RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 A0A1B0GU69 56 aa5.57□□□□□ -1.52
UBXN4-203ENST00000416538 KRTAP12-1P59990 96 aa5.56□□□□□ -1.52
UBXN4-203ENST00000416538 KRTAP19-5Q3LI72 72 aa5.52□□□□□ -1.53
UBXN4-203ENST00000416538 SMIM26A0A096LP01 95 aa5.51□□□□□ -1.53
UBXN4-203ENST00000416538 CCDC179H3BU77 68 aa5.49□□□□□ -1.53
UBXN4-203ENST00000416538 ATP5EP56381 51 aaPredicted RBP5.45□□□□□ -1.54
UBXN4-203ENST00000416538 A8MU10 97 aa5.43□□□□□ -1.54
UBXN4-203ENST00000416538 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.43□□□□□ -1.54
UBXN4-203ENST00000416538 MT1GP13640 62 aa5.42□□□□□ -1.54
UBXN4-203ENST00000416538 PRR15LQ9BU68 103 aa5.42□□□□□ -1.54
UBXN4-203ENST00000416538 KRTAP5-11Q6L8G4 156 aa5.41□□□□□ -1.54
UBXN4-203ENST00000416538 MT1MQ8N339 61 aa5.39□□□□□ -1.55
UBXN4-203ENST00000416538 MT1LQ93083 61 aa5.39□□□□□ -1.55
UBXN4-203ENST00000416538 GPR98Q8WXG9 6306 aa5.37□□□□□ -1.55
UBXN4-203ENST00000416538 LCE3AQ5TA76 89 aa5.35□□□□□ -1.55
UBXN4-203ENST00000416538 C10orf95Q9H7T3 257 aa5.35□□□□□ -1.55
UBXN4-203ENST00000416538 LINC01558Q9Y6Z2 57 aa5.34□□□□□ -1.55
UBXN4-203ENST00000416538 KRTAP4-3Q9BYR4 195 aa5.33□□□□□ -1.56
UBXN4-203ENST00000416538 PP632Q6XCG6 107 aa5.32□□□□□ -1.56
UBXN4-203ENST00000416538 TNP1P09430 55 aa5.3□□□□□ -1.56
UBXN4-203ENST00000416538 TMEM258P61165 79 aa5.3□□□□□ -1.56
UBXN4-203ENST00000416538 MT3P25713 68 aa5.27□□□□□ -1.57
UBXN4-203ENST00000416538 MT4P47944 62 aa5.26□□□□□ -1.57
UBXN4-203ENST00000416538 UQCR11O14957 56 aa5.23□□□□□ -1.57
UBXN4-203ENST00000416538 LCE1EQ5T753 118 aa5.21□□□□□ -1.58
UBXN4-203ENST00000416538 KRTAP5-4Q6L8H1 288 aa5.21□□□□□ -1.58
UBXN4-203ENST00000416538 HMCN1Q96RW7 5635 aa5.2□□□□□ -1.58
UBXN4-203ENST00000416538 MIR22HGQ0VDD5 57 aa5.11□□□□□ -1.59
UBXN4-203ENST00000416538 KRTAP12-3P60328 96 aa5.1□□□□□ -1.59
UBXN4-203ENST00000416538 AHNAK2Q8IVF2 5795 aa5.09□□□□□ -1.59
UBXN4-203ENST00000416538 V9GYY9 64 aa5.05□□□□□ -1.6
UBXN4-203ENST00000416538 K7ERS5 55 aa5.04□□□□□ -1.6
UBXN4-203ENST00000416538 KRTAP5-10Q6L8G5 202 aa5.02□□□□□ -1.61
UBXN4-203ENST00000416538 PSPHP1O15172 72 aa5.01□□□□□ -1.61
UBXN4-203ENST00000416538 KRTAP25-1Q3LHN0 102 aa5□□□□□ -1.61
UBXN4-203ENST00000416538 Q1T7F1 81 aa4.99□□□□□ -1.61
UBXN4-203ENST00000416538 KRTAP5-5Q701N2 237 aaPredicted RBP4.98□□□□□ -1.61
UBXN4-203ENST00000416538 KRTAP20-2Q3LI61 65 aa4.91□□□□□ -1.62
UBXN4-203ENST00000416538 PRAC1Q96KF2 57 aa4.87□□□□□ -1.63
