RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 LCE1DQ5T752 114 aa8.93□□□□□ -0.98
VEGFA-208ENST00000417285 SVIPQ8NHG7 77 aa8.84□□□□□ -0.99
VEGFA-208ENST00000417285 HMCN1Q96RW7 5635 aa8.84□□□□□ -0.99
VEGFA-208ENST00000417285 UQCR11O14957 56 aa8.81□□□□□ -1
VEGFA-208ENST00000417285 MT4P47944 62 aa8.8□□□□□ -1
VEGFA-208ENST00000417285 KRTAP4-3Q9BYR4 195 aa8.73□□□□□ -1.01
VEGFA-208ENST00000417285 KRTAP5-4Q6L8H1 288 aa8.71□□□□□ -1.02
VEGFA-208ENST00000417285 KRTAP12-3P60328 96 aa8.66□□□□□ -1.02
VEGFA-208ENST00000417285 MIR22HGQ0VDD5 57 aa8.59□□□□□ -1.03
VEGFA-208ENST00000417285 KRTAP4-6Q9BYQ5 205 aa8.54□□□□□ -1.04
VEGFA-208ENST00000417285 AHNAK2Q8IVF2 5795 aa8.52□□□□□ -1.05
VEGFA-208ENST00000417285 KRTAP25-1Q3LHN0 102 aa8.51□□□□□ -1.05
VEGFA-208ENST00000417285 K7ERS5 55 aa8.49□□□□□ -1.05
VEGFA-208ENST00000417285 KRTAP4-7Q9BYR0 210 aa8.49□□□□□ -1.05
VEGFA-208ENST00000417285 V9GYY9 64 aa8.46□□□□□ -1.06
VEGFA-208ENST00000417285 Q1T7F1 81 aa8.41□□□□□ -1.06
VEGFA-208ENST00000417285 PCP4P48539 62 aa8.4□□□□□ -1.06
VEGFA-208ENST00000417285 KRTAP5-10Q6L8G5 202 aa8.4□□□□□ -1.06
VEGFA-208ENST00000417285 PSPHP1O15172 72 aa8.36□□□□□ -1.07
VEGFA-208ENST00000417285 KRTAP5-5Q701N2 237 aaPredicted RBP8.27□□□□□ -1.09
VEGFA-208ENST00000417285 KRTAP19-4Q3LI73 84 aa8.25□□□□□ -1.09
VEGFA-208ENST00000417285 RPS28P62857 69 aaKnown RBP8.23□□□□□ -1.09
VEGFA-208ENST00000417285 SPRR5A0A1B0GTR4 108 aa8.21□□□□□ -1.1
VEGFA-208ENST00000417285 KRTAP20-2Q3LI61 65 aa8.21□□□□□ -1.1
VEGFA-208ENST00000417285 KRTAP23-1A1A580 65 aa8.19□□□□□ -1.1
VEGFA-208ENST00000417285 KRTAP12-4P60329 112 aa8.18□□□□□ -1.1
VEGFA-208ENST00000417285 KRTAP5-3Q6L8H2 238 aa8.17□□□□□ -1.1
VEGFA-208ENST00000417285 KRTAP5-7Q6L8G8 165 aa8.12□□□□□ -1.11
VEGFA-208ENST00000417285 A6NED7 52 aa8.1□□□□□ -1.11
VEGFA-208ENST00000417285 KRTAP15-1Q3LI76 137 aa8.07□□□□□ -1.12
VEGFA-208ENST00000417285 LOC100996750A0A140TA64 210 aa8.05□□□□□ -1.12
VEGFA-208ENST00000417285 CDC42SE1Q9NRR8 79 aa8□□□□□ -1.13
VEGFA-208ENST00000417285 LCE3CQ5T5A8 94 aa7.96□□□□□ -1.14
VEGFA-208ENST00000417285 SYNE1Q8NF91 8797 aaKnown RBP7.95□□□□□ -1.14
VEGFA-208ENST00000417285 ROMO1P60602 79 aa7.85□□□□□ -1.15
VEGFA-208ENST00000417285 MT1AP04731 61 aa7.65□□□□□ -1.18
VEGFA-208ENST00000417285 KRTAP6-1Q3LI64 71 aa7.6□□□□□ -1.19
VEGFA-208ENST00000417285 KRTAP5-2Q701N4 177 aa7.58□□□□□ -1.2
VEGFA-208ENST00000417285 KRTAP4-11Q9BYQ6 195 aa7.57□□□□□ -1.2
