RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 LCE5AQ5TCM9 118 aa6.58□□□□□ -1.36
SEMA3B-201ENST00000416295 A6NED7 52 aa6.56□□□□□ -1.36
SEMA3B-201ENST00000416295 KRTAP25-1Q3LHN0 102 aa6.48□□□□□ -1.37
SEMA3B-201ENST00000416295 MT1GP13640 62 aa6.47□□□□□ -1.37
SEMA3B-201ENST00000416295 PP632Q6XCG6 107 aa6.45□□□□□ -1.38
SEMA3B-201ENST00000416295 MT1LQ93083 61 aa6.43□□□□□ -1.38
SEMA3B-201ENST00000416295 DSTQ03001 7570 aaKnown RBP6.4□□□□□ -1.38
SEMA3B-201ENST00000416295 KRTAP12-3P60328 96 aa6.37□□□□□ -1.39
SEMA3B-201ENST00000416295 MT1MQ8N339 61 aa6.35□□□□□ -1.39
SEMA3B-201ENST00000416295 SVIPQ8NHG7 77 aa6.35□□□□□ -1.39
SEMA3B-201ENST00000416295 CDC42SE1Q9NRR8 79 aa6.31□□□□□ -1.4
SEMA3B-201ENST00000416295 GPR98Q8WXG9 6306 aa6.28□□□□□ -1.4
SEMA3B-201ENST00000416295 KRTAP23-1A1A580 65 aa6.25□□□□□ -1.41
SEMA3B-201ENST00000416295 KRTAP4-9Q9BYQ8 210 aa6.25□□□□□ -1.41
SEMA3B-201ENST00000416295 ROMO1P60602 79 aa6.21□□□□□ -1.42
SEMA3B-201ENST00000416295 KRTAP4-3Q9BYR4 195 aa6.15□□□□□ -1.42
SEMA3B-201ENST00000416295 LCE1DQ5T752 114 aa6.12□□□□□ -1.43
SEMA3B-201ENST00000416295 LCE4AQ5TA78 99 aa6.12□□□□□ -1.43
SEMA3B-201ENST00000416295 KRTAP4-7Q9BYR0 210 aa6.08□□□□□ -1.44
SEMA3B-201ENST00000416295 KRTAP19-4Q3LI73 84 aa6.07□□□□□ -1.44
SEMA3B-201ENST00000416295 MT4P47944 62 aa6.03□□□□□ -1.44
SEMA3B-201ENST00000416295 KRTAP15-1Q3LI76 137 aa6.03□□□□□ -1.44
SEMA3B-201ENST00000416295 HMCN1Q96RW7 5635 aa6.03□□□□□ -1.44
SEMA3B-201ENST00000416295 KRTAP5-4Q6L8H1 288 aa5.95□□□□□ -1.46
SEMA3B-201ENST00000416295 LCE3CQ5T5A8 94 aa5.88□□□□□ -1.47
SEMA3B-201ENST00000416295 BRK1Q8WUW1 75 aa5.86□□□□□ -1.47
SEMA3B-201ENST00000416295 AHNAK2Q8IVF2 5795 aa5.85□□□□□ -1.47
SEMA3B-201ENST00000416295 KRTAP4-6Q9BYQ5 205 aa5.82□□□□□ -1.48
SEMA3B-201ENST00000416295 KRTAP5-5Q701N2 237 aaPredicted RBP5.8□□□□□ -1.48
SEMA3B-201ENST00000416295 LOC100996750A0A140TA64 210 aa5.75□□□□□ -1.49
SEMA3B-201ENST00000416295 KRTAP5-10Q6L8G5 202 aa5.75□□□□□ -1.49
SEMA3B-201ENST00000416295 KRTAP12-4P60329 112 aa5.63□□□□□ -1.51
SEMA3B-201ENST00000416295 SPRR5A0A1B0GTR4 108 aa5.62□□□□□ -1.51
SEMA3B-201ENST00000416295 KRTAP20-2Q3LI61 65 aa5.62□□□□□ -1.51
SEMA3B-201ENST00000416295 KRTAP5-3Q6L8H2 238 aa5.59□□□□□ -1.51
SEMA3B-201ENST00000416295 KRTAP5-7Q6L8G8 165 aa5.57□□□□□ -1.52
SEMA3B-201ENST00000416295 PMAIP1Q13794 54 aa5.52□□□□□ -1.53
SEMA3B-201ENST00000416295 KRTAP9-6A8MVA2 160 aa5.5□□□□□ -1.53
SEMA3B-201ENST00000416295 MT1AP04731 61 aa5.48□□□□□ -1.53