UBXN4-203ENST00000416538 A6NED7 52 aa4.85□□□□□ -1.63
UBXN4-203ENST00000416538 SPRR5A0A1B0GTR4 108 aa4.83□□□□□ -1.64
UBXN4-203ENST00000416538 NDUFAF8A1L188 74 aa4.83□□□□□ -1.64
UBXN4-203ENST00000416538 SYNE1Q8NF91 8797 aaKnown RBP4.82□□□□□ -1.64
UBXN4-203ENST00000416538 KRTAP5-7Q6L8G8 165 aa4.82□□□□□ -1.64
UBXN4-203ENST00000416538 KRTAP12-4P60329 112 aa4.75□□□□□ -1.65
UBXN4-203ENST00000416538 CDC42SE1Q9NRR8 79 aa4.75□□□□□ -1.65
UBXN4-203ENST00000416538 KRTAP5-1Q6L8H4 278 aa4.74□□□□□ -1.65
UBXN4-203ENST00000416538 RPS28P62857 69 aaKnown RBP4.73□□□□□ -1.65
UBXN4-203ENST00000416538 LCE3CQ5T5A8 94 aa4.68□□□□□ -1.66
UBXN4-203ENST00000416538 ROMO1P60602 79 aa4.67□□□□□ -1.66
UBXN4-203ENST00000416538 KRTAP9-6A8MVA2 160 aa4.58□□□□□ -1.68
UBXN4-203ENST00000416538 KRTAP6-1Q3LI64 71 aa4.58□□□□□ -1.68
UBXN4-203ENST00000416538 MT1AP04731 61 aa4.57□□□□□ -1.68
UBXN4-203ENST00000416538 KRTAP5-2Q701N4 177 aa4.56□□□□□ -1.68
UBXN4-203ENST00000416538 LCE1FQ5T754 118 aa4.55□□□□□ -1.68
UBXN4-203ENST00000416538 KRTAP4-4Q9BYR3 166 aa4.53□□□□□ -1.68
UBXN4-203ENST00000416538 KRTAP5-8O75690 187 aa4.37□□□□□ -1.71
UBXN4-203ENST00000416538 KRTAP6-2Q3LI66 62 aa4.37□□□□□ -1.71
UBXN4-203ENST00000416538 OBSCNQ5VST9 7968 aa4.27□□□□□ -1.73
UBXN4-203ENST00000416538 MUC5ACP98088 5654 aa4.18□□□□□ -1.74
UBXN4-203ENST00000416538 MUC5BQ9HC84 5762 aaPredicted RBP4.15□□□□□ -1.74
UBXN4-203ENST00000416538 BRK1Q8WUW1 75 aa4.15□□□□□ -1.75
UBXN4-203ENST00000416538 AHNAKQ09666 5890 aaKnown RBP4.15□□□□□ -1.75
UBXN4-203ENST00000416538 PMAIP1Q13794 54 aa3.91□□□□□ -1.78
UBXN4-203ENST00000416538 LCE3EQ5T5B0 92 aa3.9□□□□□ -1.79
UBXN4-203ENST00000416538 LCE1BQ5T7P3 118 aa3.63□□□□□ -1.83
UBXN4-203ENST00000416538 PRO0628Q9UI54 55 aa3.58□□□□□ -1.84
UBXN4-203ENST00000416538 LCE1CQ5T751 118 aa3.55□□□□□ -1.84
UBXN4-203ENST00000416538 KTN1-AS1Q86SY8 53 aa3.43□□□□□ -1.86
UBXN4-203ENST00000416538 LCE3DQ9BYE3 92 aa3.37□□□□□ -1.87
UBXN4-203ENST00000416538 LUZP6Q538Z0 58 aa3.23□□□□□ -1.89
UBXN4-203ENST00000416538 KRTAP21-2Q3LI59 83 aa3.03□□□□□ -1.92
UBXN4-203ENST00000416538 PHGR1C9JFL3 82 aa2.89□□□□□ -1.95
UBXN4-203ENST00000416538 MUC19Q7Z5P9 8384 aa2.82□□□□□ -1.96
UBXN4-203ENST00000416538 PRM1P04553 51 aa2.37□□□□□ -2.03
UBXN4-203ENST00000416538 KRTAP21-1Q3LI58 79 aa2.16□□□□□ -2.06
UBXN4-203ENST00000416538 INE1O15225 51 aa2.02□□□□□ -2.09
UBXN4-203ENST00000416538 MUC16Q8WXI7 14507 aa1.9□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 112.5 ms