RNA–Protein interactions for RNA: ENST00000421862.1

AC004540.1-203, humanhuman

TSL 5 BASIC

Gene AC004540.1, Length 907 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-203ENST00000421862 CCDC179H3BU77 68 aa6.4□□□□□ -1.38
AC004540.1-203ENST00000421862 SMIM26A0A096LP01 95 aa6.38□□□□□ -1.39
AC004540.1-203ENST00000421862 KRTAP5-7Q6L8G8 165 aa6.33□□□□□ -1.4
AC004540.1-203ENST00000421862 PCP4P48539 62 aa6.32□□□□□ -1.4
AC004540.1-203ENST00000421862 ATP5EP56381 51 aaPredicted RBP6.32□□□□□ -1.4
AC004540.1-203ENST00000421862 TNP1P09430 55 aa6.3□□□□□ -1.4
AC004540.1-203ENST00000421862 TMEM258P61165 79 aa6.29□□□□□ -1.4
AC004540.1-203ENST00000421862 KRTAP5-3Q6L8H2 238 aa6.29□□□□□ -1.4
AC004540.1-203ENST00000421862 A8MU10 97 aa6.26□□□□□ -1.41
AC004540.1-203ENST00000421862 KRTAP4-7Q9BYR0 210 aa6.24□□□□□ -1.41
AC004540.1-203ENST00000421862 KRTAP20-2Q3LI61 65 aa6.22□□□□□ -1.41
AC004540.1-203ENST00000421862 PRR15LQ9BU68 103 aa6.21□□□□□ -1.42
AC004540.1-203ENST00000421862 KRTAP5-5Q701N2 237 aaPredicted RBP6.2□□□□□ -1.42
AC004540.1-203ENST00000421862 SPRR5A0A1B0GTR4 108 aa6.16□□□□□ -1.42
AC004540.1-203ENST00000421862 KRTAP12-3P60328 96 aa6.16□□□□□ -1.42
AC004540.1-203ENST00000421862 LINC01558Q9Y6Z2 57 aa6.08□□□□□ -1.44
AC004540.1-203ENST00000421862 KRTAP12-4P60329 112 aa6.02□□□□□ -1.45
AC004540.1-203ENST00000421862 RPS28P62857 69 aaKnown RBP5.99□□□□□ -1.45
AC004540.1-203ENST00000421862 SYNE1Q8NF91 8797 aaKnown RBP5.98□□□□□ -1.45
AC004540.1-203ENST00000421862 UQCR11O14957 56 aa5.98□□□□□ -1.45
AC004540.1-203ENST00000421862 LOC100996750A0A140TA64 210 aa5.92□□□□□ -1.46
AC004540.1-203ENST00000421862 V9GYY9 64 aa5.9□□□□□ -1.46
AC004540.1-203ENST00000421862 Q1T7F1 81 aa5.83□□□□□ -1.48
AC004540.1-203ENST00000421862 MIR22HGQ0VDD5 57 aa5.82□□□□□ -1.48
AC004540.1-203ENST00000421862 KRTAP19-4Q3LI73 84 aa5.82□□□□□ -1.48
AC004540.1-203ENST00000421862 KRTAP25-1Q3LHN0 102 aa5.81□□□□□ -1.48
AC004540.1-203ENST00000421862 K7ERS5 55 aa5.78□□□□□ -1.48
AC004540.1-203ENST00000421862 KRTAP4-11Q9BYQ6 195 aa5.74□□□□□ -1.49
AC004540.1-203ENST00000421862 KRTAP5-2Q701N4 177 aa5.73□□□□□ -1.49
AC004540.1-203ENST00000421862 PSPHP1O15172 72 aa5.64□□□□□ -1.51
AC004540.1-203ENST00000421862 KRTAP15-1Q3LI76 137 aa5.64□□□□□ -1.51
AC004540.1-203ENST00000421862 LCE3CQ5T5A8 94 aa5.64□□□□□ -1.51
AC004540.1-203ENST00000421862 MT1AP04731 61 aa5.63□□□□□ -1.51
AC004540.1-203ENST00000421862 KRTAP23-1A1A580 65 aa5.6□□□□□ -1.51
AC004540.1-203ENST00000421862 KRTAP6-1Q3LI64 71 aa5.6□□□□□ -1.51
AC004540.1-203ENST00000421862 KRTAP5-8O75690 187 aa5.58□□□□□ -1.52
AC004540.1-203ENST00000421862 MUC5ACP98088 5654 aa5.54□□□□□ -1.52
