RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 KRTAP4-3Q9BYR4 195 aa3.99□□□□□ -1.77
SQSTM1-203ENST00000422245 AHNAK2Q8IVF2 5795 aa3.97□□□□□ -1.77
SQSTM1-203ENST00000422245 PRR15LQ9BU68 103 aa3.96□□□□□ -1.78
SQSTM1-203ENST00000422245 ANAPC13Q9BS18 74 aa3.94□□□□□ -1.78
SQSTM1-203ENST00000422245 H3BS24 57 aa3.93□□□□□ -1.78
SQSTM1-203ENST00000422245 KRTAP12-3P60328 96 aa3.91□□□□□ -1.78
SQSTM1-203ENST00000422245 KRTAP4-6Q9BYQ5 205 aa3.91□□□□□ -1.78
SQSTM1-203ENST00000422245 ATP5EP56381 51 aaPredicted RBP3.9□□□□□ -1.79
SQSTM1-203ENST00000422245 KRTAP5-10Q6L8G5 202 aa3.9□□□□□ -1.79
SQSTM1-203ENST00000422245 LINC01558Q9Y6Z2 57 aa3.87□□□□□ -1.79
SQSTM1-203ENST00000422245 KRTAP4-7Q9BYR0 210 aa3.86□□□□□ -1.79
SQSTM1-203ENST00000422245 CCDC179H3BU77 68 aa3.84□□□□□ -1.79
SQSTM1-203ENST00000422245 UQCR11O14957 56 aa3.81□□□□□ -1.8
SQSTM1-203ENST00000422245 KRTAP5-5Q701N2 237 aaPredicted RBP3.79□□□□□ -1.8
SQSTM1-203ENST00000422245 KRTAP25-1Q3LHN0 102 aa3.78□□□□□ -1.8
SQSTM1-203ENST00000422245 KRTAP20-2Q3LI61 65 aa3.78□□□□□ -1.8
SQSTM1-203ENST00000422245 KRTAP5-7Q6L8G8 165 aa3.78□□□□□ -1.8
SQSTM1-203ENST00000422245 KRTAP5-3Q6L8H2 238 aa3.78□□□□□ -1.8
SQSTM1-203ENST00000422245 SPRR5A0A1B0GTR4 108 aa3.77□□□□□ -1.81
SQSTM1-203ENST00000422245 KRTAP12-4P60329 112 aa3.74□□□□□ -1.81
SQSTM1-203ENST00000422245 TMEM258P61165 79 aa3.73□□□□□ -1.81
SQSTM1-203ENST00000422245 KRTAP19-4Q3LI73 84 aa3.72□□□□□ -1.81
SQSTM1-203ENST00000422245 MIR22HGQ0VDD5 57 aa3.7□□□□□ -1.82
SQSTM1-203ENST00000422245 K7ERS5 55 aa3.69□□□□□ -1.82
SQSTM1-203ENST00000422245 SYNE1Q8NF91 8797 aaKnown RBP3.67□□□□□ -1.82
SQSTM1-203ENST00000422245 LOC100996750A0A140TA64 210 aa3.66□□□□□ -1.82
SQSTM1-203ENST00000422245 KRTAP23-1A1A580 65 aa3.62□□□□□ -1.83
SQSTM1-203ENST00000422245 KRTAP15-1Q3LI76 137 aa3.6□□□□□ -1.83
SQSTM1-203ENST00000422245 LCE3CQ5T5A8 94 aa3.57□□□□□ -1.84
SQSTM1-203ENST00000422245 V9GYY9 64 aa3.57□□□□□ -1.84
SQSTM1-203ENST00000422245 PSPHP1O15172 72 aa3.54□□□□□ -1.84
SQSTM1-203ENST00000422245 MT1AP04731 61 aa3.5□□□□□ -1.85
SQSTM1-203ENST00000422245 Q1T7F1 81 aa3.5□□□□□ -1.85
SQSTM1-203ENST00000422245 KRTAP5-2Q701N4 177 aa3.49□□□□□ -1.85
SQSTM1-203ENST00000422245 KRTAP4-11Q9BYQ6 195 aa3.48□□□□□ -1.85
SQSTM1-203ENST00000422245 KRTAP6-1Q3LI64 71 aa3.47□□□□□ -1.85
SQSTM1-203ENST00000422245 CDC42SE1Q9NRR8 79 aa3.47□□□□□ -1.85
SQSTM1-203ENST00000422245 A6NED7 52 aa3.44□□□□□ -1.86
SQSTM1-203ENST00000422245 RPS28P62857 69 aaKnown RBP3.4□□□□□ -1.87
