RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 COA5Q86WW8 74 aa5.2□□□□□ -1.58
DDX56-202ENST00000415758 LCE3AQ5TA76 89 aa5.19□□□□□ -1.58
DDX56-202ENST00000415758 SERP1Q9Y6X1 66 aa5.19□□□□□ -1.58
DDX56-202ENST00000415758 SEC61GP60059 68 aa5.18□□□□□ -1.58
DDX56-202ENST00000415758 SPRR5A0A1B0GTR4 108 aa5.17□□□□□ -1.58
DDX56-202ENST00000415758 A0A1B0GU33 70 aa5.15□□□□□ -1.59
DDX56-202ENST00000415758 ATP5EP56381 51 aaPredicted RBP5.15□□□□□ -1.59
DDX56-202ENST00000415758 KRTAP4-7Q9BYR0 210 aa5.13□□□□□ -1.59
DDX56-202ENST00000415758 KRTAP5-5Q701N2 237 aaPredicted RBP5.12□□□□□ -1.59
DDX56-202ENST00000415758 TNP1P09430 55 aa5.1□□□□□ -1.59
DDX56-202ENST00000415758 TMEM258P61165 79 aa5.08□□□□□ -1.6
DDX56-202ENST00000415758 KRTAP12-4P60329 112 aa5.06□□□□□ -1.6
DDX56-202ENST00000415758 SMIM26A0A096LP01 95 aa5.01□□□□□ -1.61
DDX56-202ENST00000415758 KRTAP12-3P60328 96 aa5.01□□□□□ -1.61
DDX56-202ENST00000415758 SYNE1Q8NF91 8797 aaKnown RBP4.97□□□□□ -1.61
DDX56-202ENST00000415758 A0A1B0GU69 56 aa4.97□□□□□ -1.61
DDX56-202ENST00000415758 A8MU10 97 aa4.95□□□□□ -1.62
DDX56-202ENST00000415758 PRR15LQ9BU68 103 aa4.93□□□□□ -1.62
DDX56-202ENST00000415758 PCP4P48539 62 aa4.89□□□□□ -1.63
DDX56-202ENST00000415758 LOC100996750A0A140TA64 210 aa4.88□□□□□ -1.63
DDX56-202ENST00000415758 KRTAP4-11Q9BYQ6 195 aa4.86□□□□□ -1.63
DDX56-202ENST00000415758 LINC01558Q9Y6Z2 57 aa4.86□□□□□ -1.63
DDX56-202ENST00000415758 V9GYY9 64 aa4.8□□□□□ -1.64
DDX56-202ENST00000415758 KRTAP19-4Q3LI73 84 aa4.77□□□□□ -1.65
DDX56-202ENST00000415758 KRTAP5-2Q701N4 177 aa4.77□□□□□ -1.65
DDX56-202ENST00000415758 H3BS24 57 aa4.76□□□□□ -1.65
DDX56-202ENST00000415758 UQCR11O14957 56 aa4.74□□□□□ -1.65
DDX56-202ENST00000415758 Q1T7F1 81 aa4.72□□□□□ -1.65
DDX56-202ENST00000415758 AHNAKQ09666 5890 aaKnown RBP4.71□□□□□ -1.65
DDX56-202ENST00000415758 KRTAP5-8O75690 187 aa4.71□□□□□ -1.66
DDX56-202ENST00000415758 MUC5ACP98088 5654 aa4.71□□□□□ -1.66
DDX56-202ENST00000415758 RPS28P62857 69 aaKnown RBP4.7□□□□□ -1.66
DDX56-202ENST00000415758 PSPHP1O15172 72 aa4.68□□□□□ -1.66
DDX56-202ENST00000415758 MUC5BQ9HC84 5762 aaPredicted RBP4.67□□□□□ -1.66
DDX56-202ENST00000415758 OBSCNQ5VST9 7968 aa4.64□□□□□ -1.67
DDX56-202ENST00000415758 MIR22HGQ0VDD5 57 aa4.64□□□□□ -1.67
DDX56-202ENST00000415758 MT1AP04731 61 aa4.62□□□□□ -1.67
DDX56-202ENST00000415758 KRTAP25-1Q3LHN0 102 aa4.62□□□□□ -1.67
DDX56-202ENST00000415758 KRTAP6-1Q3LI64 71 aa4.61□□□□□ -1.67
