RNA–Protein interactions for RNA: ENST00000416603.1

THUMPD3-202, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-202ENST00000416603 MACF1Q9UPN3 7388 aaKnown RBP3.19□□□□□ -1.9
THUMPD3-202ENST00000416603 KRTAP19-6Q3LI70 58 aa3.18□□□□□ -1.9
THUMPD3-202ENST00000416603 LCE3AQ5TA76 89 aa3.16□□□□□ -1.9
THUMPD3-202ENST00000416603 CSAG1Q6PB30 78 aa3.16□□□□□ -1.9
THUMPD3-202ENST00000416603 PRO2289Q9P1D8 64 aa3.16□□□□□ -1.9
THUMPD3-202ENST00000416603 SYNE2Q8WXH0 6885 aaKnown RBP3.15□□□□□ -1.91
THUMPD3-202ENST00000416603 H0YAA0 97 aa3.12□□□□□ -1.91
THUMPD3-202ENST00000416603 H1FX-AS1Q4G0G2 97 aa3.12□□□□□ -1.91
THUMPD3-202ENST00000416603 P0C880 135 aa3.11□□□□□ -1.91
THUMPD3-202ENST00000416603 KRTAP6-3Q3LI67 103 aa3.11□□□□□ -1.91
THUMPD3-202ENST00000416603 OBSCNQ5VST9 7968 aa3.11□□□□□ -1.91
THUMPD3-202ENST00000416603 KRTAP4-3Q9BYR4 195 aa3.05□□□□□ -1.92
THUMPD3-202ENST00000416603 KRTAP20-1Q3LI63 56 aa2.98□□□□□ -1.93
THUMPD3-202ENST00000416603 NEBP20929 6669 aa2.97□□□□□ -1.93
THUMPD3-202ENST00000416603 MT1BP07438 61 aa2.97□□□□□ -1.93
THUMPD3-202ENST00000416603 S4R3F8 94 aa2.97□□□□□ -1.93
THUMPD3-202ENST00000416603 KRTAP19-8Q3LI54 63 aa2.94□□□□□ -1.94
THUMPD3-202ENST00000416603 CRIPTQ9P021 101 aa2.94□□□□□ -1.94
THUMPD3-202ENST00000416603 MUC12Q9UKN1 5478 aa2.94□□□□□ -1.94
THUMPD3-202ENST00000416603 SPRR2GQ9BYE4 73 aa2.93□□□□□ -1.94
THUMPD3-202ENST00000416603 M0QZ58 72 aa2.92□□□□□ -1.94
THUMPD3-202ENST00000416603 KRTAP5-5Q701N2 237 aaPredicted RBP2.88□□□□□ -1.95
THUMPD3-202ENST00000416603 KRTAP13-4Q3LI77 160 aa2.85□□□□□ -1.95
THUMPD3-202ENST00000416603 KRTAP2-3P0C7H8 128 aa2.84□□□□□ -1.95
THUMPD3-202ENST00000416603 KRTAP2-4Q9BYR9 128 aa2.84□□□□□ -1.95
THUMPD3-202ENST00000416603 KMT2DO14686 5537 aa2.84□□□□□ -1.96
THUMPD3-202ENST00000416603 A0A0D9SG42 100 aa2.83□□□□□ -1.96
THUMPD3-202ENST00000416603 SPRR2EP22531 72 aa2.83□□□□□ -1.96
THUMPD3-202ENST00000416603 SPRR2BP35325 72 aa2.83□□□□□ -1.96
THUMPD3-202ENST00000416603 SPRR2AP35326 72 aa2.83□□□□□ -1.96
THUMPD3-202ENST00000416603 KRTAP12-1P59990 96 aa2.83□□□□□ -1.96
THUMPD3-202ENST00000416603 SPRR2FQ96RM1 72 aa2.83□□□□□ -1.96
THUMPD3-202ENST00000416603 MDN1Q9NU22 5596 aa2.82□□□□□ -1.96
THUMPD3-202ENST00000416603 PP632Q6XCG6 107 aa2.79□□□□□ -1.96
THUMPD3-202ENST00000416603 KRTAP8-1Q8IUC2 63 aa2.77□□□□□ -1.97
THUMPD3-202ENST00000416603 INE1O15225 51 aa2.76□□□□□ -1.97
THUMPD3-202ENST00000416603 PLAC4Q8WY50 150 aa2.76□□□□□ -1.97
THUMPD3-202ENST00000416603 MT1XP80297 61 aa2.75□□□□□ -1.97
THUMPD3-202ENST00000416603 KRTAP5-2Q701N4 177 aa2.75□□□□□ -1.97
