RNA–Protein interactions for RNA: ENST00000415489.1

PNPT1-203, Transcript of polyribonucleotide nucleotidyltransferase 1, humanhuman

TSL 3

Gene PNPT1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNPT1-203ENST00000415489 SPRR2DP22532 72 aa0.63□□□□□ -2.31
PNPT1-203ENST00000415489 APOBP04114 4563 aaKnown RBP0.63□□□□□ -2.31
PNPT1-203ENST00000415489 IGSF10Q6WRI0 2623 aa0.63□□□□□ -2.31
PNPT1-203ENST00000415489 HECTD4Q9Y4D8 3996 aa0.63□□□□□ -2.31
PNPT1-203ENST00000415489 DNAH14Q0VDD8 3507 aa0.62□□□□□ -2.31
PNPT1-203ENST00000415489 EYSQ5T1H1 3165 aa0.62□□□□□ -2.31
PNPT1-203ENST00000415489 SPRR2GQ9BYE4 73 aa0.6□□□□□ -2.31
PNPT1-203ENST00000415489 MAST4O15021 2626 aa0.6□□□□□ -2.31
PNPT1-203ENST00000415489 PLECQ15149 4684 aaKnown RBP0.59□□□□□ -2.31
PNPT1-203ENST00000415489 VPS13CQ709C8 3753 aa0.59□□□□□ -2.31
PNPT1-203ENST00000415489 CDH23Q9H251 3354 aa0.59□□□□□ -2.31
PNPT1-203ENST00000415489 LPAP08519 4548 aa0.59□□□□□ -2.31
PNPT1-203ENST00000415489 LRP1Q07954 4544 aaKnown RBP0.59□□□□□ -2.32
PNPT1-203ENST00000415489 PKHD1P08F94 4074 aa0.58□□□□□ -2.32
PNPT1-203ENST00000415489 DNAH5Q8TE73 4624 aa0.58□□□□□ -2.32
PNPT1-203ENST00000415489 MT1EP04732 61 aa0.58□□□□□ -2.32
PNPT1-203ENST00000415489 SPRR2FQ96RM1 72 aa0.58□□□□□ -2.32
PNPT1-203ENST00000415489 AHNAK2Q8IVF2 5795 aa0.57□□□□□ -2.32
PNPT1-203ENST00000415489 SPRR2EP22531 72 aa0.56□□□□□ -2.32
PNPT1-203ENST00000415489 DYNC1H1Q14204 4646 aaKnown RBP0.56□□□□□ -2.32
PNPT1-203ENST00000415489 MT1LQ93083 61 aa0.55□□□□□ -2.32
PNPT1-203ENST00000415489 MT1HP80294 61 aa0.54□□□□□ -2.32
PNPT1-203ENST00000415489 STARD9Q9P2P6 4700 aa0.53□□□□□ -2.32
PNPT1-203ENST00000415489 KRTAP21-1Q3LI58 79 aa0.53□□□□□ -2.32
PNPT1-203ENST00000415489 KRTAP6-2Q3LI66 62 aa0.53□□□□□ -2.32
PNPT1-203ENST00000415489 MUC17Q685J3 4493 aa0.53□□□□□ -2.32
PNPT1-203ENST00000415489 FAT1Q14517 4588 aa0.52□□□□□ -2.33
PNPT1-203ENST00000415489 KRTAP19-8Q3LI54 63 aa0.51□□□□□ -2.33
PNPT1-203ENST00000415489 SYNE1Q8NF91 8797 aaKnown RBP0.49□□□□□ -2.33
PNPT1-203ENST00000415489 MT1XP80297 61 aa0.47□□□□□ -2.33
PNPT1-203ENST00000415489 LRP1BQ9NZR2 4599 aa0.47□□□□□ -2.33
PNPT1-203ENST00000415489 LRP2P98164 4655 aa0.45□□□□□ -2.34
PNPT1-203ENST00000415489 HERC1Q15751 4861 aa0.45□□□□□ -2.34
PNPT1-203ENST00000415489 PHGR1C9JFL3 82 aa0.43□□□□□ -2.34
PNPT1-203ENST00000415489 KRTAP19-2Q3LHN2 52 aa0.43□□□□□ -2.34
PNPT1-203ENST00000415489 KRTAP19-7Q3SYF9 63 aa0.42□□□□□ -2.34
PNPT1-203ENST00000415489 MUC5BQ9HC84 5762 aaPredicted RBP0.41□□□□□ -2.34
PNPT1-203ENST00000415489 MT2AP02795 61 aa0.41□□□□□ -2.34
