RNA–Protein interactions for RNA: ENST00000415495.5

CEACAM3-203, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

TSL 1 (best)

Gene CEACAM3, Length 1,640 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-203ENST00000415495 KRTAP6-3Q3LI67 103 aa7.63□□□□□ -1.19
CEACAM3-203ENST00000415495 KRTAP19-3Q7Z4W3 81 aa7.52□□□□□ -1.2
CEACAM3-203ENST00000415495 KRTAP19-4Q3LI73 84 aa7.49□□□□□ -1.21
CEACAM3-203ENST00000415495 LCE3CQ5T5A8 94 aa7.46□□□□□ -1.21
CEACAM3-203ENST00000415495 MT1GP13640 62 aa7.45□□□□□ -1.22
CEACAM3-203ENST00000415495 MDN1Q9NU22 5596 aa7.44□□□□□ -1.22
CEACAM3-203ENST00000415495 LCE1AQ5T7P2 110 aa7.44□□□□□ -1.22
CEACAM3-203ENST00000415495 LCE5AQ5TCM9 118 aa7.43□□□□□ -1.22
CEACAM3-203ENST00000415495 KRTAP9-7A8MTY7 169 aa7.42□□□□□ -1.22
CEACAM3-203ENST00000415495 KRTAP4-7Q9BYR0 210 aa7.4□□□□□ -1.22
CEACAM3-203ENST00000415495 SPRR5A0A1B0GTR4 108 aa7.37□□□□□ -1.23
CEACAM3-203ENST00000415495 MT1MQ8N339 61 aa7.37□□□□□ -1.23
CEACAM3-203ENST00000415495 SPRR2EP22531 72 aa7.35□□□□□ -1.23
CEACAM3-203ENST00000415495 SPRR2BP35325 72 aa7.35□□□□□ -1.23
CEACAM3-203ENST00000415495 SPRR2AP35326 72 aa7.35□□□□□ -1.23
CEACAM3-203ENST00000415495 KRTAP4-3Q9BYR4 195 aa7.23□□□□□ -1.25
CEACAM3-203ENST00000415495 NEBP20929 6669 aa7.19□□□□□ -1.26
CEACAM3-203ENST00000415495 KRTAP9-6A8MVA2 160 aa7.1□□□□□ -1.27
CEACAM3-203ENST00000415495 SPRR2DP22532 72 aa7.08□□□□□ -1.28
CEACAM3-203ENST00000415495 DSTQ03001 7570 aaKnown RBP7.02□□□□□ -1.29
CEACAM3-203ENST00000415495 LOC100996750A0A140TA64 210 aa6.94□□□□□ -1.3
CEACAM3-203ENST00000415495 LUZP6Q538Z0 58 aa6.94□□□□□ -1.3
CEACAM3-203ENST00000415495 A0A0A0MQY5 61 aa6.83□□□□□ -1.32
CEACAM3-203ENST00000415495 LCE3BQ5TA77 95 aa6.82□□□□□ -1.32
CEACAM3-203ENST00000415495 NDUFAF8A1L188 74 aa6.72□□□□□ -1.33
CEACAM3-203ENST00000415495 KRTAP2-3P0C7H8 128 aa6.68□□□□□ -1.34
CEACAM3-203ENST00000415495 KRTAP5-5Q701N2 237 aaPredicted RBP6.68□□□□□ -1.34
CEACAM3-203ENST00000415495 KRTAP2-4Q9BYR9 128 aa6.68□□□□□ -1.34
CEACAM3-203ENST00000415495 KRTAP20-1Q3LI63 56 aa6.57□□□□□ -1.36
CEACAM3-203ENST00000415495 KRTAP2-2Q9BYT5 123 aa6.54□□□□□ -1.36
CEACAM3-203ENST00000415495 KRTAP2-1Q9BYU5 128 aa6.54□□□□□ -1.36
CEACAM3-203ENST00000415495 MT1AP04731 61 aa6.5□□□□□ -1.37
CEACAM3-203ENST00000415495 KRTAP6-1Q3LI64 71 aa6.44□□□□□ -1.38
CEACAM3-203ENST00000415495 KRTAP5-4Q6L8H1 288 aa6.44□□□□□ -1.38
CEACAM3-203ENST00000415495 LCE4AQ5TA78 99 aa6.3□□□□□ -1.4
CEACAM3-203ENST00000415495 SYNE1Q8NF91 8797 aaKnown RBP6.3□□□□□ -1.4
CEACAM3-203ENST00000415495 KRTAP9-4Q9BYQ2 154 aa6.19□□□□□ -1.42
CEACAM3-203ENST00000415495 KRTAP12-4P60329 112 aa6.17□□□□□ -1.42
