RNA–Protein interactions for RNA: ENST00000422121.2

NF1-203, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-203ENST00000422121 KRTAP2-4Q9BYR9 128 aa3.81□□□□□ -1.8
NF1-203ENST00000422121 CAMK2N1Q7Z7J9 78 aa3.8□□□□□ -1.8
NF1-203ENST00000422121 A0A1B0GU69 56 aa3.76□□□□□ -1.81
NF1-203ENST00000422121 A8MU10 97 aa3.76□□□□□ -1.81
NF1-203ENST00000422121 KRTAP19-7Q3SYF9 63 aa3.76□□□□□ -1.81
NF1-203ENST00000422121 SPINT4Q6UDR6 99 aa3.76□□□□□ -1.81
NF1-203ENST00000422121 SPRR2DP22532 72 aa3.74□□□□□ -1.81
NF1-203ENST00000422121 ATP5EP56381 51 aaPredicted RBP3.71□□□□□ -1.82
NF1-203ENST00000422121 KRTAP5-1Q6L8H4 278 aa3.71□□□□□ -1.82
NF1-203ENST00000422121 DSTQ03001 7570 aaKnown RBP3.71□□□□□ -1.82
NF1-203ENST00000422121 MT1EP04732 61 aa3.7□□□□□ -1.82
NF1-203ENST00000422121 KRTAP2-1Q9BYU5 128 aa3.7□□□□□ -1.82
NF1-203ENST00000422121 SMIM26A0A096LP01 95 aa3.69□□□□□ -1.82
NF1-203ENST00000422121 LINC01558Q9Y6Z2 57 aa3.69□□□□□ -1.82
NF1-203ENST00000422121 TMEM258P61165 79 aa3.66□□□□□ -1.82
NF1-203ENST00000422121 C10orf95Q9H7T3 257 aa3.66□□□□□ -1.82
NF1-203ENST00000422121 LCE3CQ5T5A8 94 aa3.65□□□□□ -1.83
NF1-203ENST00000422121 KRTAP19-5Q3LI72 72 aa3.64□□□□□ -1.83
NF1-203ENST00000422121 KRTAP19-3Q7Z4W3 81 aa3.62□□□□□ -1.83
NF1-203ENST00000422121 PRR15LQ9BU68 103 aa3.61□□□□□ -1.83
NF1-203ENST00000422121 LCE3AQ5TA76 89 aa3.58□□□□□ -1.84
NF1-203ENST00000422121 KRTAP4-4Q9BYR3 166 aa3.58□□□□□ -1.84
NF1-203ENST00000422121 KRTAP5-4Q6L8H1 288 aa3.55□□□□□ -1.84
NF1-203ENST00000422121 UQCR11O14957 56 aa3.54□□□□□ -1.84
NF1-203ENST00000422121 TNP1P09430 55 aa3.54□□□□□ -1.84
NF1-203ENST00000422121 MT1GP13640 62 aa3.54□□□□□ -1.84
NF1-203ENST00000422121 MT1LQ93083 61 aa3.53□□□□□ -1.84
NF1-203ENST00000422121 KRTAP9-6A8MVA2 160 aa3.51□□□□□ -1.85
NF1-203ENST00000422121 MT1MQ8N339 61 aa3.5□□□□□ -1.85
NF1-203ENST00000422121 MIR22HGQ0VDD5 57 aa3.48□□□□□ -1.85
NF1-203ENST00000422121 Q1T7F1 81 aa3.48□□□□□ -1.85
NF1-203ENST00000422121 PSPHP1O15172 72 aa3.47□□□□□ -1.85
NF1-203ENST00000422121 KRTAP4-3Q9BYR4 195 aa3.47□□□□□ -1.85
NF1-203ENST00000422121 PP632Q6XCG6 107 aa3.44□□□□□ -1.86
NF1-203ENST00000422121 KRTAP12-3P60328 96 aa3.42□□□□□ -1.86
NF1-203ENST00000422121 V9GYY9 64 aa3.42□□□□□ -1.86
NF1-203ENST00000422121 GPR98Q8WXG9 6306 aa3.41□□□□□ -1.86
NF1-203ENST00000422121 HMCN1Q96RW7 5635 aa3.4□□□□□ -1.87
NF1-203ENST00000422121 KRTAP25-1Q3LHN0 102 aa3.37□□□□□ -1.87
