RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 FSIP2Q5CZC0 6907 aa6.19□□□□□ -1.42
SSBP3-205ENST00000417664 KRTAP19-7Q3SYF9 63 aa6.16□□□□□ -1.42
SSBP3-205ENST00000417664 KMT2DO14686 5537 aa6.16□□□□□ -1.42
SSBP3-205ENST00000417664 LUZP6Q538Z0 58 aa6.12□□□□□ -1.43
SSBP3-205ENST00000417664 FCGBPQ9Y6R7 5405 aaPredicted RBP6.12□□□□□ -1.43
SSBP3-205ENST00000417664 KRTAP19-4Q3LI73 84 aa6.11□□□□□ -1.43
SSBP3-205ENST00000417664 CRCT1Q9UGL9 99 aa6.11□□□□□ -1.43
SSBP3-205ENST00000417664 MT1EP04732 61 aa6.04□□□□□ -1.44
SSBP3-205ENST00000417664 NDUFAF8A1L188 74 aa6.02□□□□□ -1.45
SSBP3-205ENST00000417664 LCE3CQ5T5A8 94 aa6□□□□□ -1.45
SSBP3-205ENST00000417664 MT1LQ93083 61 aa5.95□□□□□ -1.46
SSBP3-205ENST00000417664 KRTAP4-11Q9BYQ6 195 aa5.94□□□□□ -1.46
SSBP3-205ENST00000417664 KRTAP9-7A8MTY7 169 aa5.84□□□□□ -1.47
SSBP3-205ENST00000417664 KRTAP19-3Q7Z4W3 81 aa5.8□□□□□ -1.48
SSBP3-205ENST00000417664 SPRR2FQ96RM1 72 aa5.8□□□□□ -1.48
SSBP3-205ENST00000417664 MT1GP13640 62 aa5.79□□□□□ -1.48
SSBP3-205ENST00000417664 MACF1Q9UPN3 7388 aaKnown RBP5.72□□□□□ -1.49
SSBP3-205ENST00000417664 KRTAP5-9P26371 169 aa5.72□□□□□ -1.49
SSBP3-205ENST00000417664 MT1MQ8N339 61 aa5.68□□□□□ -1.5
SSBP3-205ENST00000417664 LCE5AQ5TCM9 118 aa5.67□□□□□ -1.5
SSBP3-205ENST00000417664 MUC12Q9UKN1 5478 aa5.65□□□□□ -1.51
SSBP3-205ENST00000417664 KRTAP9-6A8MVA2 160 aa5.63□□□□□ -1.51
SSBP3-205ENST00000417664 KRTAP6-3Q3LI67 103 aa5.53□□□□□ -1.52
SSBP3-205ENST00000417664 LCE1AQ5T7P2 110 aa5.53□□□□□ -1.52
SSBP3-205ENST00000417664 KRTAP4-3Q9BYR4 195 aa5.51□□□□□ -1.53
SSBP3-205ENST00000417664 SYNE2Q8WXH0 6885 aaKnown RBP5.49□□□□□ -1.53
SSBP3-205ENST00000417664 SPRR2EP22531 72 aa5.46□□□□□ -1.54
SSBP3-205ENST00000417664 SPRR2BP35325 72 aa5.46□□□□□ -1.54
SSBP3-205ENST00000417664 SPRR2AP35326 72 aa5.46□□□□□ -1.54
SSBP3-205ENST00000417664 MDN1Q9NU22 5596 aa5.38□□□□□ -1.55
SSBP3-205ENST00000417664 KRTAP2-3P0C7H8 128 aa5.33□□□□□ -1.56
SSBP3-205ENST00000417664 KRTAP2-4Q9BYR9 128 aa5.33□□□□□ -1.56
SSBP3-205ENST00000417664 KRTAP2-1Q9BYU5 128 aa5.33□□□□□ -1.56
SSBP3-205ENST00000417664 SPRR2DP22532 72 aa5.25□□□□□ -1.57
SSBP3-205ENST00000417664 LCE4AQ5TA78 99 aa5.25□□□□□ -1.57
SSBP3-205ENST00000417664 DSTQ03001 7570 aaKnown RBP5.17□□□□□ -1.58
SSBP3-205ENST00000417664 NEBP20929 6669 aa5.13□□□□□ -1.59
SSBP3-205ENST00000417664 KRTAP5-5Q701N2 237 aaPredicted RBP5.12□□□□□ -1.59
SSBP3-205ENST00000417664 MT1AP04731 61 aa5.08□□□□□ -1.6