SEMA3B-201ENST00000416295 SYNE1Q8NF91 8797 aaKnown RBP5.45□□□□□ -1.54
SEMA3B-201ENST00000416295 KRTAP6-1Q3LI64 71 aa5.41□□□□□ -1.54
SEMA3B-201ENST00000416295 PRO0628Q9UI54 55 aa5.28□□□□□ -1.56
SEMA3B-201ENST00000416295 KRTAP9-4Q9BYQ2 154 aa5.26□□□□□ -1.57
SEMA3B-201ENST00000416295 KRTAP5-2Q701N4 177 aa5.24□□□□□ -1.57
SEMA3B-201ENST00000416295 PRAC1Q96KF2 57 aa5.23□□□□□ -1.57
SEMA3B-201ENST00000416295 KRTAP4-11Q9BYQ6 195 aa5.18□□□□□ -1.58
SEMA3B-201ENST00000416295 KRTAP6-2Q3LI66 62 aa5.14□□□□□ -1.59
SEMA3B-201ENST00000416295 MT3P25713 68 aa5.01□□□□□ -1.61
SEMA3B-201ENST00000416295 KTN1-AS1Q86SY8 53 aa5.01□□□□□ -1.61
SEMA3B-201ENST00000416295 KRTAP5-8O75690 187 aa4.99□□□□□ -1.61
SEMA3B-201ENST00000416295 AHNAKQ09666 5890 aaKnown RBP4.86□□□□□ -1.63
SEMA3B-201ENST00000416295 MUC5ACP98088 5654 aa4.86□□□□□ -1.63
SEMA3B-201ENST00000416295 OBSCNQ5VST9 7968 aa4.84□□□□□ -1.63
SEMA3B-201ENST00000416295 MUC5BQ9HC84 5762 aaPredicted RBP4.83□□□□□ -1.64
SEMA3B-201ENST00000416295 KRTAP9-9Q9BYP9 154 aa4.8□□□□□ -1.64
SEMA3B-201ENST00000416295 KRTAP5-1Q6L8H4 278 aa4.67□□□□□ -1.66
SEMA3B-201ENST00000416295 LCE1EQ5T753 118 aa4.56□□□□□ -1.68
SEMA3B-201ENST00000416295 LUZP6Q538Z0 58 aa4.46□□□□□ -1.7
SEMA3B-201ENST00000416295 A0A0A0MQY5 61 aa4.43□□□□□ -1.7
SEMA3B-201ENST00000416295 H3BS24 57 aa4.43□□□□□ -1.7
SEMA3B-201ENST00000416295 LCE3DQ9BYE3 92 aa4.29□□□□□ -1.72
SEMA3B-201ENST00000416295 LCE1BQ5T7P3 118 aa4.25□□□□□ -1.73
SEMA3B-201ENST00000416295 KRTAP4-2Q9BYR5 136 aa4.25□□□□□ -1.73
SEMA3B-201ENST00000416295 LCE1CQ5T751 118 aa4.22□□□□□ -1.73
SEMA3B-201ENST00000416295 LCE3EQ5T5B0 92 aa4.07□□□□□ -1.76
SEMA3B-201ENST00000416295 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.87□□□□□ -1.79
SEMA3B-201ENST00000416295 KRTAP5-11Q6L8G4 156 aa3.81□□□□□ -1.8
SEMA3B-201ENST00000416295 KRTAP4-12Q9BQ66 201 aa3.81□□□□□ -1.8
SEMA3B-201ENST00000416295 NDUFAF8A1L188 74 aa3.72□□□□□ -1.81
SEMA3B-201ENST00000416295 LCE1FQ5T754 118 aa3.71□□□□□ -1.82
SEMA3B-201ENST00000416295 KRTAP21-2Q3LI59 83 aa3.57□□□□□ -1.84
SEMA3B-201ENST00000416295 PHGR1C9JFL3 82 aa3.37□□□□□ -1.87
SEMA3B-201ENST00000416295 KRTAP4-4Q9BYR3 166 aa3.21□□□□□ -1.9
SEMA3B-201ENST00000416295 PRM1P04553 51 aa3.17□□□□□ -1.9
SEMA3B-201ENST00000416295 INE1O15225 51 aa3.09□□□□□ -1.91
SEMA3B-201ENST00000416295 MUC19Q7Z5P9 8384 aa2.97□□□□□ -1.93
SEMA3B-201ENST00000416295 KRTAP21-1Q3LI58 79 aa2.59□□□□□ -1.99
SEMA3B-201ENST00000416295 MUC16Q8WXI7 14507 aa2.15□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 7.6 ms