RNA–Protein interactions for RNA: ENST00000420163.1

SEC22C-206, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-206ENST00000420163 RPS28P62857 69 aaKnown RBP6.07□□□□□ -1.44
SEC22C-206ENST00000420163 LCE5AQ5TCM9 118 aa6.04□□□□□ -1.44
SEC22C-206ENST00000420163 KRTAP19-3Q7Z4W3 81 aa6.04□□□□□ -1.44
SEC22C-206ENST00000420163 KRTAP9-9Q9BYP9 154 aa6.03□□□□□ -1.44
SEC22C-206ENST00000420163 KRTAP9-4Q9BYQ2 154 aa6.03□□□□□ -1.44
SEC22C-206ENST00000420163 LCE4AQ5TA78 99 aa6.01□□□□□ -1.45
SEC22C-206ENST00000420163 A6NED7 52 aa6□□□□□ -1.45
SEC22C-206ENST00000420163 KRTAP2-2Q9BYT5 123 aa6□□□□□ -1.45
SEC22C-206ENST00000420163 KRTAP2-1Q9BYU5 128 aa6□□□□□ -1.45
SEC22C-206ENST00000420163 K7ERS5 55 aa5.98□□□□□ -1.45
SEC22C-206ENST00000420163 DSTQ03001 7570 aaKnown RBP5.96□□□□□ -1.46
SEC22C-206ENST00000420163 MT1LQ93083 61 aa5.92□□□□□ -1.46
SEC22C-206ENST00000420163 MT1GP13640 62 aa5.9□□□□□ -1.46
SEC22C-206ENST00000420163 KRTAP25-1Q3LHN0 102 aa5.89□□□□□ -1.47
SEC22C-206ENST00000420163 MT1MQ8N339 61 aa5.85□□□□□ -1.47
SEC22C-206ENST00000420163 KRTAP12-3P60328 96 aa5.84□□□□□ -1.47
SEC22C-206ENST00000420163 PP632Q6XCG6 107 aa5.82□□□□□ -1.48
SEC22C-206ENST00000420163 CDC42SE1Q9NRR8 79 aa5.77□□□□□ -1.49
SEC22C-206ENST00000420163 LCE1DQ5T752 114 aa5.76□□□□□ -1.49
SEC22C-206ENST00000420163 KRTAP4-3Q9BYR4 195 aa5.75□□□□□ -1.49
SEC22C-206ENST00000420163 KRTAP23-1A1A580 65 aa5.71□□□□□ -1.5
SEC22C-206ENST00000420163 KRTAP4-7Q9BYR0 210 aa5.69□□□□□ -1.5
SEC22C-206ENST00000420163 ROMO1P60602 79 aa5.68□□□□□ -1.5
SEC22C-206ENST00000420163 KRTAP4-9Q9BYQ8 210 aa5.58□□□□□ -1.52
SEC22C-206ENST00000420163 KRTAP15-1Q3LI76 137 aa5.51□□□□□ -1.53
SEC22C-206ENST00000420163 KRTAP5-4Q6L8H1 288 aa5.44□□□□□ -1.54
SEC22C-206ENST00000420163 HMCN1Q96RW7 5635 aa5.44□□□□□ -1.54
SEC22C-206ENST00000420163 KRTAP4-11Q9BYQ6 195 aa5.43□□□□□ -1.54
SEC22C-206ENST00000420163 MT4P47944 62 aa5.41□□□□□ -1.54
SEC22C-206ENST00000420163 LCE3CQ5T5A8 94 aa5.4□□□□□ -1.54
SEC22C-206ENST00000420163 BRK1Q8WUW1 75 aa5.38□□□□□ -1.55
SEC22C-206ENST00000420163 KRTAP4-2Q9BYR5 136 aa5.38□□□□□ -1.55
SEC22C-206ENST00000420163 KRTAP5-5Q701N2 237 aaPredicted RBP5.35□□□□□ -1.55
SEC22C-206ENST00000420163 GPR98Q8WXG9 6306 aa5.35□□□□□ -1.55
SEC22C-206ENST00000420163 AHNAK2Q8IVF2 5795 aa5.22□□□□□ -1.57
SEC22C-206ENST00000420163 SVIPQ8NHG7 77 aa5.22□□□□□ -1.57
SEC22C-206ENST00000420163 SYNE1Q8NF91 8797 aaKnown RBP5.16□□□□□ -1.58
SEC22C-206ENST00000420163 KRTAP9-6A8MVA2 160 aa5.15□□□□□ -1.59
SEC22C-206ENST00000420163 KRTAP20-2Q3LI61 65 aa5.12□□□□□ -1.59
