RNA–Protein interactions for RNA: ENST00000419830.2

USP8-203, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 2,402 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-203ENST00000419830 KRTAP10-12P60413 245 aa3.58□□□□□ -1.84
USP8-203ENST00000419830 KRTAP12-3P60328 96 aa3.57□□□□□ -1.84
USP8-203ENST00000419830 PRO2289Q9P1D8 64 aa3.45□□□□□ -1.86
USP8-203ENST00000419830 USH2AO75445 5202 aa3.43□□□□□ -1.86
USP8-203ENST00000419830 KRTAP19-5Q3LI72 72 aa3.43□□□□□ -1.86
USP8-203ENST00000419830 KMT2DO14686 5537 aa3.38□□□□□ -1.87
USP8-203ENST00000419830 LCE3CQ5T5A8 94 aa3.38□□□□□ -1.87
USP8-203ENST00000419830 KRTAP5-3Q6L8H2 238 aa3.34□□□□□ -1.87
USP8-203ENST00000419830 INE1O15225 51 aa3.32□□□□□ -1.88
USP8-203ENST00000419830 KRTAP9-6A8MVA2 160 aa3.31□□□□□ -1.88
USP8-203ENST00000419830 KRTAP19-7Q3SYF9 63 aa3.29□□□□□ -1.88
USP8-203ENST00000419830 MT1LQ93083 61 aa3.18□□□□□ -1.9
USP8-203ENST00000419830 SSPOA2VEC9 5147 aa3.18□□□□□ -1.9
USP8-203ENST00000419830 MT1EP04732 61 aa3.18□□□□□ -1.9
USP8-203ENST00000419830 KRTAP2-3P0C7H8 128 aa3.18□□□□□ -1.9
USP8-203ENST00000419830 KRTAP2-4Q9BYR9 128 aa3.18□□□□□ -1.9
USP8-203ENST00000419830 KRTAP2-1Q9BYU5 128 aa3.18□□□□□ -1.9
USP8-203ENST00000419830 KRTAP19-6Q3LI70 58 aa3.09□□□□□ -1.92
USP8-203ENST00000419830 FSIP2Q5CZC0 6907 aa3.06□□□□□ -1.92
USP8-203ENST00000419830 KRTAP4-3Q9BYR4 195 aa3.03□□□□□ -1.92
USP8-203ENST00000419830 FCGBPQ9Y6R7 5405 aaPredicted RBP3.01□□□□□ -1.93
USP8-203ENST00000419830 MUC12Q9UKN1 5478 aa2.98□□□□□ -1.93
USP8-203ENST00000419830 MT1GP13640 62 aa2.97□□□□□ -1.93
USP8-203ENST00000419830 MT1MQ8N339 61 aa2.97□□□□□ -1.93
USP8-203ENST00000419830 KRTAP19-3Q7Z4W3 81 aa2.95□□□□□ -1.94
USP8-203ENST00000419830 CRCT1Q9UGL9 99 aa2.87□□□□□ -1.95
USP8-203ENST00000419830 HMCN1Q96RW7 5635 aa2.81□□□□□ -1.96
USP8-203ENST00000419830 SPRR2FQ96RM1 72 aa2.81□□□□□ -1.96
USP8-203ENST00000419830 DSTQ03001 7570 aaKnown RBP2.8□□□□□ -1.96
USP8-203ENST00000419830 KRTAP12-4P60329 112 aa2.79□□□□□ -1.96
USP8-203ENST00000419830 MACF1Q9UPN3 7388 aaKnown RBP2.72□□□□□ -1.97
USP8-203ENST00000419830 KRTAP6-1Q3LI64 71 aa2.71□□□□□ -1.98
USP8-203ENST00000419830 LCE1AQ5T7P2 110 aa2.7□□□□□ -1.98
USP8-203ENST00000419830 MT1AP04731 61 aa2.68□□□□□ -1.98
USP8-203ENST00000419830 MDN1Q9NU22 5596 aa2.68□□□□□ -1.98
USP8-203ENST00000419830 SYNE2Q8WXH0 6885 aaKnown RBP2.66□□□□□ -1.98
USP8-203ENST00000419830 KRTAP5-5Q701N2 237 aaPredicted RBP2.63□□□□□ -1.99
USP8-203ENST00000419830 KRTAP5-9P26371 169 aa2.61□□□□□ -1.99