DDX56-202ENST00000415758 K7ERS5 55 aa4.58□□□□□ -1.68
DDX56-202ENST00000415758 LCE3CQ5T5A8 94 aa4.58□□□□□ -1.68
DDX56-202ENST00000415758 A6NED7 52 aa4.57□□□□□ -1.68
DDX56-202ENST00000415758 KRTAP15-1Q3LI76 137 aa4.55□□□□□ -1.68
DDX56-202ENST00000415758 KRTAP9-9Q9BYP9 154 aa4.52□□□□□ -1.69
DDX56-202ENST00000415758 KRTAP9-4Q9BYQ2 154 aa4.52□□□□□ -1.69
DDX56-202ENST00000415758 KRTAP6-2Q3LI66 62 aa4.48□□□□□ -1.69
DDX56-202ENST00000415758 KRTAP23-1A1A580 65 aa4.46□□□□□ -1.7
DDX56-202ENST00000415758 CDC42SE1Q9NRR8 79 aa4.39□□□□□ -1.71
DDX56-202ENST00000415758 A0A0A0MQY5 61 aa4.36□□□□□ -1.71
DDX56-202ENST00000415758 KRTAP5-1Q6L8H4 278 aa4.35□□□□□ -1.71
DDX56-202ENST00000415758 KRTAP9-6A8MVA2 160 aa4.34□□□□□ -1.71
DDX56-202ENST00000415758 MT3P25713 68 aa4.25□□□□□ -1.73
DDX56-202ENST00000415758 ROMO1P60602 79 aa4.25□□□□□ -1.73
DDX56-202ENST00000415758 BRK1Q8WUW1 75 aa4.2□□□□□ -1.74
DDX56-202ENST00000415758 LCE1EQ5T753 118 aa4.04□□□□□ -1.76
DDX56-202ENST00000415758 PMAIP1Q13794 54 aa3.97□□□□□ -1.77
DDX56-202ENST00000415758 PRO0628Q9UI54 55 aa3.87□□□□□ -1.79
DDX56-202ENST00000415758 KRTAP4-2Q9BYR5 136 aa3.82□□□□□ -1.8
DDX56-202ENST00000415758 LCE1BQ5T7P3 118 aa3.76□□□□□ -1.81
DDX56-202ENST00000415758 LCE1CQ5T751 118 aa3.74□□□□□ -1.81
DDX56-202ENST00000415758 KRTAP4-12Q9BQ66 201 aa3.74□□□□□ -1.81
DDX56-202ENST00000415758 PRAC1Q96KF2 57 aa3.71□□□□□ -1.82
DDX56-202ENST00000415758 KTN1-AS1Q86SY8 53 aa3.65□□□□□ -1.83
DDX56-202ENST00000415758 KRTAP5-11Q6L8G4 156 aa3.45□□□□□ -1.86
DDX56-202ENST00000415758 LCE1FQ5T754 118 aa3.44□□□□□ -1.86
DDX56-202ENST00000415758 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.37□□□□□ -1.87
DDX56-202ENST00000415758 PHGR1C9JFL3 82 aa3.24□□□□□ -1.89
DDX56-202ENST00000415758 LCE3DQ9BYE3 92 aa3.22□□□□□ -1.89
DDX56-202ENST00000415758 LUZP6Q538Z0 58 aa3.2□□□□□ -1.9
DDX56-202ENST00000415758 NDUFAF8A1L188 74 aa3.19□□□□□ -1.9
DDX56-202ENST00000415758 KRTAP21-2Q3LI59 83 aa3.07□□□□□ -1.92
DDX56-202ENST00000415758 LCE3EQ5T5B0 92 aa2.96□□□□□ -1.94
DDX56-202ENST00000415758 MUC19Q7Z5P9 8384 aa2.86□□□□□ -1.95
DDX56-202ENST00000415758 KRTAP4-4Q9BYR3 166 aa2.82□□□□□ -1.96
DDX56-202ENST00000415758 KRTAP21-1Q3LI58 79 aa2.48□□□□□ -2.01
DDX56-202ENST00000415758 INE1O15225 51 aa2.31□□□□□ -2.04
DDX56-202ENST00000415758 PRM1P04553 51 aa2.17□□□□□ -2.06
DDX56-202ENST00000415758 MUC16Q8WXI7 14507 aa1.98□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 11.7 ms