NF1-203ENST00000422121 RPS28P62857 69 aaKnown RBP3.34□□□□□ -1.87
NF1-203ENST00000422121 LCE3EQ5T5B0 92 aa3.34□□□□□ -1.87
NF1-203ENST00000422121 A6NED7 52 aa3.31□□□□□ -1.88
NF1-203ENST00000422121 K7ERS5 55 aa3.31□□□□□ -1.88
NF1-203ENST00000422121 MT4P47944 62 aa3.29□□□□□ -1.88
NF1-203ENST00000422121 AHNAK2Q8IVF2 5795 aa3.26□□□□□ -1.89
NF1-203ENST00000422121 OBSCNQ5VST9 7968 aa3.25□□□□□ -1.89
NF1-203ENST00000422121 KRTAP5-5Q701N2 237 aaPredicted RBP3.24□□□□□ -1.89
NF1-203ENST00000422121 SYNE1Q8NF91 8797 aaKnown RBP3.24□□□□□ -1.89
NF1-203ENST00000422121 ROMO1P60602 79 aa3.19□□□□□ -1.9
NF1-203ENST00000422121 CDC42SE1Q9NRR8 79 aa3.19□□□□□ -1.9
NF1-203ENST00000422121 KRTAP20-2Q3LI61 65 aa3.12□□□□□ -1.91
NF1-203ENST00000422121 SPRR5A0A1B0GTR4 108 aa3.09□□□□□ -1.91
NF1-203ENST00000422121 KRTAP5-10Q6L8G5 202 aa3.09□□□□□ -1.91
NF1-203ENST00000422121 KRTAP12-4P60329 112 aa3.05□□□□□ -1.92
NF1-203ENST00000422121 KRTAP6-1Q3LI64 71 aa3□□□□□ -1.93
NF1-203ENST00000422121 MT1AP04731 61 aa2.99□□□□□ -1.93
NF1-203ENST00000422121 KRTAP5-2Q701N4 177 aa2.98□□□□□ -1.93
NF1-203ENST00000422121 KRTAP5-7Q6L8G8 165 aa2.94□□□□□ -1.94
NF1-203ENST00000422121 BRK1Q8WUW1 75 aa2.88□□□□□ -1.95
NF1-203ENST00000422121 KRTAP6-2Q3LI66 62 aa2.85□□□□□ -1.95
NF1-203ENST00000422121 LCE3DQ9BYE3 92 aa2.81□□□□□ -1.96
NF1-203ENST00000422121 KRTAP5-8O75690 187 aa2.76□□□□□ -1.97
NF1-203ENST00000422121 LUZP6Q538Z0 58 aa2.73□□□□□ -1.97
NF1-203ENST00000422121 PMAIP1Q13794 54 aa2.71□□□□□ -1.98
NF1-203ENST00000422121 MUC5BQ9HC84 5762 aaPredicted RBP2.7□□□□□ -1.98
NF1-203ENST00000422121 AHNAKQ09666 5890 aaKnown RBP2.68□□□□□ -1.98
NF1-203ENST00000422121 MUC5ACP98088 5654 aa2.67□□□□□ -1.98
NF1-203ENST00000422121 PRO0628Q9UI54 55 aa2.63□□□□□ -1.99
NF1-203ENST00000422121 LCE1CQ5T751 118 aa2.57□□□□□ -2
NF1-203ENST00000422121 LCE1BQ5T7P3 118 aa2.57□□□□□ -2
NF1-203ENST00000422121 KTN1-AS1Q86SY8 53 aa2.41□□□□□ -2.02
NF1-203ENST00000422121 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
NF1-203ENST00000422121 KRTAP21-2Q3LI59 83 aa2.01□□□□□ -2.09
NF1-203ENST00000422121 PHGR1C9JFL3 82 aa1.82□□□□□ -2.12
NF1-203ENST00000422121 PRM1P04553 51 aa1.65□□□□□ -2.15
NF1-203ENST00000422121 INE1O15225 51 aa1.51□□□□□ -2.17
NF1-203ENST00000422121 KRTAP21-1Q3LI58 79 aa1.32□□□□□ -2.2
NF1-203ENST00000422121 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 70.6 ms