RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 KRTAP5-4Q6L8H1 288 aa7.54□□□□□ -1.2
ACTB-203ENST00000417101 KRTAP4-6Q9BYQ5 205 aa7.47□□□□□ -1.21
ACTB-203ENST00000417101 KRTAP5-10Q6L8G5 202 aa7.39□□□□□ -1.23
ACTB-203ENST00000417101 KRTAP4-7Q9BYR0 210 aa7.37□□□□□ -1.23
ACTB-203ENST00000417101 KRTAP12-3P60328 96 aa7.32□□□□□ -1.24
ACTB-203ENST00000417101 PRR15LQ9BU68 103 aa7.29□□□□□ -1.24
ACTB-203ENST00000417101 ANAPC13Q9BS18 74 aa7.25□□□□□ -1.25
ACTB-203ENST00000417101 KRTAP5-3Q6L8H2 238 aa7.17□□□□□ -1.26
ACTB-203ENST00000417101 KRTAP20-2Q3LI61 65 aa7.15□□□□□ -1.26
ACTB-203ENST00000417101 LINC01558Q9Y6Z2 57 aa7.15□□□□□ -1.26
ACTB-203ENST00000417101 CCDC179H3BU77 68 aa7.14□□□□□ -1.27
ACTB-203ENST00000417101 KRTAP5-7Q6L8G8 165 aa7.13□□□□□ -1.27
ACTB-203ENST00000417101 KRTAP5-5Q701N2 237 aaPredicted RBP7.13□□□□□ -1.27
ACTB-203ENST00000417101 ATP5EP56381 51 aaPredicted RBP7.11□□□□□ -1.27
ACTB-203ENST00000417101 SPRR5A0A1B0GTR4 108 aa7.07□□□□□ -1.28
ACTB-203ENST00000417101 UQCR11O14957 56 aa7.04□□□□□ -1.28
ACTB-203ENST00000417101 KRTAP12-4P60329 112 aa7.03□□□□□ -1.28
ACTB-203ENST00000417101 LOC100996750A0A140TA64 210 aa6.99□□□□□ -1.29
ACTB-203ENST00000417101 KRTAP25-1Q3LHN0 102 aa6.99□□□□□ -1.29
ACTB-203ENST00000417101 SYNE1Q8NF91 8797 aaKnown RBP6.99□□□□□ -1.29
ACTB-203ENST00000417101 MIR22HGQ0VDD5 57 aa6.86□□□□□ -1.31
ACTB-203ENST00000417101 KRTAP19-4Q3LI73 84 aa6.83□□□□□ -1.32
ACTB-203ENST00000417101 TMEM258P61165 79 aa6.81□□□□□ -1.32
ACTB-203ENST00000417101 K7ERS5 55 aa6.79□□□□□ -1.32
ACTB-203ENST00000417101 KRTAP15-1Q3LI76 137 aa6.75□□□□□ -1.33
ACTB-203ENST00000417101 LCE3CQ5T5A8 94 aa6.71□□□□□ -1.34
ACTB-203ENST00000417101 KRTAP23-1A1A580 65 aa6.68□□□□□ -1.34
ACTB-203ENST00000417101 PSPHP1O15172 72 aa6.59□□□□□ -1.35
ACTB-203ENST00000417101 KRTAP4-11Q9BYQ6 195 aa6.59□□□□□ -1.35
ACTB-203ENST00000417101 MT1AP04731 61 aa6.57□□□□□ -1.36
ACTB-203ENST00000417101 KRTAP6-1Q3LI64 71 aa6.56□□□□□ -1.36
ACTB-203ENST00000417101 KRTAP5-2Q701N4 177 aa6.56□□□□□ -1.36
ACTB-203ENST00000417101 V9GYY9 64 aa6.51□□□□□ -1.37
ACTB-203ENST00000417101 Q1T7F1 81 aa6.46□□□□□ -1.38
ACTB-203ENST00000417101 CDC42SE1Q9NRR8 79 aa6.39□□□□□ -1.39
ACTB-203ENST00000417101 AHNAKQ09666 5890 aaKnown RBP6.38□□□□□ -1.39
ACTB-203ENST00000417101 KRTAP9-4Q9BYQ2 154 aa6.38□□□□□ -1.39
ACTB-203ENST00000417101 KRTAP5-8O75690 187 aa6.37□□□□□ -1.39
ACTB-203ENST00000417101 KRTAP9-6A8MVA2 160 aa6.36□□□□□ -1.39
