RNA–Protein interactions for RNA: ENST00000419867.6

SWI5-204, Transcript of SWI5 homologous recombination repair protein, humanhuman

TSL 1 (best) BASIC

Gene SWI5, Length 1,048 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWI5-204ENST00000419867 KRTAP19-3Q7Z4W3 81 aa4.27□□□□□ -1.73
SWI5-204ENST00000419867 V9GYY9 64 aa4.25□□□□□ -1.73
SWI5-204ENST00000419867 RPS28P62857 69 aaKnown RBP4.23□□□□□ -1.73
SWI5-204ENST00000419867 LCE3AQ5TA76 89 aa4.22□□□□□ -1.73
SWI5-204ENST00000419867 KRTAP5-3Q6L8H2 238 aa4.19□□□□□ -1.74
SWI5-204ENST00000419867 UQCR11O14957 56 aa4.18□□□□□ -1.74
SWI5-204ENST00000419867 Q1T7F1 81 aa4.17□□□□□ -1.74
SWI5-204ENST00000419867 SPRR5A0A1B0GTR4 108 aa4.16□□□□□ -1.74
SWI5-204ENST00000419867 PSPHP1O15172 72 aa4.16□□□□□ -1.74
SWI5-204ENST00000419867 KRTAP4-6Q9BYQ5 205 aa4.16□□□□□ -1.74
SWI5-204ENST00000419867 TNP1P09430 55 aa4.15□□□□□ -1.75
SWI5-204ENST00000419867 KRTAP5-4Q6L8H1 288 aa4.15□□□□□ -1.75
SWI5-204ENST00000419867 MIR22HGQ0VDD5 57 aa4.14□□□□□ -1.75
SWI5-204ENST00000419867 MT1LQ93083 61 aa4.13□□□□□ -1.75
SWI5-204ENST00000419867 MT1MQ8N339 61 aa4.1□□□□□ -1.75
SWI5-204ENST00000419867 MT1GP13640 62 aa4.09□□□□□ -1.75
SWI5-204ENST00000419867 KRTAP4-3Q9BYR4 195 aa4.08□□□□□ -1.76
SWI5-204ENST00000419867 PP632Q6XCG6 107 aa4.05□□□□□ -1.76
SWI5-204ENST00000419867 KRTAP4-7Q9BYR0 210 aa4.01□□□□□ -1.77
SWI5-204ENST00000419867 A6NED7 52 aa4□□□□□ -1.77
SWI5-204ENST00000419867 KRTAP12-3P60328 96 aa4□□□□□ -1.77
SWI5-204ENST00000419867 K7ERS5 55 aa3.98□□□□□ -1.77
SWI5-204ENST00000419867 KRTAP25-1Q3LHN0 102 aa3.97□□□□□ -1.77
SWI5-204ENST00000419867 KRTAP20-2Q3LI61 65 aa3.96□□□□□ -1.78
SWI5-204ENST00000419867 CDC42SE1Q9NRR8 79 aa3.89□□□□□ -1.79
SWI5-204ENST00000419867 LOC100996750A0A140TA64 210 aa3.79□□□□□ -1.8
SWI5-204ENST00000419867 KRTAP23-1A1A580 65 aa3.79□□□□□ -1.8
SWI5-204ENST00000419867 ROMO1P60602 79 aa3.78□□□□□ -1.8
SWI5-204ENST00000419867 KRTAP15-1Q3LI76 137 aa3.76□□□□□ -1.81
SWI5-204ENST00000419867 KRTAP5-5Q701N2 237 aaPredicted RBP3.76□□□□□ -1.81
SWI5-204ENST00000419867 KRTAP12-4P60329 112 aa3.75□□□□□ -1.81
SWI5-204ENST00000419867 BRK1Q8WUW1 75 aa3.75□□□□□ -1.81
SWI5-204ENST00000419867 MUC5ACP98088 5654 aa3.73□□□□□ -1.81
SWI5-204ENST00000419867 KRTAP4-11Q9BYQ6 195 aa3.72□□□□□ -1.81
SWI5-204ENST00000419867 AHNAKQ09666 5890 aaKnown RBP3.71□□□□□ -1.82
SWI5-204ENST00000419867 LCE3CQ5T5A8 94 aa3.7□□□□□ -1.82
SWI5-204ENST00000419867 MUC5BQ9HC84 5762 aaPredicted RBP3.68□□□□□ -1.82