SQSTM1-203ENST00000422245 ROMO1P60602 79 aa3.39□□□□□ -1.87
SQSTM1-203ENST00000422245 KRTAP9-4Q9BYQ2 154 aa3.38□□□□□ -1.87
SQSTM1-203ENST00000422245 KRTAP5-8O75690 187 aa3.37□□□□□ -1.87
SQSTM1-203ENST00000422245 KRTAP9-6A8MVA2 160 aa3.36□□□□□ -1.87
SQSTM1-203ENST00000422245 OBSCNQ5VST9 7968 aa3.34□□□□□ -1.87
SQSTM1-203ENST00000422245 KRTAP6-2Q3LI66 62 aa3.34□□□□□ -1.87
SQSTM1-203ENST00000422245 PCP4P48539 62 aa3.33□□□□□ -1.88
SQSTM1-203ENST00000422245 AHNAKQ09666 5890 aaKnown RBP3.33□□□□□ -1.88
SQSTM1-203ENST00000422245 MUC5BQ9HC84 5762 aaPredicted RBP3.32□□□□□ -1.88
SQSTM1-203ENST00000422245 MUC5ACP98088 5654 aa3.31□□□□□ -1.88
SQSTM1-203ENST00000422245 A0A0A0MQY5 61 aa3.23□□□□□ -1.89
SQSTM1-203ENST00000422245 KRTAP9-9Q9BYP9 154 aa3.23□□□□□ -1.89
SQSTM1-203ENST00000422245 MT3P25713 68 aa3.21□□□□□ -1.9
SQSTM1-203ENST00000422245 KRTAP5-1Q6L8H4 278 aa3.14□□□□□ -1.91
SQSTM1-203ENST00000422245 LCE1EQ5T753 118 aa2.99□□□□□ -1.93
SQSTM1-203ENST00000422245 KRTAP4-2Q9BYR5 136 aa2.82□□□□□ -1.96
SQSTM1-203ENST00000422245 LCE1BQ5T7P3 118 aa2.8□□□□□ -1.96
SQSTM1-203ENST00000422245 KRTAP4-12Q9BQ66 201 aa2.8□□□□□ -1.96
SQSTM1-203ENST00000422245 BRK1Q8WUW1 75 aa2.77□□□□□ -1.97
SQSTM1-203ENST00000422245 LCE1CQ5T751 118 aa2.76□□□□□ -1.97
SQSTM1-203ENST00000422245 PRAC1Q96KF2 57 aa2.66□□□□□ -1.98
SQSTM1-203ENST00000422245 PMAIP1Q13794 54 aa2.59□□□□□ -1.99
SQSTM1-203ENST00000422245 LCE3DQ9BYE3 92 aa2.55□□□□□ -2
SQSTM1-203ENST00000422245 KRTAP5-11Q6L8G4 156 aa2.53□□□□□ -2
SQSTM1-203ENST00000422245 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.51□□□□□ -2.01
SQSTM1-203ENST00000422245 LCE1FQ5T754 118 aa2.49□□□□□ -2.01
SQSTM1-203ENST00000422245 LCE3EQ5T5B0 92 aa2.38□□□□□ -2.03
SQSTM1-203ENST00000422245 NDUFAF8A1L188 74 aa2.34□□□□□ -2.03
SQSTM1-203ENST00000422245 KRTAP21-2Q3LI59 83 aa2.29□□□□□ -2.04
SQSTM1-203ENST00000422245 PHGR1C9JFL3 82 aa2.28□□□□□ -2.04
SQSTM1-203ENST00000422245 PRO0628Q9UI54 55 aa2.26□□□□□ -2.05
SQSTM1-203ENST00000422245 LUZP6Q538Z0 58 aa2.21□□□□□ -2.06
SQSTM1-203ENST00000422245 KTN1-AS1Q86SY8 53 aa2.21□□□□□ -2.06
SQSTM1-203ENST00000422245 KRTAP4-4Q9BYR3 166 aa2.09□□□□□ -2.07
SQSTM1-203ENST00000422245 MUC19Q7Z5P9 8384 aa2.07□□□□□ -2.08
SQSTM1-203ENST00000422245 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
SQSTM1-203ENST00000422245 PRM1P04553 51 aa1.71□□□□□ -2.14
SQSTM1-203ENST00000422245 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
SQSTM1-203ENST00000422245 INE1O15225 51 aa1.23□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 12.5 ms