PNPT1-203ENST00000415489 MT1GP13640 62 aa0.41□□□□□ -2.34
PNPT1-203ENST00000415489 MT1MQ8N339 61 aa0.41□□□□□ -2.34
PNPT1-203ENST00000415489 HMCN2Q8NDA2 5059 aa0.4□□□□□ -2.35
PNPT1-203ENST00000415489 MT1BP07438 61 aa0.39□□□□□ -2.35
PNPT1-203ENST00000415489 GPR98Q8WXG9 6306 aa0.39□□□□□ -2.35
PNPT1-203ENST00000415489 AHNAKQ09666 5890 aaKnown RBP0.39□□□□□ -2.35
PNPT1-203ENST00000415489 MT1HL1P0DM35 61 aa0.38□□□□□ -2.35
PNPT1-203ENST00000415489 DNHD1Q96M86 4753 aa0.36□□□□□ -2.35
PNPT1-203ENST00000415489 MT1FP04733 61 aa0.36□□□□□ -2.35
PNPT1-203ENST00000415489 MUC2Q02817 5179 aa0.36□□□□□ -2.35
PNPT1-203ENST00000415489 KMT2CQ8NEZ4 4911 aaKnown RBP0.34□□□□□ -2.35
PNPT1-203ENST00000415489 KRTAP6-1Q3LI64 71 aa0.33□□□□□ -2.36
PNPT1-203ENST00000415489 HERC2O95714 4834 aa0.33□□□□□ -2.36
PNPT1-203ENST00000415489 MACF1Q9UPN3 7388 aaKnown RBP0.32□□□□□ -2.36
PNPT1-203ENST00000415489 MDN1Q9NU22 5596 aa0.32□□□□□ -2.36
PNPT1-203ENST00000415489 RYR3Q15413 4870 aa0.32□□□□□ -2.36
PNPT1-203ENST00000415489 BIRC6Q9NR09 4857 aa0.31□□□□□ -2.36
PNPT1-203ENST00000415489 FAT4Q6V0I7 4981 aa0.31□□□□□ -2.36
PNPT1-203ENST00000415489 USH2AO75445 5202 aa0.31□□□□□ -2.36
PNPT1-203ENST00000415489 SSPOA2VEC9 5147 aa0.3□□□□□ -2.36
PNPT1-203ENST00000415489 HYDINQ4G0P3 5121 aa0.29□□□□□ -2.36
PNPT1-203ENST00000415489 MUC5ACP98088 5654 aa0.29□□□□□ -2.36
PNPT1-203ENST00000415489 PCLOQ9Y6V0 5065 aa0.28□□□□□ -2.36
PNPT1-203ENST00000415489 RYR1P21817 5038 aa0.28□□□□□ -2.37
PNPT1-203ENST00000415489 KMT2DO14686 5537 aa0.27□□□□□ -2.37
PNPT1-203ENST00000415489 UBR4Q5T4S7 5183 aa0.27□□□□□ -2.37
PNPT1-203ENST00000415489 SYNE2Q8WXH0 6885 aaKnown RBP0.26□□□□□ -2.37
PNPT1-203ENST00000415489 FSIP2Q5CZC0 6907 aa0.24□□□□□ -2.37
PNPT1-203ENST00000415489 RNF213Q63HN8 5207 aa0.24□□□□□ -2.37
PNPT1-203ENST00000415489 EPPK1P58107 5090 aaKnown RBP0.18□□□□□ -2.38
PNPT1-203ENST00000415489 RYR2Q92736 4967 aa0.18□□□□□ -2.38
PNPT1-203ENST00000415489 ABCA13Q86UQ4 5058 aa0.17□□□□□ -2.38
PNPT1-203ENST00000415489 KIAA1109Q2LD37 5005 aa0.17□□□□□ -2.38
PNPT1-203ENST00000415489 KRTAP19-6Q3LI70 58 aa0.15□□□□□ -2.39
PNPT1-203ENST00000415489 DSTQ03001 7570 aaKnown RBP0.15□□□□□ -2.39
PNPT1-203ENST00000415489 MUC12Q9UKN1 5478 aa0.14□□□□□ -2.39
PNPT1-203ENST00000415489 MT4P47944 62 aa0.14□□□□□ -2.39
PNPT1-203ENST00000415489 KRTAP20-2Q3LI61 65 aa0.08□□□□□ -2.4
PNPT1-203ENST00000415489 KRTAP20-1Q3LI63 56 aa0.05□□□□□ -2.4
PNPT1-203ENST00000415489 NEBP20929 6669 aa-0.05□□□□□ -2.42
Retrieved 78 of 20,778 RNA–protein pairs in 46.6 ms