RNA–Protein interactions for RNA: ENST00000421368.2

MSL3-208, Transcript of MSL complex subunit 3, humanhuman

TSL 5

Gene MSL3, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-208ENST00000421368 LCE3AQ5TA76 89 aa6.54□□□□□ -1.36
MSL3-208ENST00000421368 KRTAP19-3Q7Z4W3 81 aa6.52□□□□□ -1.37
MSL3-208ENST00000421368 LCE5AQ5TCM9 118 aa6.51□□□□□ -1.37
MSL3-208ENST00000421368 KRTAP2-2Q9BYT5 123 aa6.51□□□□□ -1.37
MSL3-208ENST00000421368 KRTAP2-1Q9BYU5 128 aa6.51□□□□□ -1.37
MSL3-208ENST00000421368 LCE3BQ5TA77 95 aa6.49□□□□□ -1.37
MSL3-208ENST00000421368 K7ERS5 55 aa6.45□□□□□ -1.38
MSL3-208ENST00000421368 A6NED7 52 aa6.43□□□□□ -1.38
MSL3-208ENST00000421368 MT1GP13640 62 aa6.38□□□□□ -1.39
MSL3-208ENST00000421368 MT1LQ93083 61 aa6.37□□□□□ -1.39
MSL3-208ENST00000421368 DSTQ03001 7570 aaKnown RBP6.35□□□□□ -1.39
MSL3-208ENST00000421368 KRTAP25-1Q3LHN0 102 aa6.35□□□□□ -1.39
MSL3-208ENST00000421368 PP632Q6XCG6 107 aa6.3□□□□□ -1.4
MSL3-208ENST00000421368 MT1MQ8N339 61 aa6.29□□□□□ -1.4
MSL3-208ENST00000421368 KRTAP12-3P60328 96 aa6.28□□□□□ -1.4
MSL3-208ENST00000421368 CDC42SE1Q9NRR8 79 aa6.18□□□□□ -1.42
MSL3-208ENST00000421368 KRTAP19-4Q3LI73 84 aa6.17□□□□□ -1.42
MSL3-208ENST00000421368 KRTAP4-3Q9BYR4 195 aa6.16□□□□□ -1.42
MSL3-208ENST00000421368 ROMO1P60602 79 aa6.09□□□□□ -1.43
MSL3-208ENST00000421368 KRTAP4-7Q9BYR0 210 aa6.08□□□□□ -1.44
MSL3-208ENST00000421368 BRK1Q8WUW1 75 aa6.01□□□□□ -1.45
MSL3-208ENST00000421368 KRTAP4-9Q9BYQ8 210 aa5.99□□□□□ -1.45
MSL3-208ENST00000421368 KRTAP15-1Q3LI76 137 aa5.94□□□□□ -1.46
MSL3-208ENST00000421368 LCE4AQ5TA78 99 aa5.92□□□□□ -1.46
MSL3-208ENST00000421368 LCE1DQ5T752 114 aa5.88□□□□□ -1.47
MSL3-208ENST00000421368 KRTAP5-4Q6L8H1 288 aa5.88□□□□□ -1.47
MSL3-208ENST00000421368 KRTAP4-12Q9BQ66 201 aa5.88□□□□□ -1.47
MSL3-208ENST00000421368 MT4P47944 62 aa5.83□□□□□ -1.48
MSL3-208ENST00000421368 HMCN1Q96RW7 5635 aa5.82□□□□□ -1.48
MSL3-208ENST00000421368 PRO0628Q9UI54 55 aa5.81□□□□□ -1.48
MSL3-208ENST00000421368 LCE3CQ5T5A8 94 aa5.8□□□□□ -1.48
MSL3-208ENST00000421368 KRTAP9-9Q9BYP9 154 aa5.79□□□□□ -1.48
MSL3-208ENST00000421368 KRTAP9-4Q9BYQ2 154 aa5.79□□□□□ -1.48
MSL3-208ENST00000421368 KRTAP5-5Q701N2 237 aaPredicted RBP5.76□□□□□ -1.49
MSL3-208ENST00000421368 GPR98Q8WXG9 6306 aa5.72□□□□□ -1.49
MSL3-208ENST00000421368 PMAIP1Q13794 54 aa5.65□□□□□ -1.5
MSL3-208ENST00000421368 PRAC1Q96KF2 57 aa5.6□□□□□ -1.51
MSL3-208ENST00000421368 AHNAK2Q8IVF2 5795 aa5.56□□□□□ -1.52
MSL3-208ENST00000421368 SYNE1Q8NF91 8797 aaKnown RBP5.55□□□□□ -1.52