SEC22C-206ENST00000420163 SPRR5A0A1B0GTR4 108 aa5.09□□□□□ -1.59
SEC22C-206ENST00000420163 KRTAP12-4P60329 112 aa5.09□□□□□ -1.59
SEC22C-206ENST00000420163 PMAIP1Q13794 54 aa5.04□□□□□ -1.6
SEC22C-206ENST00000420163 MT1AP04731 61 aa5.03□□□□□ -1.6
SEC22C-206ENST00000420163 KRTAP6-1Q3LI64 71 aa5.01□□□□□ -1.61
SEC22C-206ENST00000420163 KRTAP5-3Q6L8H2 238 aa4.98□□□□□ -1.61
SEC22C-206ENST00000420163 KRTAP5-10Q6L8G5 202 aa4.94□□□□□ -1.62
SEC22C-206ENST00000420163 PRAC1Q96KF2 57 aa4.89□□□□□ -1.63
SEC22C-206ENST00000420163 PRO0628Q9UI54 55 aa4.84□□□□□ -1.63
SEC22C-206ENST00000420163 KRTAP5-2Q701N4 177 aa4.82□□□□□ -1.64
SEC22C-206ENST00000420163 KRTAP6-2Q3LI66 62 aa4.74□□□□□ -1.65
SEC22C-206ENST00000420163 KRTAP5-7Q6L8G8 165 aa4.71□□□□□ -1.66
SEC22C-206ENST00000420163 A0A0A0MQY5 61 aa4.68□□□□□ -1.66
SEC22C-206ENST00000420163 KTN1-AS1Q86SY8 53 aa4.59□□□□□ -1.67
SEC22C-206ENST00000420163 MT3P25713 68 aa4.56□□□□□ -1.68
SEC22C-206ENST00000420163 OBSCNQ5VST9 7968 aa4.56□□□□□ -1.68
SEC22C-206ENST00000420163 KRTAP5-8O75690 187 aa4.47□□□□□ -1.69
SEC22C-206ENST00000420163 MUC5ACP98088 5654 aa4.29□□□□□ -1.72
SEC22C-206ENST00000420163 KRTAP5-1Q6L8H4 278 aa4.28□□□□□ -1.72
SEC22C-206ENST00000420163 AHNAKQ09666 5890 aaKnown RBP4.25□□□□□ -1.73
SEC22C-206ENST00000420163 MUC5BQ9HC84 5762 aaPredicted RBP4.24□□□□□ -1.73
SEC22C-206ENST00000420163 LCE1EQ5T753 118 aa4.14□□□□□ -1.75
SEC22C-206ENST00000420163 LUZP6Q538Z0 58 aa3.99□□□□□ -1.77
SEC22C-206ENST00000420163 LCE1BQ5T7P3 118 aa3.91□□□□□ -1.78
SEC22C-206ENST00000420163 LCE3DQ9BYE3 92 aa3.91□□□□□ -1.78
SEC22C-206ENST00000420163 LCE1CQ5T751 118 aa3.84□□□□□ -1.79
SEC22C-206ENST00000420163 LCE1FQ5T754 118 aa3.81□□□□□ -1.8
SEC22C-206ENST00000420163 LCE3EQ5T5B0 92 aa3.71□□□□□ -1.82
SEC22C-206ENST00000420163 KRTAP5-11Q6L8G4 156 aa3.69□□□□□ -1.82
SEC22C-206ENST00000420163 NDUFAF8A1L188 74 aa3.62□□□□□ -1.83
SEC22C-206ENST00000420163 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.54□□□□□ -1.84
SEC22C-206ENST00000420163 KRTAP21-2Q3LI59 83 aa3.3□□□□□ -1.88
SEC22C-206ENST00000420163 KRTAP4-4Q9BYR3 166 aa3.01□□□□□ -1.93
SEC22C-206ENST00000420163 PHGR1C9JFL3 82 aa2.99□□□□□ -1.93
SEC22C-206ENST00000420163 PRM1P04553 51 aa2.93□□□□□ -1.94
SEC22C-206ENST00000420163 MUC19Q7Z5P9 8384 aa2.81□□□□□ -1.96
SEC22C-206ENST00000420163 INE1O15225 51 aa2.73□□□□□ -1.97
SEC22C-206ENST00000420163 KRTAP21-1Q3LI58 79 aa2.14□□□□□ -2.07
SEC22C-206ENST00000420163 MUC16Q8WXI7 14507 aa1.96□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 48 ms