RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 KRTAP4-2Q9BYR5 136 aa3.7□□□□□ -1.82
HDLBP-206ENST00000417540 AHNAK2Q8IVF2 5795 aa3.68□□□□□ -1.82
HDLBP-206ENST00000417540 HMCN1Q96RW7 5635 aa3.67□□□□□ -1.82
HDLBP-206ENST00000417540 MT1LQ93083 61 aa3.67□□□□□ -1.82
HDLBP-206ENST00000417540 MT1MQ8N339 61 aa3.65□□□□□ -1.83
HDLBP-206ENST00000417540 KRTAP4-12Q9BQ66 201 aa3.65□□□□□ -1.83
HDLBP-206ENST00000417540 PRR15LQ9BU68 103 aa3.65□□□□□ -1.83
HDLBP-206ENST00000417540 KRTAP4-3Q9BYR4 195 aa3.65□□□□□ -1.83
HDLBP-206ENST00000417540 LCE1DQ5T752 114 aa3.64□□□□□ -1.83
HDLBP-206ENST00000417540 TNP1P09430 55 aa3.6□□□□□ -1.83
HDLBP-206ENST00000417540 MT1GP13640 62 aa3.59□□□□□ -1.83
HDLBP-206ENST00000417540 UQCR11O14957 56 aa3.56□□□□□ -1.84
HDLBP-206ENST00000417540 MT4P47944 62 aa3.56□□□□□ -1.84
HDLBP-206ENST00000417540 KRTAP5-10Q6L8G5 202 aa3.56□□□□□ -1.84
HDLBP-206ENST00000417540 PSPHP1O15172 72 aa3.54□□□□□ -1.84
HDLBP-206ENST00000417540 PP632Q6XCG6 107 aa3.53□□□□□ -1.84
HDLBP-206ENST00000417540 MIR22HGQ0VDD5 57 aa3.52□□□□□ -1.85
HDLBP-206ENST00000417540 KRTAP12-3P60328 96 aa3.5□□□□□ -1.85
HDLBP-206ENST00000417540 LCE4AQ5TA78 99 aa3.46□□□□□ -1.86
HDLBP-206ENST00000417540 Q1T7F1 81 aa3.44□□□□□ -1.86
HDLBP-206ENST00000417540 KRTAP5-7Q6L8G8 165 aa3.44□□□□□ -1.86
HDLBP-206ENST00000417540 KRTAP5-4Q6L8H1 288 aa3.43□□□□□ -1.86
HDLBP-206ENST00000417540 KRTAP25-1Q3LHN0 102 aa3.4□□□□□ -1.87
HDLBP-206ENST00000417540 V9GYY9 64 aa3.38□□□□□ -1.87
HDLBP-206ENST00000417540 A6NED7 52 aa3.37□□□□□ -1.87
HDLBP-206ENST00000417540 KRTAP5-5Q701N2 237 aaPredicted RBP3.36□□□□□ -1.87
HDLBP-206ENST00000417540 KRTAP4-11Q9BYQ6 195 aa3.35□□□□□ -1.87
HDLBP-206ENST00000417540 SYNE1Q8NF91 8797 aaKnown RBP3.34□□□□□ -1.87
HDLBP-206ENST00000417540 SPRR5A0A1B0GTR4 108 aa3.34□□□□□ -1.87
HDLBP-206ENST00000417540 K7ERS5 55 aa3.33□□□□□ -1.88
HDLBP-206ENST00000417540 PCP4P48539 62 aa3.29□□□□□ -1.88
HDLBP-206ENST00000417540 KRTAP20-2Q3LI61 65 aa3.26□□□□□ -1.89
HDLBP-206ENST00000417540 KRTAP15-1Q3LI76 137 aa3.26□□□□□ -1.89
HDLBP-206ENST00000417540 CDC42SE1Q9NRR8 79 aa3.25□□□□□ -1.89
HDLBP-206ENST00000417540 ROMO1P60602 79 aa3.22□□□□□ -1.89
HDLBP-206ENST00000417540 KRTAP23-1A1A580 65 aa3.21□□□□□ -1.9
HDLBP-206ENST00000417540 LCE3CQ5T5A8 94 aa3.21□□□□□ -1.9
HDLBP-206ENST00000417540 RPS28P62857 69 aaKnown RBP3.19□□□□□ -1.9
HDLBP-206ENST00000417540 KRTAP9-6A8MVA2 160 aa3.17□□□□□ -1.9
