RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 CRCT1Q9UGL9 99 aa2.89□□□□□ -1.95
CPS1-202ENST00000417946 MT1XP80297 61 aa2.88□□□□□ -1.95
CPS1-202ENST00000417946 KRTAP5-4Q6L8H1 288 aa2.88□□□□□ -1.95
CPS1-202ENST00000417946 KRTAP9-6A8MVA2 160 aa2.87□□□□□ -1.95
CPS1-202ENST00000417946 KRTAP19-6Q3LI70 58 aa2.87□□□□□ -1.95
CPS1-202ENST00000417946 SPINT4Q6UDR6 99 aa2.86□□□□□ -1.95
CPS1-202ENST00000417946 PLAC4Q8WY50 150 aa2.84□□□□□ -1.95
CPS1-202ENST00000417946 FCGBPQ9Y6R7 5405 aaPredicted RBP2.83□□□□□ -1.96
CPS1-202ENST00000417946 KRTAP5-9P26371 169 aa2.83□□□□□ -1.96
CPS1-202ENST00000417946 KRTAP4-4Q9BYR3 166 aa2.82□□□□□ -1.96
CPS1-202ENST00000417946 C10orf95Q9H7T3 257 aa2.82□□□□□ -1.96
CPS1-202ENST00000417946 KRTAP10-12P60413 245 aa2.81□□□□□ -1.96
CPS1-202ENST00000417946 KRTAP25-1Q3LHN0 102 aa2.77□□□□□ -1.97
CPS1-202ENST00000417946 PRO2289Q9P1D8 64 aa2.77□□□□□ -1.97
CPS1-202ENST00000417946 ROMO1P60602 79 aa2.71□□□□□ -1.98
CPS1-202ENST00000417946 LCE1FQ5T754 118 aa2.7□□□□□ -1.98
CPS1-202ENST00000417946 MACF1Q9UPN3 7388 aaKnown RBP2.68□□□□□ -1.98
CPS1-202ENST00000417946 KMT2DO14686 5537 aa2.67□□□□□ -1.98
CPS1-202ENST00000417946 TNP1P09430 55 aa2.65□□□□□ -1.99
CPS1-202ENST00000417946 LCE3AQ5TA76 89 aa2.63□□□□□ -1.99
CPS1-202ENST00000417946 SYNE2Q8WXH0 6885 aaKnown RBP2.61□□□□□ -1.99
CPS1-202ENST00000417946 KRTAP6-3Q3LI67 103 aa2.59□□□□□ -1.99
CPS1-202ENST00000417946 LCE3CQ5T5A8 94 aa2.59□□□□□ -1.99
CPS1-202ENST00000417946 OBSCNQ5VST9 7968 aa2.59□□□□□ -2
CPS1-202ENST00000417946 KRTAP19-7Q3SYF9 63 aa2.58□□□□□ -2
CPS1-202ENST00000417946 KRTAP8-1Q8IUC2 63 aa2.58□□□□□ -2
CPS1-202ENST00000417946 KRTAP4-3Q9BYR4 195 aa2.56□□□□□ -2
CPS1-202ENST00000417946 KRTAP19-5Q3LI72 72 aa2.55□□□□□ -2
CPS1-202ENST00000417946 MUC12Q9UKN1 5478 aa2.54□□□□□ -2
CPS1-202ENST00000417946 MT1EP04732 61 aa2.52□□□□□ -2.01
CPS1-202ENST00000417946 PP632Q6XCG6 107 aa2.52□□□□□ -2.01
CPS1-202ENST00000417946 KRTAP12-3P60328 96 aa2.5□□□□□ -2.01
CPS1-202ENST00000417946 SPRR2FQ96RM1 72 aa2.5□□□□□ -2.01
CPS1-202ENST00000417946 NEBP20929 6669 aa2.48□□□□□ -2.01
CPS1-202ENST00000417946 MT1LQ93083 61 aa2.46□□□□□ -2.02
CPS1-202ENST00000417946 MDN1Q9NU22 5596 aa2.45□□□□□ -2.02
CPS1-202ENST00000417946 SPRR2EP22531 72 aa2.41□□□□□ -2.02
CPS1-202ENST00000417946 SPRR2BP35325 72 aa2.41□□□□□ -2.02
CPS1-202ENST00000417946 SPRR2AP35326 72 aa2.41□□□□□ -2.02