MSL3-208ENST00000421368 KRTAP20-2Q3LI61 65 aa5.53□□□□□ -1.52
MSL3-208ENST00000421368 KRTAP12-4P60329 112 aa5.52□□□□□ -1.53
MSL3-208ENST00000421368 SPRR5A0A1B0GTR4 108 aa5.51□□□□□ -1.53
MSL3-208ENST00000421368 KRTAP9-6A8MVA2 160 aa5.51□□□□□ -1.53
MSL3-208ENST00000421368 KTN1-AS1Q86SY8 53 aa5.42□□□□□ -1.54
MSL3-208ENST00000421368 MT1AP04731 61 aa5.41□□□□□ -1.54
MSL3-208ENST00000421368 KRTAP6-1Q3LI64 71 aa5.39□□□□□ -1.55
MSL3-208ENST00000421368 KRTAP5-3Q6L8H2 238 aa5.37□□□□□ -1.55
MSL3-208ENST00000421368 KRTAP5-10Q6L8G5 202 aa5.36□□□□□ -1.55
MSL3-208ENST00000421368 KRTAP4-2Q9BYR5 136 aa5.29□□□□□ -1.56
MSL3-208ENST00000421368 KRTAP5-2Q701N4 177 aa5.19□□□□□ -1.58
MSL3-208ENST00000421368 KRTAP4-11Q9BYQ6 195 aa5.17□□□□□ -1.58
MSL3-208ENST00000421368 KRTAP5-7Q6L8G8 165 aa5.11□□□□□ -1.59
MSL3-208ENST00000421368 KRTAP6-2Q3LI66 62 aa5.09□□□□□ -1.59
MSL3-208ENST00000421368 NDUFAF8A1L188 74 aa5.03□□□□□ -1.6
MSL3-208ENST00000421368 MT3P25713 68 aa4.93□□□□□ -1.62
MSL3-208ENST00000421368 OBSCNQ5VST9 7968 aa4.85□□□□□ -1.63
MSL3-208ENST00000421368 KRTAP5-8O75690 187 aa4.82□□□□□ -1.64
MSL3-208ENST00000421368 KRTAP5-1Q6L8H4 278 aa4.61□□□□□ -1.67
MSL3-208ENST00000421368 MUC5ACP98088 5654 aa4.6□□□□□ -1.67
MSL3-208ENST00000421368 MUC5BQ9HC84 5762 aaPredicted RBP4.54□□□□□ -1.68
MSL3-208ENST00000421368 AHNAKQ09666 5890 aaKnown RBP4.51□□□□□ -1.69
MSL3-208ENST00000421368 LCE1EQ5T753 118 aa4.47□□□□□ -1.69
MSL3-208ENST00000421368 LUZP6Q538Z0 58 aa4.38□□□□□ -1.71
MSL3-208ENST00000421368 LCE1FQ5T754 118 aa4.22□□□□□ -1.73
MSL3-208ENST00000421368 LCE3DQ9BYE3 92 aa4.22□□□□□ -1.73
MSL3-208ENST00000421368 LCE1BQ5T7P3 118 aa4.2□□□□□ -1.74
MSL3-208ENST00000421368 LCE1CQ5T751 118 aa4.16□□□□□ -1.74
MSL3-208ENST00000421368 LCE3EQ5T5B0 92 aa4□□□□□ -1.77
MSL3-208ENST00000421368 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.82□□□□□ -1.8
MSL3-208ENST00000421368 KRTAP5-11Q6L8G4 156 aa3.75□□□□□ -1.81
MSL3-208ENST00000421368 KRTAP21-2Q3LI59 83 aa3.55□□□□□ -1.84
MSL3-208ENST00000421368 INE1O15225 51 aa3.4□□□□□ -1.87
MSL3-208ENST00000421368 PHGR1C9JFL3 82 aa3.23□□□□□ -1.89
MSL3-208ENST00000421368 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
MSL3-208ENST00000421368 PRM1P04553 51 aa3.13□□□□□ -1.91
MSL3-208ENST00000421368 MUC19Q7Z5P9 8384 aa2.99□□□□□ -1.93
MSL3-208ENST00000421368 KRTAP21-1Q3LI58 79 aa2.33□□□□□ -2.04
MSL3-208ENST00000421368 MUC16Q8WXI7 14507 aa2.11□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 72.9 ms