RNA–Protein interactions for RNA: ENST00000422395.1

CCR9-204, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 1,331 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-204ENST00000422395 PRO2289Q9P1D8 64 aa3.14□□□□□ -1.91
CCR9-204ENST00000422395 INE1O15225 51 aa3.13□□□□□ -1.91
CCR9-204ENST00000422395 KRTAP10-12P60413 245 aa3.13□□□□□ -1.91
CCR9-204ENST00000422395 CRCT1Q9UGL9 99 aa3.13□□□□□ -1.91
CCR9-204ENST00000422395 FLGP20930 4061 aaPredicted RBP3.1□□□□□ -1.91
CCR9-204ENST00000422395 MT1HP80294 61 aa3.08□□□□□ -1.92
CCR9-204ENST00000422395 KRTAP19-2Q3LHN2 52 aa3.07□□□□□ -1.92
CCR9-204ENST00000422395 LCE1FQ5T754 118 aa3.07□□□□□ -1.92
CCR9-204ENST00000422395 M0R2T5 61 aa3.05□□□□□ -1.92
CCR9-204ENST00000422395 KRTAP4-3Q9BYR4 195 aa3.03□□□□□ -1.92
CCR9-204ENST00000422395 USH2AO75445 5202 aa2.99□□□□□ -1.93
CCR9-204ENST00000422395 SSPOA2VEC9 5147 aa2.98□□□□□ -1.93
CCR9-204ENST00000422395 SYNE2Q8WXH0 6885 aaKnown RBP2.93□□□□□ -1.94
CCR9-204ENST00000422395 MACF1Q9UPN3 7388 aaKnown RBP2.92□□□□□ -1.94
CCR9-204ENST00000422395 FCGBPQ9Y6R7 5405 aaPredicted RBP2.92□□□□□ -1.94
CCR9-204ENST00000422395 LCE3CQ5T5A8 94 aa2.91□□□□□ -1.94
CCR9-204ENST00000422395 LCE3AQ5TA76 89 aa2.86□□□□□ -1.95
CCR9-204ENST00000422395 SPRR2GQ9BYE4 73 aa2.85□□□□□ -1.95
CCR9-204ENST00000422395 MT2AP02795 61 aa2.84□□□□□ -1.96
CCR9-204ENST00000422395 KRTAP8-1Q8IUC2 63 aa2.84□□□□□ -1.96
CCR9-204ENST00000422395 MT1FP04733 61 aa2.82□□□□□ -1.96
CCR9-204ENST00000422395 KRTAP10-10P60014 251 aa2.82□□□□□ -1.96
CCR9-204ENST00000422395 KRTAP5-2Q701N4 177 aa2.82□□□□□ -1.96
CCR9-204ENST00000422395 NEBP20929 6669 aa2.76□□□□□ -1.97
CCR9-204ENST00000422395 KRTAP19-6Q3LI70 58 aa2.73□□□□□ -1.97
CCR9-204ENST00000422395 KRTAP12-3P60328 96 aa2.72□□□□□ -1.97
CCR9-204ENST00000422395 MUC12Q9UKN1 5478 aa2.69□□□□□ -1.98
CCR9-204ENST00000422395 KRTAP19-8Q3LI54 63 aa2.68□□□□□ -1.98
CCR9-204ENST00000422395 KRTAP6-3Q3LI67 103 aa2.68□□□□□ -1.98
CCR9-204ENST00000422395 LCE3EQ5T5B0 92 aa2.64□□□□□ -1.99
CCR9-204ENST00000422395 MDN1Q9NU22 5596 aa2.62□□□□□ -1.99
CCR9-204ENST00000422395 KMT2DO14686 5537 aa2.58□□□□□ -2
CCR9-204ENST00000422395 MT1XP80297 61 aa2.58□□□□□ -2
CCR9-204ENST00000422395 MT1BP07438 61 aa2.55□□□□□ -2
CCR9-204ENST00000422395 KRTAP20-1Q3LI63 56 aa2.55□□□□□ -2
CCR9-204ENST00000422395 KRTAP2-3P0C7H8 128 aa2.52□□□□□ -2.01
CCR9-204ENST00000422395 KRTAP2-4Q9BYR9 128 aa2.52□□□□□ -2.01
CCR9-204ENST00000422395 KRTAP2-1Q9BYU5 128 aa2.52□□□□□ -2.01
