Q8NF91 8797 aaKnown RBP2.58□□□□□ -2
SNX20-203ENST00000423026 LCE4AQ5TA78 99 aa2.54□□□□□ -2
SNX20-203ENST00000423026 AHNAK2Q8IVF2 5795 aa2.53□□□□□ -2
SNX20-203ENST00000423026 MT4P47944 62 aa2.52□□□□□ -2.01
SNX20-203ENST00000423026 KRTAP5-10Q6L8G5 202 aa2.52□□□□□ -2.01
SNX20-203ENST00000423026 KRTAP5-4Q6L8H1 288 aa2.5□□□□□ -2.01
SNX20-203ENST00000423026 KRTAP5-7Q6L8G8 165 aa2.48□□□□□ -2.01
SNX20-203ENST00000423026 LCE3DQ9BYE3 92 aa2.47□□□□□ -2.01
SNX20-203ENST00000423026 PRM1P04553 51 aa2.46□□□□□ -2.02
SNX20-203ENST00000423026 MT3P25713 68 aa2.46□□□□□ -2.02
SNX20-203ENST00000423026 LCE3EQ5T5B0 92 aa2.46□□□□□ -2.02
SNX20-203ENST00000423026 KRTAP6-2Q3LI66 62 aa2.45□□□□□ -2.02
SNX20-203ENST00000423026 KRTAP20-2Q3LI61 65 aa2.35□□□□□ -2.03
SNX20-203ENST00000423026 KRTAP5-2Q701N4 177 aa2.29□□□□□ -2.04
SNX20-203ENST00000423026 MUC5BQ9HC84 5762 aaPredicted RBP2.27□□□□□ -2.05
SNX20-203ENST00000423026 OBSCNQ5VST9 7968 aa2.26□□□□□ -2.05
SNX20-203ENST00000423026 AHNAKQ09666 5890 aaKnown RBP2.25□□□□□ -2.05
SNX20-203ENST00000423026 LCE1EQ5T753 118 aa2.17□□□□□ -2.06
SNX20-203ENST00000423026 LCE1FQ5T754 118 aa2.17□□□□□ -2.06
SNX20-203ENST00000423026 MUC5ACP98088 5654 aa2.17□□□□□ -2.06
SNX20-203ENST00000423026 KRTAP4-4Q9BYR3 166 aa2.15□□□□□ -2.07
SNX20-203ENST00000423026 KRTAP5-8O75690 187 aa2.12□□□□□ -2.07
SNX20-203ENST00000423026 KRTAP5-1Q6L8H4 278 aa2.1□□□□□ -2.07
SNX20-203ENST00000423026 LCE1BQ5T7P3 118 aa1.99□□□□□ -2.09
SNX20-203ENST00000423026 KRTAP5-11Q6L8G4 156 aa1.96□□□□□ -2.1
SNX20-203ENST00000423026 LCE1CQ5T751 118 aa1.95□□□□□ -2.1
SNX20-203ENST00000423026 KRTAP21-2Q3LI59 83 aa1.74□□□□□ -2.13
SNX20-203ENST00000423026 KRTAP21-1Q3LI58 79 aa1.61□□□□□ -2.15
SNX20-203ENST00000423026 PHGR1C9JFL3 82 aa1.49□□□□□ -2.17
SNX20-203ENST00000423026 MUC19Q7Z5P9 8384 aa1.47□□□□□ -2.17
SNX20-203ENST00000423026 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 47.3 ms