CPS1-202ENST00000417946 KRTAP19-3Q7Z4W3 81 aa2.41□□□□□ -2.02
CPS1-202ENST00000417946 MT1MQ8N339 61 aa2.38□□□□□ -2.03
CPS1-202ENST00000417946 MT1GP13640 62 aa2.36□□□□□ -2.03
CPS1-202ENST00000417946 LCE3EQ5T5B0 92 aa2.35□□□□□ -2.03
CPS1-202ENST00000417946 KRTAP5-2Q701N4 177 aa2.34□□□□□ -2.03
CPS1-202ENST00000417946 SPRR2DP22532 72 aa2.33□□□□□ -2.04
CPS1-202ENST00000417946 SPRR5A0A1B0GTR4 108 aa2.3□□□□□ -2.04
CPS1-202ENST00000417946 KRTAP2-3P0C7H8 128 aa2.29□□□□□ -2.04
CPS1-202ENST00000417946 KRTAP2-4Q9BYR9 128 aa2.29□□□□□ -2.04
CPS1-202ENST00000417946 KRTAP20-1Q3LI63 56 aa2.28□□□□□ -2.04
CPS1-202ENST00000417946 DSTQ03001 7570 aaKnown RBP2.25□□□□□ -2.05
CPS1-202ENST00000417946 KRTAP2-1Q9BYU5 128 aa2.23□□□□□ -2.05
CPS1-202ENST00000417946 KRTAP5-5Q701N2 237 aaPredicted RBP2.2□□□□□ -2.06
CPS1-202ENST00000417946 LCE1CQ5T751 118 aa2.19□□□□□ -2.06
CPS1-202ENST00000417946 LCE1BQ5T7P3 118 aa2.19□□□□□ -2.06
CPS1-202ENST00000417946 INE1O15225 51 aa2.14□□□□□ -2.07
CPS1-202ENST00000417946 MT1AP04731 61 aa2.09□□□□□ -2.07
CPS1-202ENST00000417946 KRTAP6-1Q3LI64 71 aa2.07□□□□□ -2.08
CPS1-202ENST00000417946 SYNE1Q8NF91 8797 aaKnown RBP2.04□□□□□ -2.08
CPS1-202ENST00000417946 HMCN1Q96RW7 5635 aa2.03□□□□□ -2.09
CPS1-202ENST00000417946 KRTAP5-8O75690 187 aa2.01□□□□□ -2.09
CPS1-202ENST00000417946 MT4P47944 62 aa2.01□□□□□ -2.09
CPS1-202ENST00000417946 KRTAP12-4P60329 112 aa1.99□□□□□ -2.09
CPS1-202ENST00000417946 LCE3DQ9BYE3 92 aa1.99□□□□□ -2.09
CPS1-202ENST00000417946 KRTAP20-2Q3LI61 65 aa1.96□□□□□ -2.1
CPS1-202ENST00000417946 KRTAP6-2Q3LI66 62 aa1.91□□□□□ -2.1
CPS1-202ENST00000417946 AHNAK2Q8IVF2 5795 aa1.88□□□□□ -2.11
CPS1-202ENST00000417946 GPR98Q8WXG9 6306 aa1.82□□□□□ -2.12
CPS1-202ENST00000417946 KRTAP5-10Q6L8G5 202 aa1.8□□□□□ -2.12
CPS1-202ENST00000417946 MUC19Q7Z5P9 8384 aa1.79□□□□□ -2.12
CPS1-202ENST00000417946 KRTAP5-7Q6L8G8 165 aa1.73□□□□□ -2.13
CPS1-202ENST00000417946 MUC5ACP98088 5654 aa1.65□□□□□ -2.15
CPS1-202ENST00000417946 KRTAP21-2Q3LI59 83 aa1.53□□□□□ -2.16
CPS1-202ENST00000417946 MUC5BQ9HC84 5762 aaPredicted RBP1.51□□□□□ -2.17
CPS1-202ENST00000417946 AHNAKQ09666 5890 aaKnown RBP1.5□□□□□ -2.17
CPS1-202ENST00000417946 PRM1P04553 51 aa1.42□□□□□ -2.18
CPS1-202ENST00000417946 PHGR1C9JFL3 82 aa1.18□□□□□ -2.22
CPS1-202ENST00000417946 KRTAP21-1Q3LI58 79 aa0.88□□□□□ -2.27
CPS1-202ENST00000417946 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 534.1 ms