CCR9-204ENST00000422395 KRTAP5-5Q701N2 237 aaPredicted RBP2.51□□□□□ -2.01
CCR9-204ENST00000422395 LCE1CQ5T751 118 aa2.48□□□□□ -2.01
CCR9-204ENST00000422395 LCE1BQ5T7P3 118 aa2.48□□□□□ -2.01
CCR9-204ENST00000422395 KRTAP19-5Q3LI72 72 aa2.45□□□□□ -2.02
CCR9-204ENST00000422395 SPRR2FQ96RM1 72 aa2.43□□□□□ -2.02
CCR9-204ENST00000422395 SPRR2EP22531 72 aa2.42□□□□□ -2.02
CCR9-204ENST00000422395 SPRR2BP35325 72 aa2.42□□□□□ -2.02
CCR9-204ENST00000422395 SPRR2AP35326 72 aa2.42□□□□□ -2.02
CCR9-204ENST00000422395 KRTAP5-8O75690 187 aa2.41□□□□□ -2.02
CCR9-204ENST00000422395 GPR98Q8WXG9 6306 aa2.35□□□□□ -2.03
CCR9-204ENST00000422395 SPRR2DP22532 72 aa2.34□□□□□ -2.04
CCR9-204ENST00000422395 DSTQ03001 7570 aaKnown RBP2.31□□□□□ -2.04
CCR9-204ENST00000422395 MT1EP04732 61 aa2.3□□□□□ -2.04
CCR9-204ENST00000422395 KRTAP19-7Q3SYF9 63 aa2.28□□□□□ -2.04
CCR9-204ENST00000422395 MT1LQ93083 61 aa2.27□□□□□ -2.05
CCR9-204ENST00000422395 KRTAP12-4P60329 112 aa2.23□□□□□ -2.05
CCR9-204ENST00000422395 LCE3DQ9BYE3 92 aa2.2□□□□□ -2.06
CCR9-204ENST00000422395 MT1AP04731 61 aa2.17□□□□□ -2.06
CCR9-204ENST00000422395 HMCN1Q96RW7 5635 aa2.16□□□□□ -2.06
CCR9-204ENST00000422395 MT1GP13640 62 aa2.14□□□□□ -2.07
CCR9-204ENST00000422395 AHNAK2Q8IVF2 5795 aa2.13□□□□□ -2.07
CCR9-204ENST00000422395 KRTAP19-3Q7Z4W3 81 aa2.12□□□□□ -2.07
CCR9-204ENST00000422395 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
CCR9-204ENST00000422395 MT1MQ8N339 61 aa2.08□□□□□ -2.08
CCR9-204ENST00000422395 MT4P47944 62 aa2.06□□□□□ -2.08
CCR9-204ENST00000422395 KRTAP5-10Q6L8G5 202 aa1.99□□□□□ -2.09
CCR9-204ENST00000422395 PRM1P04553 51 aa1.98□□□□□ -2.09
CCR9-204ENST00000422395 KRTAP5-7Q6L8G8 165 aa1.97□□□□□ -2.09
CCR9-204ENST00000422395 KRTAP20-2Q3LI61 65 aa1.89□□□□□ -2.11
CCR9-204ENST00000422395 SYNE1Q8NF91 8797 aaKnown RBP1.88□□□□□ -2.11
CCR9-204ENST00000422395 KRTAP6-1Q3LI64 71 aa1.88□□□□□ -2.11
CCR9-204ENST00000422395 KRTAP6-2Q3LI66 62 aa1.85□□□□□ -2.11
CCR9-204ENST00000422395 AHNAKQ09666 5890 aaKnown RBP1.84□□□□□ -2.12
CCR9-204ENST00000422395 MUC5ACP98088 5654 aa1.78□□□□□ -2.12
CCR9-204ENST00000422395 MUC5BQ9HC84 5762 aaPredicted RBP1.77□□□□□ -2.13
CCR9-204ENST00000422395 KRTAP21-2Q3LI59 83 aa1.76□□□□□ -2.13
CCR9-204ENST00000422395 KRTAP21-1Q3LI58 79 aa1.34□□□□□ -2.2
CCR9-204ENST00000422395 PHGR1C9JFL3 82 aa1.17□□□□□ -2.22
CCR9-204ENST00000422395 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 100.4 ms