CEACAM3-203ENST00000415495 MT4P47944 62 aa6.15□□□□□ -1.42
CEACAM3-203ENST00000415495 KRTAP4-6Q9BYQ5 205 aa6.14□□□□□ -1.43
CEACAM3-203ENST00000415495 KRTAP4-9Q9BYQ8 210 aa6.14□□□□□ -1.43
CEACAM3-203ENST00000415495 LCE1DQ5T752 114 aa6.09□□□□□ -1.43
CEACAM3-203ENST00000415495 KRTAP20-2Q3LI61 65 aa6□□□□□ -1.45
CEACAM3-203ENST00000415495 HMCN1Q96RW7 5635 aa6□□□□□ -1.45
CEACAM3-203ENST00000415495 KRTAP6-2Q3LI66 62 aa5.95□□□□□ -1.46
CEACAM3-203ENST00000415495 MT3P25713 68 aa5.88□□□□□ -1.47
CEACAM3-203ENST00000415495 KRTAP5-2Q701N4 177 aa5.82□□□□□ -1.48
CEACAM3-203ENST00000415495 KRTAP5-3Q6L8H2 238 aa5.81□□□□□ -1.48
CEACAM3-203ENST00000415495 INE1O15225 51 aa5.6□□□□□ -1.51
CEACAM3-203ENST00000415495 LCE3DQ9BYE3 92 aa5.57□□□□□ -1.52
CEACAM3-203ENST00000415495 OBSCNQ5VST9 7968 aa5.44□□□□□ -1.54
CEACAM3-203ENST00000415495 AHNAK2Q8IVF2 5795 aa5.43□□□□□ -1.54
CEACAM3-203ENST00000415495 LCE3EQ5T5B0 92 aa5.41□□□□□ -1.54
CEACAM3-203ENST00000415495 KRTAP4-11Q9BYQ6 195 aa5.23□□□□□ -1.57
CEACAM3-203ENST00000415495 LCE1EQ5T753 118 aa5.15□□□□□ -1.58
CEACAM3-203ENST00000415495 KRTAP5-10Q6L8G5 202 aa5.13□□□□□ -1.59
CEACAM3-203ENST00000415495 KRTAP5-8O75690 187 aa5.05□□□□□ -1.6
CEACAM3-203ENST00000415495 KRTAP5-1Q6L8H4 278 aa5.05□□□□□ -1.6
CEACAM3-203ENST00000415495 GPR98Q8WXG9 6306 aa5.01□□□□□ -1.61
CEACAM3-203ENST00000415495 KRTAP5-7Q6L8G8 165 aa4.88□□□□□ -1.63
CEACAM3-203ENST00000415495 MUC5ACP98088 5654 aa4.85□□□□□ -1.63
CEACAM3-203ENST00000415495 KRTAP4-2Q9BYR5 136 aa4.83□□□□□ -1.64
CEACAM3-203ENST00000415495 LCE1BQ5T7P3 118 aa4.8□□□□□ -1.64
CEACAM3-203ENST00000415495 LCE1CQ5T751 118 aa4.79□□□□□ -1.64
CEACAM3-203ENST00000415495 PRM1P04553 51 aa4.64□□□□□ -1.67
CEACAM3-203ENST00000415495 KRTAP9-9Q9BYP9 154 aa4.54□□□□□ -1.68
CEACAM3-203ENST00000415495 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.49□□□□□ -1.69
CEACAM3-203ENST00000415495 MUC5BQ9HC84 5762 aaPredicted RBP4.34□□□□□ -1.72
CEACAM3-203ENST00000415495 KRTAP21-2Q3LI59 83 aa4.24□□□□□ -1.73
CEACAM3-203ENST00000415495 KRTAP5-11Q6L8G4 156 aa4.24□□□□□ -1.73
CEACAM3-203ENST00000415495 AHNAKQ09666 5890 aaKnown RBP4.17□□□□□ -1.74
CEACAM3-203ENST00000415495 KRTAP4-12Q9BQ66 201 aa4.03□□□□□ -1.77
CEACAM3-203ENST00000415495 LCE1FQ5T754 118 aa3.85□□□□□ -1.79
CEACAM3-203ENST00000415495 KRTAP4-4Q9BYR3 166 aa3.75□□□□□ -1.81
CEACAM3-203ENST00000415495 PHGR1C9JFL3 82 aa3.65□□□□□ -1.83
CEACAM3-203ENST00000415495 MUC19Q7Z5P9 8384 aa3.22□□□□□ -1.89
CEACAM3-203ENST00000415495 KRTAP21-1Q3LI58 79 aa2.84□□□□□ -1.95
CEACAM3-203ENST00000415495 MUC16Q8WXI7 14507 aa2.35□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 73 ms