THUMPD3-202ENST00000416603 C10orf95Q9H7T3 257 aa2.75□□□□□ -1.97
THUMPD3-202ENST00000416603 SPRR5A0A1B0GTR4 108 aa2.74□□□□□ -1.97
THUMPD3-202ENST00000416603 SPRR2DP22532 72 aa2.74□□□□□ -1.97
THUMPD3-202ENST00000416603 KRTAP2-1Q9BYU5 128 aa2.74□□□□□ -1.97
THUMPD3-202ENST00000416603 LCE1CQ5T751 118 aa2.72□□□□□ -1.97
THUMPD3-202ENST00000416603 LCE1BQ5T7P3 118 aa2.72□□□□□ -1.97
THUMPD3-202ENST00000416603 LCE3DQ9BYE3 92 aa2.71□□□□□ -1.98
THUMPD3-202ENST00000416603 TNP1P09430 55 aa2.58□□□□□ -2
THUMPD3-202ENST00000416603 GPR98Q8WXG9 6306 aa2.53□□□□□ -2.01
THUMPD3-202ENST00000416603 DSTQ03001 7570 aaKnown RBP2.49□□□□□ -2.01
THUMPD3-202ENST00000416603 KRTAP19-7Q3SYF9 63 aa2.46□□□□□ -2.02
THUMPD3-202ENST00000416603 KRTAP19-3Q7Z4W3 81 aa2.46□□□□□ -2.02
THUMPD3-202ENST00000416603 MT1EP04732 61 aa2.45□□□□□ -2.02
THUMPD3-202ENST00000416603 MT4P47944 62 aa2.4□□□□□ -2.03
THUMPD3-202ENST00000416603 MT1GP13640 62 aa2.38□□□□□ -2.03
THUMPD3-202ENST00000416603 KRTAP19-5Q3LI72 72 aa2.38□□□□□ -2.03
THUMPD3-202ENST00000416603 MT1MQ8N339 61 aa2.35□□□□□ -2.03
THUMPD3-202ENST00000416603 HMCN1Q96RW7 5635 aa2.34□□□□□ -2.03
THUMPD3-202ENST00000416603 AHNAK2Q8IVF2 5795 aa2.32□□□□□ -2.04
THUMPD3-202ENST00000416603 MT1LQ93083 61 aa2.32□□□□□ -2.04
THUMPD3-202ENST00000416603 KRTAP5-10Q6L8G5 202 aa2.3□□□□□ -2.04
THUMPD3-202ENST00000416603 KRTAP5-8O75690 187 aa2.25□□□□□ -2.05
THUMPD3-202ENST00000416603 KRTAP12-3P60328 96 aa2.25□□□□□ -2.05
THUMPD3-202ENST00000416603 KRTAP5-7Q6L8G8 165 aa2.25□□□□□ -2.05
THUMPD3-202ENST00000416603 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
THUMPD3-202ENST00000416603 KRTAP20-2Q3LI61 65 aa2.19□□□□□ -2.06
THUMPD3-202ENST00000416603 KRTAP12-4P60329 112 aa2.15□□□□□ -2.07
THUMPD3-202ENST00000416603 SYNE1Q8NF91 8797 aaKnown RBP2.09□□□□□ -2.07
THUMPD3-202ENST00000416603 MT1AP04731 61 aa1.98□□□□□ -2.09
THUMPD3-202ENST00000416603 KRTAP6-1Q3LI64 71 aa1.98□□□□□ -2.09
THUMPD3-202ENST00000416603 KRTAP21-2Q3LI59 83 aa1.94□□□□□ -2.1
THUMPD3-202ENST00000416603 MUC5ACP98088 5654 aa1.93□□□□□ -2.1
THUMPD3-202ENST00000416603 AHNAKQ09666 5890 aaKnown RBP1.92□□□□□ -2.1
THUMPD3-202ENST00000416603 KRTAP6-2Q3LI66 62 aa1.91□□□□□ -2.1
THUMPD3-202ENST00000416603 MUC5BQ9HC84 5762 aaPredicted RBP1.89□□□□□ -2.11
THUMPD3-202ENST00000416603 PRM1P04553 51 aa1.56□□□□□ -2.16
THUMPD3-202ENST00000416603 PHGR1C9JFL3 82 aa1.38□□□□□ -2.19
THUMPD3-202ENST00000416603 KRTAP21-1Q3LI58 79 aa1.07□□□□□ -2.24
THUMPD3-202ENST00000416603 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 39.9 ms