ACTB-203ENST00000417101 A6NED7 52 aa6.34□□□□□ -1.39
ACTB-203ENST00000417101 OBSCNQ5VST9 7968 aa6.33□□□□□ -1.4
ACTB-203ENST00000417101 KRTAP6-2Q3LI66 62 aa6.33□□□□□ -1.4
ACTB-203ENST00000417101 RPS28P62857 69 aaKnown RBP6.31□□□□□ -1.4
ACTB-203ENST00000417101 MUC5ACP98088 5654 aa6.31□□□□□ -1.4
ACTB-203ENST00000417101 MUC5BQ9HC84 5762 aaPredicted RBP6.3□□□□□ -1.4
ACTB-203ENST00000417101 ROMO1P60602 79 aa6.28□□□□□ -1.4
ACTB-203ENST00000417101 KRTAP9-9Q9BYP9 154 aa6.09□□□□□ -1.43
ACTB-203ENST00000417101 MT3P25713 68 aa6.03□□□□□ -1.44
ACTB-203ENST00000417101 KRTAP5-1Q6L8H4 278 aa5.94□□□□□ -1.46
ACTB-203ENST00000417101 PCP4P48539 62 aa5.62□□□□□ -1.51
ACTB-203ENST00000417101 LCE1EQ5T753 118 aa5.58□□□□□ -1.52
ACTB-203ENST00000417101 LCE1BQ5T7P3 118 aa5.32□□□□□ -1.56
ACTB-203ENST00000417101 KRTAP4-2Q9BYR5 136 aa5.31□□□□□ -1.56
ACTB-203ENST00000417101 LCE1CQ5T751 118 aa5.18□□□□□ -1.58
ACTB-203ENST00000417101 BRK1Q8WUW1 75 aa5.08□□□□□ -1.6
ACTB-203ENST00000417101 KRTAP4-12Q9BQ66 201 aa4.94□□□□□ -1.62
ACTB-203ENST00000417101 LCE3DQ9BYE3 92 aa4.79□□□□□ -1.64
ACTB-203ENST00000417101 PMAIP1Q13794 54 aa4.74□□□□□ -1.65
ACTB-203ENST00000417101 KRTAP5-11Q6L8G4 156 aa4.72□□□□□ -1.65
ACTB-203ENST00000417101 PRAC1Q96KF2 57 aa4.69□□□□□ -1.66
ACTB-203ENST00000417101 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.67□□□□□ -1.66
ACTB-203ENST00000417101 LCE1FQ5T754 118 aa4.64□□□□□ -1.67
ACTB-203ENST00000417101 LCE3EQ5T5B0 92 aa4.45□□□□□ -1.7
ACTB-203ENST00000417101 PRO0628Q9UI54 55 aa4.38□□□□□ -1.71
ACTB-203ENST00000417101 PHGR1C9JFL3 82 aa4.33□□□□□ -1.72
ACTB-203ENST00000417101 KRTAP21-2Q3LI59 83 aa4.32□□□□□ -1.72
ACTB-203ENST00000417101 KTN1-AS1Q86SY8 53 aa4.16□□□□□ -1.74
ACTB-203ENST00000417101 KRTAP4-4Q9BYR3 166 aa4.03□□□□□ -1.76
ACTB-203ENST00000417101 LUZP6Q538Z0 58 aa4□□□□□ -1.77
ACTB-203ENST00000417101 SVIPQ8NHG7 77 aa3.95□□□□□ -1.78
ACTB-203ENST00000417101 MUC19Q7Z5P9 8384 aa3.95□□□□□ -1.78
ACTB-203ENST00000417101 KRTAP21-1Q3LI58 79 aa3.28□□□□□ -1.88
ACTB-203ENST00000417101 PRM1P04553 51 aa3.2□□□□□ -1.9
ACTB-203ENST00000417101 NDUFAF8A1L188 74 aa3.08□□□□□ -1.92
ACTB-203ENST00000417101 H3BS24 57 aa2.94□□□□□ -1.94
ACTB-203ENST00000417101 A0A0A0MQY5 61 aa2.91□□□□□ -1.94
ACTB-203ENST00000417101 MUC16Q8WXI7 14507 aa2.67□□□□□ -1.98
ACTB-203ENST00000417101 INE1O15225 51 aa2.51□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 11.5 ms