SSBP3-205ENST00000417664 INE1O15225 51 aa5.05□□□□□ -1.6
SSBP3-205ENST00000417664 KRTAP20-1Q3LI63 56 aa5.05□□□□□ -1.6
SSBP3-205ENST00000417664 KRTAP6-1Q3LI64 71 aa4.99□□□□□ -1.61
SSBP3-205ENST00000417664 KRTAP5-4Q6L8H1 288 aa4.82□□□□□ -1.64
SSBP3-205ENST00000417664 KRTAP12-4P60329 112 aa4.74□□□□□ -1.65
SSBP3-205ENST00000417664 SYNE1Q8NF91 8797 aaKnown RBP4.72□□□□□ -1.65
SSBP3-205ENST00000417664 KRTAP2-2Q9BYT5 123 aa4.72□□□□□ -1.65
SSBP3-205ENST00000417664 GPR98Q8WXG9 6306 aa4.62□□□□□ -1.67
SSBP3-205ENST00000417664 MT3P25713 68 aa4.61□□□□□ -1.67
SSBP3-205ENST00000417664 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.59□□□□□ -1.67
SSBP3-205ENST00000417664 KRTAP6-2Q3LI66 62 aa4.57□□□□□ -1.68
SSBP3-205ENST00000417664 LCE3DQ9BYE3 92 aa4.54□□□□□ -1.68
SSBP3-205ENST00000417664 MT4P47944 62 aa4.52□□□□□ -1.69
SSBP3-205ENST00000417664 KRTAP20-2Q3LI61 65 aa4.48□□□□□ -1.69
SSBP3-205ENST00000417664 LCE3EQ5T5B0 92 aa4.44□□□□□ -1.7
SSBP3-205ENST00000417664 KRTAP5-2Q701N4 177 aa4.4□□□□□ -1.71
SSBP3-205ENST00000417664 HMCN1Q96RW7 5635 aa4.33□□□□□ -1.72
SSBP3-205ENST00000417664 OBSCNQ5VST9 7968 aa4.07□□□□□ -1.76
SSBP3-205ENST00000417664 LCE1FQ5T754 118 aa4.05□□□□□ -1.76
SSBP3-205ENST00000417664 KRTAP5-10Q6L8G5 202 aa4.01□□□□□ -1.77
SSBP3-205ENST00000417664 AHNAK2Q8IVF2 5795 aa4□□□□□ -1.77
SSBP3-205ENST00000417664 KRTAP5-11Q6L8G4 156 aa4□□□□□ -1.77
SSBP3-205ENST00000417664 LCE1EQ5T753 118 aa3.99□□□□□ -1.77
SSBP3-205ENST00000417664 KRTAP5-7Q6L8G8 165 aa3.94□□□□□ -1.78
SSBP3-205ENST00000417664 PRM1P04553 51 aa3.91□□□□□ -1.78
SSBP3-205ENST00000417664 KRTAP5-1Q6L8H4 278 aa3.84□□□□□ -1.79
SSBP3-205ENST00000417664 KRTAP4-4Q9BYR3 166 aa3.81□□□□□ -1.8
SSBP3-205ENST00000417664 LCE1CQ5T751 118 aa3.71□□□□□ -1.82
SSBP3-205ENST00000417664 LCE1BQ5T7P3 118 aa3.71□□□□□ -1.82
SSBP3-205ENST00000417664 KRTAP5-8O75690 187 aa3.68□□□□□ -1.82
SSBP3-205ENST00000417664 MUC5ACP98088 5654 aa3.63□□□□□ -1.83
SSBP3-205ENST00000417664 AHNAKQ09666 5890 aaKnown RBP3.5□□□□□ -1.85
SSBP3-205ENST00000417664 MUC5BQ9HC84 5762 aaPredicted RBP3.34□□□□□ -1.87
SSBP3-205ENST00000417664 KRTAP21-2Q3LI59 83 aa3.27□□□□□ -1.89
SSBP3-205ENST00000417664 PHGR1C9JFL3 82 aa2.78□□□□□ -1.96
SSBP3-205ENST00000417664 KRTAP21-1Q3LI58 79 aa2.44□□□□□ -2.02
SSBP3-205ENST00000417664 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
SSBP3-205ENST00000417664 MUC16Q8WXI7 14507 aa1.8□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 12.5 ms