HDLBP-206ENST00000417540 KRTAP6-1Q3LI64 71 aa3.14□□□□□ -1.91
HDLBP-206ENST00000417540 AHNAKQ09666 5890 aaKnown RBP3.11□□□□□ -1.91
HDLBP-206ENST00000417540 KRTAP12-4P60329 112 aa3.11□□□□□ -1.91
HDLBP-206ENST00000417540 MT1AP04731 61 aa3.1□□□□□ -1.91
HDLBP-206ENST00000417540 KRTAP19-4Q3LI73 84 aa3.06□□□□□ -1.92
HDLBP-206ENST00000417540 MUC5ACP98088 5654 aa3.06□□□□□ -1.92
HDLBP-206ENST00000417540 MUC5BQ9HC84 5762 aaPredicted RBP3.04□□□□□ -1.92
HDLBP-206ENST00000417540 KRTAP5-2Q701N4 177 aa3.04□□□□□ -1.92
HDLBP-206ENST00000417540 KRTAP5-8O75690 187 aa2.97□□□□□ -1.93
HDLBP-206ENST00000417540 KRTAP6-2Q3LI66 62 aa2.96□□□□□ -1.94
HDLBP-206ENST00000417540 BRK1Q8WUW1 75 aa2.93□□□□□ -1.94
HDLBP-206ENST00000417540 OBSCNQ5VST9 7968 aa2.88□□□□□ -1.95
HDLBP-206ENST00000417540 PRAC1Q96KF2 57 aa2.77□□□□□ -1.97
HDLBP-206ENST00000417540 MT3P25713 68 aa2.76□□□□□ -1.97
HDLBP-206ENST00000417540 KRTAP5-1Q6L8H4 278 aa2.72□□□□□ -1.97
HDLBP-206ENST00000417540 PMAIP1Q13794 54 aa2.66□□□□□ -1.98
HDLBP-206ENST00000417540 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.65□□□□□ -1.99
HDLBP-206ENST00000417540 LCE1EQ5T753 118 aa2.49□□□□□ -2.01
HDLBP-206ENST00000417540 PRO0628Q9UI54 55 aa2.47□□□□□ -2.01
HDLBP-206ENST00000417540 LCE1BQ5T7P3 118 aa2.45□□□□□ -2.02
HDLBP-206ENST00000417540 KTN1-AS1Q86SY8 53 aa2.43□□□□□ -2.02
HDLBP-206ENST00000417540 H3BS24 57 aa2.38□□□□□ -2.03
HDLBP-206ENST00000417540 SVIPQ8NHG7 77 aa2.36□□□□□ -2.03
HDLBP-206ENST00000417540 LCE1CQ5T751 118 aa2.34□□□□□ -2.03
HDLBP-206ENST00000417540 KRTAP5-11Q6L8G4 156 aa2.3□□□□□ -2.04
HDLBP-206ENST00000417540 LCE3DQ9BYE3 92 aa2.29□□□□□ -2.04
HDLBP-206ENST00000417540 KRTAP4-4Q9BYR3 166 aa2.28□□□□□ -2.04
HDLBP-206ENST00000417540 LCE3EQ5T5B0 92 aa2.15□□□□□ -2.07
HDLBP-206ENST00000417540 LUZP6Q538Z0 58 aa2.1□□□□□ -2.07
HDLBP-206ENST00000417540 PHGR1C9JFL3 82 aa2.08□□□□□ -2.08
HDLBP-206ENST00000417540 KRTAP21-2Q3LI59 83 aa2.04□□□□□ -2.08
HDLBP-206ENST00000417540 LCE1FQ5T754 118 aa2.02□□□□□ -2.09
HDLBP-206ENST00000417540 NDUFAF8A1L188 74 aa1.8□□□□□ -2.12
HDLBP-206ENST00000417540 MUC19Q7Z5P9 8384 aa1.78□□□□□ -2.12
HDLBP-206ENST00000417540 PRM1P04553 51 aa1.73□□□□□ -2.13
HDLBP-206ENST00000417540 A0A0A0MQY5 61 aa1.67□□□□□ -2.14
HDLBP-206ENST00000417540 KRTAP21-1Q3LI58 79 aa1.54□□□□□ -2.16
HDLBP-206ENST00000417540 INE1O15225 51 aa1.37□□□□□ -2.19
HDLBP-206ENST00000417540 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 66.4 ms