RNA–Protein interactions for RNA: ENST00000417352.5

COPS3-202, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-202ENST00000417352 SERP1Q9Y6X1 66 aa2.62□□□□□ -1.99
COPS3-202ENST00000417352 SPATA8Q6RVD6 105 aa2.59□□□□□ -1.99
COPS3-202ENST00000417352 KRTAP19-3Q7Z4W3 81 aa2.59□□□□□ -1.99
COPS3-202ENST00000417352 K7ERU9 68 aa2.58□□□□□ -2
COPS3-202ENST00000417352 MT1EP04732 61 aa2.58□□□□□ -2
COPS3-202ENST00000417352 KRTAP19-7Q3SYF9 63 aa2.58□□□□□ -2
COPS3-202ENST00000417352 CYSTM1Q9H1C7 97 aa2.58□□□□□ -2
COPS3-202ENST00000417352 SPANXA2-OT1Q8N9U9 137 aa2.57□□□□□ -2
COPS3-202ENST00000417352 COA5Q86WW8 74 aa2.56□□□□□ -2
COPS3-202ENST00000417352 A0A1B0GU33 70 aa2.55□□□□□ -2
COPS3-202ENST00000417352 KRTAP19-5Q3LI72 72 aa2.55□□□□□ -2
COPS3-202ENST00000417352 MT4P47944 62 aa2.54□□□□□ -2
COPS3-202ENST00000417352 PP632Q6XCG6 107 aa2.54□□□□□ -2
COPS3-202ENST00000417352 SERP2Q8N6R1 65 aa2.54□□□□□ -2
COPS3-202ENST00000417352 DSTQ03001 7570 aaKnown RBP2.54□□□□□ -2
COPS3-202ENST00000417352 SMIM26A0A096LP01 95 aa2.52□□□□□ -2.01
COPS3-202ENST00000417352 MT1GP13640 62 aa2.52□□□□□ -2.01
COPS3-202ENST00000417352 LCE3AQ5TA76 89 aa2.52□□□□□ -2.01
COPS3-202ENST00000417352 KRTAP5-2Q701N4 177 aa2.52□□□□□ -2.01
COPS3-202ENST00000417352 GPR98Q8WXG9 6306 aa2.49□□□□□ -2.01
COPS3-202ENST00000417352 PSPHP1O15172 72 aa2.49□□□□□ -2.01
COPS3-202ENST00000417352 KRTAP12-1P59990 96 aa2.49□□□□□ -2.01
COPS3-202ENST00000417352 A0A1B0GU69 56 aa2.48□□□□□ -2.01
COPS3-202ENST00000417352 MT1MQ8N339 61 aa2.47□□□□□ -2.01
COPS3-202ENST00000417352 PRO0628Q9UI54 55 aa2.47□□□□□ -2.01
COPS3-202ENST00000417352 A8MU10 97 aa2.46□□□□□ -2.02
COPS3-202ENST00000417352 C10orf95Q9H7T3 257 aa2.46□□□□□ -2.02
COPS3-202ENST00000417352 TNP1P09430 55 aa2.45□□□□□ -2.02
COPS3-202ENST00000417352 MT1LQ93083 61 aa2.45□□□□□ -2.02
COPS3-202ENST00000417352 LCE3EQ5T5B0 92 aa2.43□□□□□ -2.02
COPS3-202ENST00000417352 COX7CP15954 63 aa2.42□□□□□ -2.02
COPS3-202ENST00000417352 ANAPC13Q9BS18 74 aa2.4□□□□□ -2.03
COPS3-202ENST00000417352 H7BZZ5 65 aa2.39□□□□□ -2.03
COPS3-202ENST00000417352 HMCN1Q96RW7 5635 aa2.38□□□□□ -2.03
COPS3-202ENST00000417352 PRR15LQ9BU68 103 aa2.37□□□□□ -2.03
COPS3-202ENST00000417352 KRTAP12-3P60328 96 aa2.35□□□□□ -2.03
COPS3-202ENST00000417352 KRTAP5-10Q6L8G5 202 aa2.35□□□□□ -2.03
COPS3-202ENST00000417352 LUZP6Q538Z0 58 aa2.31□□□□□ -2.04
COPS3-202ENST00000417352 KRTAP5-5Q701N2 237 aaPredicted RBP2.31□□□□□ -2.04