AC004540.1-203ENST00000421862 AHNAKQ09666 5890 aaKnown RBP5.53□□□□□ -1.52
AC004540.1-203ENST00000421862 A6NED7 52 aa5.52□□□□□ -1.53
AC004540.1-203ENST00000421862 MUC5BQ9HC84 5762 aaPredicted RBP5.52□□□□□ -1.53
AC004540.1-203ENST00000421862 KRTAP9-4Q9BYQ2 154 aa5.44□□□□□ -1.54
AC004540.1-203ENST00000421862 CDC42SE1Q9NRR8 79 aa5.44□□□□□ -1.54
AC004540.1-203ENST00000421862 OBSCNQ5VST9 7968 aa5.41□□□□□ -1.54
AC004540.1-203ENST00000421862 KRTAP6-2Q3LI66 62 aa5.4□□□□□ -1.54
AC004540.1-203ENST00000421862 KRTAP9-6A8MVA2 160 aa5.37□□□□□ -1.55
AC004540.1-203ENST00000421862 ROMO1P60602 79 aa5.32□□□□□ -1.56
AC004540.1-203ENST00000421862 KRTAP9-9Q9BYP9 154 aa5.29□□□□□ -1.56
AC004540.1-203ENST00000421862 BRK1Q8WUW1 75 aa5.26□□□□□ -1.57
AC004540.1-203ENST00000421862 KRTAP5-1Q6L8H4 278 aa5.19□□□□□ -1.58
AC004540.1-203ENST00000421862 MT3P25713 68 aa5.13□□□□□ -1.59
AC004540.1-203ENST00000421862 PRO0628Q9UI54 55 aa5.09□□□□□ -1.59
AC004540.1-203ENST00000421862 SVIPQ8NHG7 77 aa5.08□□□□□ -1.6
AC004540.1-203ENST00000421862 PMAIP1Q13794 54 aa4.99□□□□□ -1.61
AC004540.1-203ENST00000421862 LCE1EQ5T753 118 aa4.83□□□□□ -1.64
AC004540.1-203ENST00000421862 KTN1-AS1Q86SY8 53 aa4.75□□□□□ -1.65
AC004540.1-203ENST00000421862 H3BS24 57 aa4.7□□□□□ -1.66
AC004540.1-203ENST00000421862 KRTAP4-2Q9BYR5 136 aa4.62□□□□□ -1.67
AC004540.1-203ENST00000421862 PRAC1Q96KF2 57 aa4.61□□□□□ -1.67
AC004540.1-203ENST00000421862 LCE1CQ5T751 118 aa4.49□□□□□ -1.69
AC004540.1-203ENST00000421862 LCE1BQ5T7P3 118 aa4.49□□□□□ -1.69
AC004540.1-203ENST00000421862 KRTAP4-12Q9BQ66 201 aa4.21□□□□□ -1.74
AC004540.1-203ENST00000421862 KRTAP5-11Q6L8G4 156 aa4.12□□□□□ -1.75
AC004540.1-203ENST00000421862 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.08□□□□□ -1.76
AC004540.1-203ENST00000421862 LCE1FQ5T754 118 aa4.06□□□□□ -1.76
AC004540.1-203ENST00000421862 LCE3DQ9BYE3 92 aa3.97□□□□□ -1.77
AC004540.1-203ENST00000421862 LUZP6Q538Z0 58 aa3.93□□□□□ -1.78
AC004540.1-203ENST00000421862 PHGR1C9JFL3 82 aa3.78□□□□□ -1.8
AC004540.1-203ENST00000421862 KRTAP21-2Q3LI59 83 aa3.72□□□□□ -1.81
AC004540.1-203ENST00000421862 LCE3EQ5T5B0 92 aa3.68□□□□□ -1.82
AC004540.1-203ENST00000421862 NDUFAF8A1L188 74 aa3.56□□□□□ -1.84
AC004540.1-203ENST00000421862 A0A0A0MQY5 61 aa3.4□□□□□ -1.87
AC004540.1-203ENST00000421862 KRTAP4-4Q9BYR3 166 aa3.38□□□□□ -1.87
AC004540.1-203ENST00000421862 MUC19Q7Z5P9 8384 aa3.35□□□□□ -1.87
AC004540.1-203ENST00000421862 INE1O15225 51 aa3.06□□□□□ -1.92
AC004540.1-203ENST00000421862 KRTAP21-1Q3LI58 79 aa2.89□□□□□ -1.95
AC004540.1-203ENST00000421862 PRM1P04553 51 aa2.7□□□□□ -1.98
AC004540.1-203ENST00000421862 MUC16Q8WXI7 14507 aa2.37□□□□□ -2.03
Retrieved 77 of 20,778 RNA–protein pairs in 80.7 ms