RNA–Protein interactions for RNA: ENST00000415138.1

LINC01888-201, Transcript of long intergenic non-protein coding RNA 1888, humanhuman

TSL 2

Gene LINC01888, Length 436 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01888-201ENST00000415138 KRTAP10-10P60014 251 aa4.44□□□□□ -1.7
LINC01888-201ENST00000415138 KRTAP10-5P60370 271 aa4.4□□□□□ -1.71
LINC01888-201ENST00000415138 MT2AP02795 61 aa4.39□□□□□ -1.71
LINC01888-201ENST00000415138 MT1FP04733 61 aa4.35□□□□□ -1.71
LINC01888-201ENST00000415138 KRTAP10-12P60413 245 aa4.25□□□□□ -1.73
LINC01888-201ENST00000415138 KRTAP5-1Q6L8H4 278 aa4.22□□□□□ -1.73
LINC01888-201ENST00000415138 KRTAP9-6A8MVA2 160 aa4.2□□□□□ -1.74
LINC01888-201ENST00000415138 LCE1FQ5T754 118 aa4.2□□□□□ -1.74
LINC01888-201ENST00000415138 SPRR2GQ9BYE4 73 aa4.16□□□□□ -1.74
LINC01888-201ENST00000415138 KRTAP19-8Q3LI54 63 aa4.09□□□□□ -1.75
LINC01888-201ENST00000415138 SSPOA2VEC9 5147 aa4.08□□□□□ -1.76
LINC01888-201ENST00000415138 FCGBPQ9Y6R7 5405 aaPredicted RBP4.04□□□□□ -1.76
LINC01888-201ENST00000415138 KRTAP19-6Q3LI70 58 aa4.04□□□□□ -1.76
LINC01888-201ENST00000415138 KRTAP5-4Q6L8H1 288 aa4.04□□□□□ -1.76
LINC01888-201ENST00000415138 SYNE2Q8WXH0 6885 aaKnown RBP4.04□□□□□ -1.76
LINC01888-201ENST00000415138 MT1BP07438 61 aa4.03□□□□□ -1.76
LINC01888-201ENST00000415138 KRTAP4-4Q9BYR3 166 aa4.03□□□□□ -1.76
LINC01888-201ENST00000415138 USH2AO75445 5202 aa4.02□□□□□ -1.77
LINC01888-201ENST00000415138 TNP1P09430 55 aa3.99□□□□□ -1.77
LINC01888-201ENST00000415138 LCE3CQ5T5A8 94 aa3.99□□□□□ -1.77
LINC01888-201ENST00000415138 KRTAP5-9P26371 169 aa3.97□□□□□ -1.77
LINC01888-201ENST00000415138 MACF1Q9UPN3 7388 aaKnown RBP3.95□□□□□ -1.78
LINC01888-201ENST00000415138 MT1XP80297 61 aa3.84□□□□□ -1.79
LINC01888-201ENST00000415138 KRTAP6-3Q3LI67 103 aa3.84□□□□□ -1.79
LINC01888-201ENST00000415138 KRTAP20-1Q3LI63 56 aa3.83□□□□□ -1.8
LINC01888-201ENST00000415138 NEBP20929 6669 aa3.83□□□□□ -1.8
LINC01888-201ENST00000415138 MUC12Q9UKN1 5478 aa3.74□□□□□ -1.81
LINC01888-201ENST00000415138 OBSCNQ5VST9 7968 aa3.7□□□□□ -1.82
LINC01888-201ENST00000415138 KRTAP8-1Q8IUC2 63 aa3.69□□□□□ -1.82
LINC01888-201ENST00000415138 LCE3EQ5T5B0 92 aa3.63□□□□□ -1.83
LINC01888-201ENST00000415138 KMT2DO14686 5537 aa3.63□□□□□ -1.83
LINC01888-201ENST00000415138 KRTAP4-3Q9BYR4 195 aa3.62□□□□□ -1.83
LINC01888-201ENST00000415138 SPRR2FQ96RM1 72 aa3.61□□□□□ -1.83
LINC01888-201ENST00000415138 LCE3AQ5TA76 89 aa3.6□□□□□ -1.83
LINC01888-201ENST00000415138 KRTAP2-3P0C7H8 128 aa3.57□□□□□ -1.84
LINC01888-201ENST00000415138 KRTAP2-4Q9BYR9 128 aa3.57□□□□□ -1.84
LINC01888-201ENST00000415138 SPRR2EP22531 72 aa3.51□□□□□ -1.85
LINC01888-201ENST00000415138 SPRR2BP35325 72 aa3.51□□□□□ -1.85