COPS3-202ENST00000417352 SPRR5A0A1B0GTR4 108 aa2.3□□□□□ -2.04
COPS3-202ENST00000417352 KRTAP12-4P60329 112 aa2.29□□□□□ -2.04
COPS3-202ENST00000417352 AHNAK2Q8IVF2 5795 aa2.29□□□□□ -2.04
COPS3-202ENST00000417352 KRTAP20-2Q3LI61 65 aa2.28□□□□□ -2.04
COPS3-202ENST00000417352 UQCR11O14957 56 aa2.27□□□□□ -2.05
COPS3-202ENST00000417352 PMAIP1Q13794 54 aa2.27□□□□□ -2.05
COPS3-202ENST00000417352 CCDC179H3BU77 68 aa2.26□□□□□ -2.05
COPS3-202ENST00000417352 K7ERS5 55 aa2.26□□□□□ -2.05
COPS3-202ENST00000417352 KRTAP5-7Q6L8G8 165 aa2.26□□□□□ -2.05
COPS3-202ENST00000417352 LINC01558Q9Y6Z2 57 aa2.25□□□□□ -2.05
COPS3-202ENST00000417352 ATP5EP56381 51 aaPredicted RBP2.24□□□□□ -2.05
COPS3-202ENST00000417352 KRTAP25-1Q3LHN0 102 aa2.23□□□□□ -2.05
COPS3-202ENST00000417352 MIR22HGQ0VDD5 57 aa2.22□□□□□ -2.05
COPS3-202ENST00000417352 LCE1CQ5T751 118 aa2.21□□□□□ -2.06
COPS3-202ENST00000417352 LCE1BQ5T7P3 118 aa2.21□□□□□ -2.06
COPS3-202ENST00000417352 A6NED7 52 aa2.18□□□□□ -2.06
COPS3-202ENST00000417352 TMEM258P61165 79 aa2.15□□□□□ -2.07
COPS3-202ENST00000417352 KRTAP5-8O75690 187 aa2.1□□□□□ -2.07
COPS3-202ENST00000417352 RPS28P62857 69 aaKnown RBP2.09□□□□□ -2.07
COPS3-202ENST00000417352 KRTAP6-1Q3LI64 71 aa2.09□□□□□ -2.07
COPS3-202ENST00000417352 MT1AP04731 61 aa2.08□□□□□ -2.08
COPS3-202ENST00000417352 CDC42SE1Q9NRR8 79 aa2.08□□□□□ -2.08
COPS3-202ENST00000417352 Q1T7F1 81 aa2.05□□□□□ -2.08
COPS3-202ENST00000417352 KRTAP6-2Q3LI66 62 aa2.04□□□□□ -2.08
COPS3-202ENST00000417352 SYNE1Q8NF91 8797 aaKnown RBP2.03□□□□□ -2.08
COPS3-202ENST00000417352 KTN1-AS1Q86SY8 53 aa2.03□□□□□ -2.08
COPS3-202ENST00000417352 ROMO1P60602 79 aa2.02□□□□□ -2.09
COPS3-202ENST00000417352 MUC5ACP98088 5654 aa1.94□□□□□ -2.1
COPS3-202ENST00000417352 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
COPS3-202ENST00000417352 AHNAKQ09666 5890 aaKnown RBP1.89□□□□□ -2.11
COPS3-202ENST00000417352 MUC5BQ9HC84 5762 aaPredicted RBP1.89□□□□□ -2.11
COPS3-202ENST00000417352 LCE3DQ9BYE3 92 aa1.87□□□□□ -2.11
COPS3-202ENST00000417352 BRK1Q8WUW1 75 aa1.86□□□□□ -2.11
COPS3-202ENST00000417352 KRTAP21-2Q3LI59 83 aa1.59□□□□□ -2.15
COPS3-202ENST00000417352 INE1O15225 51 aa1.55□□□□□ -2.16
COPS3-202ENST00000417352 PHGR1C9JFL3 82 aa1.43□□□□□ -2.18
COPS3-202ENST00000417352 KRTAP21-1Q3LI58 79 aa1.06□□□□□ -2.24
COPS3-202ENST00000417352 PRM1P04553 51 aa1.04□□□□□ -2.24
COPS3-202ENST00000417352 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 72.4 ms