USP8-203ENST00000419830 SYNE1Q8NF91 8797 aaKnown RBP2.6□□□□□ -1.99
USP8-203ENST00000419830 LCE3DQ9BYE3 92 aa2.59□□□□□ -1.99
USP8-203ENST00000419830 LCE3EQ5T5B0 92 aa2.56□□□□□ -2
USP8-203ENST00000419830 KRTAP2-2Q9BYT5 123 aa2.56□□□□□ -2
USP8-203ENST00000419830 SPRR2EP22531 72 aa2.53□□□□□ -2
USP8-203ENST00000419830 SPRR2BP35325 72 aa2.53□□□□□ -2
USP8-203ENST00000419830 SPRR2AP35326 72 aa2.53□□□□□ -2
USP8-203ENST00000419830 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.52□□□□□ -2.01
USP8-203ENST00000419830 KRTAP5-11Q6L8G4 156 aa2.49□□□□□ -2.01
USP8-203ENST00000419830 PRM1P04553 51 aa2.47□□□□□ -2.01
USP8-203ENST00000419830 KRTAP6-2Q3LI66 62 aa2.42□□□□□ -2.02
USP8-203ENST00000419830 SPRR2DP22532 72 aa2.41□□□□□ -2.02
USP8-203ENST00000419830 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
USP8-203ENST00000419830 MT3P25713 68 aa2.37□□□□□ -2.03
USP8-203ENST00000419830 LCE1EQ5T753 118 aa2.35□□□□□ -2.03
USP8-203ENST00000419830 KRTAP6-3Q3LI67 103 aa2.34□□□□□ -2.03
USP8-203ENST00000419830 OBSCNQ5VST9 7968 aa2.32□□□□□ -2.04
USP8-203ENST00000419830 KRTAP5-4Q6L8H1 288 aa2.29□□□□□ -2.04
USP8-203ENST00000419830 GPR98Q8WXG9 6306 aa2.28□□□□□ -2.04
USP8-203ENST00000419830 LCE1FQ5T754 118 aa2.26□□□□□ -2.05
USP8-203ENST00000419830 NEBP20929 6669 aa2.18□□□□□ -2.06
USP8-203ENST00000419830 KRTAP5-1Q6L8H4 278 aa2.17□□□□□ -2.06
USP8-203ENST00000419830 KRTAP5-2Q701N4 177 aa2.16□□□□□ -2.06
USP8-203ENST00000419830 MT4P47944 62 aa2.15□□□□□ -2.07
USP8-203ENST00000419830 KRTAP20-2Q3LI61 65 aa2.14□□□□□ -2.07
USP8-203ENST00000419830 KRTAP4-4Q9BYR3 166 aa2.09□□□□□ -2.08
USP8-203ENST00000419830 MUC5ACP98088 5654 aa2.03□□□□□ -2.08
USP8-203ENST00000419830 KRTAP20-1Q3LI63 56 aa1.99□□□□□ -2.09
USP8-203ENST00000419830 KRTAP5-10Q6L8G5 202 aa1.91□□□□□ -2.1
USP8-203ENST00000419830 LCE1BQ5T7P3 118 aa1.9□□□□□ -2.1
USP8-203ENST00000419830 AHNAKQ09666 5890 aaKnown RBP1.86□□□□□ -2.11
USP8-203ENST00000419830 LCE1CQ5T751 118 aa1.84□□□□□ -2.11
USP8-203ENST00000419830 AHNAK2Q8IVF2 5795 aa1.78□□□□□ -2.12
USP8-203ENST00000419830 KRTAP21-2Q3LI59 83 aa1.76□□□□□ -2.13
USP8-203ENST00000419830 KRTAP5-8O75690 187 aa1.72□□□□□ -2.13
USP8-203ENST00000419830 KRTAP5-7Q6L8G8 165 aa1.7□□□□□ -2.14
USP8-203ENST00000419830 KRTAP21-1Q3LI58 79 aa1.57□□□□□ -2.16
USP8-203ENST00000419830 MUC19Q7Z5P9 8384 aa1.47□□□□□ -2.17
USP8-203ENST00000419830 PHGR1C9JFL3 82 aa1.37□□□□□ -2.19
USP8-203ENST00000419830 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 113.4 ms