LINC01888-201ENST00000415138 SPRR2AP35326 72 aa3.51□□□□□ -1.85
LINC01888-201ENST00000415138 GPR98Q8WXG9 6306 aa3.49□□□□□ -1.85
LINC01888-201ENST00000415138 MDN1Q9NU22 5596 aa3.49□□□□□ -1.85
LINC01888-201ENST00000415138 KRTAP19-5Q3LI72 72 aa3.44□□□□□ -1.86
LINC01888-201ENST00000415138 KRTAP19-7Q3SYF9 63 aa3.42□□□□□ -1.86
LINC01888-201ENST00000415138 KRTAP2-1Q9BYU5 128 aa3.42□□□□□ -1.86
LINC01888-201ENST00000415138 MT1EP04732 61 aa3.4□□□□□ -1.87
LINC01888-201ENST00000415138 SPRR2DP22532 72 aa3.4□□□□□ -1.87
LINC01888-201ENST00000415138 KRTAP12-3P60328 96 aa3.37□□□□□ -1.87
LINC01888-201ENST00000415138 KRTAP5-2Q701N4 177 aa3.36□□□□□ -1.87
LINC01888-201ENST00000415138 KRTAP19-3Q7Z4W3 81 aa3.36□□□□□ -1.87
LINC01888-201ENST00000415138 MT1GP13640 62 aa3.33□□□□□ -1.88
LINC01888-201ENST00000415138 MT1LQ93083 61 aa3.29□□□□□ -1.88
LINC01888-201ENST00000415138 KRTAP5-5Q701N2 237 aaPredicted RBP3.26□□□□□ -1.89
LINC01888-201ENST00000415138 MT1MQ8N339 61 aa3.23□□□□□ -1.89
LINC01888-201ENST00000415138 KRTAP12-4P60329 112 aa3.13□□□□□ -1.91
LINC01888-201ENST00000415138 LCE1CQ5T751 118 aa3.13□□□□□ -1.91
LINC01888-201ENST00000415138 LCE1BQ5T7P3 118 aa3.13□□□□□ -1.91
LINC01888-201ENST00000415138 DSTQ03001 7570 aaKnown RBP3.11□□□□□ -1.91
LINC01888-201ENST00000415138 KRTAP5-10Q6L8G5 202 aa3.04□□□□□ -1.92
LINC01888-201ENST00000415138 AHNAK2Q8IVF2 5795 aa3.02□□□□□ -1.93
LINC01888-201ENST00000415138 KRTAP5-7Q6L8G8 165 aa2.98□□□□□ -1.93
LINC01888-201ENST00000415138 HMCN1Q96RW7 5635 aa2.96□□□□□ -1.93
LINC01888-201ENST00000415138 MT4P47944 62 aa2.95□□□□□ -1.94
LINC01888-201ENST00000415138 LCE3DQ9BYE3 92 aa2.87□□□□□ -1.95
LINC01888-201ENST00000415138 KRTAP5-8O75690 187 aa2.83□□□□□ -1.96
LINC01888-201ENST00000415138 MT1AP04731 61 aa2.82□□□□□ -1.96
LINC01888-201ENST00000415138 PRM1P04553 51 aa2.8□□□□□ -1.96
LINC01888-201ENST00000415138 KRTAP20-2Q3LI61 65 aa2.77□□□□□ -1.97
LINC01888-201ENST00000415138 KRTAP6-1Q3LI64 71 aa2.77□□□□□ -1.97
LINC01888-201ENST00000415138 SYNE1Q8NF91 8797 aaKnown RBP2.66□□□□□ -1.98
LINC01888-201ENST00000415138 AHNAKQ09666 5890 aaKnown RBP2.66□□□□□ -1.98
LINC01888-201ENST00000415138 KRTAP6-2Q3LI66 62 aa2.62□□□□□ -1.99
LINC01888-201ENST00000415138 MUC19Q7Z5P9 8384 aa2.59□□□□□ -2
LINC01888-201ENST00000415138 MUC5ACP98088 5654 aa2.55□□□□□ -2
LINC01888-201ENST00000415138 MUC5BQ9HC84 5762 aaPredicted RBP2.54□□□□□ -2
LINC01888-201ENST00000415138 KRTAP21-2Q3LI59 83 aa2.23□□□□□ -2.05
LINC01888-201ENST00000415138 KRTAP21-1Q3LI58 79 aa1.96□□□□□ -2.1
LINC01888-201ENST00000415138 PHGR1C9JFL3 82 aa1.79□□□□□ -2.12
LINC01888-201ENST00000415138 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 57.5 ms