VEGFA-208ENST00000417285 KRTAP9-6A8MVA2 160 aa7.47□□□□□ -1.21
VEGFA-208ENST00000417285 KRTAP9-4Q9BYQ2 154 aa7.45□□□□□ -1.22
VEGFA-208ENST00000417285 KRTAP6-2Q3LI66 62 aa7.31□□□□□ -1.24
VEGFA-208ENST00000417285 KRTAP5-8O75690 187 aa7.29□□□□□ -1.24
VEGFA-208ENST00000417285 BRK1Q8WUW1 75 aa7.26□□□□□ -1.25
VEGFA-208ENST00000417285 OBSCNQ5VST9 7968 aa7.13□□□□□ -1.27
VEGFA-208ENST00000417285 AHNAKQ09666 5890 aaKnown RBP7.11□□□□□ -1.27
VEGFA-208ENST00000417285 MUC5ACP98088 5654 aa7.09□□□□□ -1.28
VEGFA-208ENST00000417285 MUC5BQ9HC84 5762 aaPredicted RBP7.08□□□□□ -1.28
VEGFA-208ENST00000417285 MT3P25713 68 aa7.06□□□□□ -1.28
VEGFA-208ENST00000417285 KRTAP9-9Q9BYP9 154 aa7□□□□□ -1.29
VEGFA-208ENST00000417285 PRO0628Q9UI54 55 aa6.89□□□□□ -1.31
VEGFA-208ENST00000417285 PMAIP1Q13794 54 aa6.84□□□□□ -1.31
VEGFA-208ENST00000417285 KRTAP5-1Q6L8H4 278 aa6.83□□□□□ -1.32
VEGFA-208ENST00000417285 LCE1EQ5T753 118 aa6.55□□□□□ -1.36
VEGFA-208ENST00000417285 PRAC1Q96KF2 57 aa6.52□□□□□ -1.37
VEGFA-208ENST00000417285 KTN1-AS1Q86SY8 53 aa6.24□□□□□ -1.41
VEGFA-208ENST00000417285 H3BS24 57 aa6.15□□□□□ -1.42
VEGFA-208ENST00000417285 KRTAP4-2Q9BYR5 136 aa6.12□□□□□ -1.43
VEGFA-208ENST00000417285 LCE1BQ5T7P3 118 aa6.11□□□□□ -1.43
VEGFA-208ENST00000417285 LCE1CQ5T751 118 aa6.06□□□□□ -1.44
VEGFA-208ENST00000417285 LCE3DQ9BYE3 92 aa5.74□□□□□ -1.49
VEGFA-208ENST00000417285 A0A0A0MQY5 61 aa5.64□□□□□ -1.51
VEGFA-208ENST00000417285 KRTAP4-12Q9BQ66 201 aa5.6□□□□□ -1.51
VEGFA-208ENST00000417285 LUZP6Q538Z0 58 aa5.48□□□□□ -1.53
VEGFA-208ENST00000417285 KRTAP5-11Q6L8G4 156 aa5.48□□□□□ -1.53
VEGFA-208ENST00000417285 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.48□□□□□ -1.53
VEGFA-208ENST00000417285 LCE1FQ5T754 118 aa5.43□□□□□ -1.54
VEGFA-208ENST00000417285 LCE3EQ5T5B0 92 aa5.39□□□□□ -1.55
VEGFA-208ENST00000417285 KRTAP21-2Q3LI59 83 aa5.02□□□□□ -1.61
VEGFA-208ENST00000417285 NDUFAF8A1L188 74 aa4.97□□□□□ -1.61
VEGFA-208ENST00000417285 PHGR1C9JFL3 82 aa4.9□□□□□ -1.63
VEGFA-208ENST00000417285 KRTAP4-4Q9BYR3 166 aa4.59□□□□□ -1.67
VEGFA-208ENST00000417285 MUC19Q7Z5P9 8384 aa4.42□□□□□ -1.7
VEGFA-208ENST00000417285 INE1O15225 51 aa4.33□□□□□ -1.72
VEGFA-208ENST00000417285 PRM1P04553 51 aa4□□□□□ -1.77
VEGFA-208ENST00000417285 KRTAP21-1Q3LI58 79 aa3.77□□□□□ -1.81
VEGFA-208ENST00000417285 MUC16Q8WXI7 14507 aa3.09□□□□□ -1.92
Retrieved 77 of 20,778 RNA–protein pairs in 12.2 ms