SWI5-204ENST00000419867 KRTAP5-8O75690 187 aa3.65□□□□□ -1.83
SWI5-204ENST00000419867 KRTAP19-4Q3LI73 84 aa3.62□□□□□ -1.83
SWI5-204ENST00000419867 SVIPQ8NHG7 77 aa3.62□□□□□ -1.83
SWI5-204ENST00000419867 KRTAP9-6A8MVA2 160 aa3.6□□□□□ -1.83
SWI5-204ENST00000419867 SYNE1Q8NF91 8797 aaKnown RBP3.57□□□□□ -1.84
SWI5-204ENST00000419867 PMAIP1Q13794 54 aa3.56□□□□□ -1.84
SWI5-204ENST00000419867 KRTAP5-2Q701N4 177 aa3.55□□□□□ -1.84
SWI5-204ENST00000419867 PRO0628Q9UI54 55 aa3.54□□□□□ -1.84
SWI5-204ENST00000419867 KRTAP6-1Q3LI64 71 aa3.52□□□□□ -1.85
SWI5-204ENST00000419867 KRTAP9-9Q9BYP9 154 aa3.51□□□□□ -1.85
SWI5-204ENST00000419867 MT1AP04731 61 aa3.5□□□□□ -1.85
SWI5-204ENST00000419867 KRTAP9-4Q9BYQ2 154 aa3.36□□□□□ -1.87
SWI5-204ENST00000419867 OBSCNQ5VST9 7968 aa3.36□□□□□ -1.87
SWI5-204ENST00000419867 KRTAP6-2Q3LI66 62 aa3.32□□□□□ -1.88
SWI5-204ENST00000419867 KTN1-AS1Q86SY8 53 aa3.32□□□□□ -1.88
SWI5-204ENST00000419867 KRTAP5-1Q6L8H4 278 aa3.28□□□□□ -1.88
SWI5-204ENST00000419867 PRAC1Q96KF2 57 aa3.28□□□□□ -1.88
SWI5-204ENST00000419867 MT3P25713 68 aa3.14□□□□□ -1.91
SWI5-204ENST00000419867 LCE1EQ5T753 118 aa2.93□□□□□ -1.94
SWI5-204ENST00000419867 LUZP6Q538Z0 58 aa2.85□□□□□ -1.95
SWI5-204ENST00000419867 KRTAP4-2Q9BYR5 136 aa2.84□□□□□ -1.95
SWI5-204ENST00000419867 LCE1BQ5T7P3 118 aa2.8□□□□□ -1.96
SWI5-204ENST00000419867 KRTAP4-12Q9BQ66 201 aa2.74□□□□□ -1.97
SWI5-204ENST00000419867 LCE1CQ5T751 118 aa2.72□□□□□ -1.97
SWI5-204ENST00000419867 LCE3DQ9BYE3 92 aa2.66□□□□□ -1.98
SWI5-204ENST00000419867 KRTAP5-11Q6L8G4 156 aa2.64□□□□□ -1.99
SWI5-204ENST00000419867 H3BS24 57 aa2.6□□□□□ -1.99
SWI5-204ENST00000419867 PHGR1C9JFL3 82 aa2.59□□□□□ -1.99
SWI5-204ENST00000419867 A0A0A0MQY5 61 aa2.58□□□□□ -2
SWI5-204ENST00000419867 LCE1FQ5T754 118 aa2.56□□□□□ -2
SWI5-204ENST00000419867 LCE3EQ5T5B0 92 aa2.51□□□□□ -2.01
SWI5-204ENST00000419867 NDUFAF8A1L188 74 aa2.5□□□□□ -2.01
SWI5-204ENST00000419867 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.45□□□□□ -2.02
SWI5-204ENST00000419867 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
SWI5-204ENST00000419867 KRTAP4-4Q9BYR3 166 aa2.14□□□□□ -2.07
SWI5-204ENST00000419867 INE1O15225 51 aa2.13□□□□□ -2.07
SWI5-204ENST00000419867 MUC19Q7Z5P9 8384 aa2.07□□□□□ -2.08
SWI5-204ENST00000419867 PRM1P04553 51 aa1.99□□□□□ -2.09
SWI5-204ENST00000419867 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
SWI5-204ENST00000419867 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 135.4 ms