RNA–Protein interactions for RNA: ENST00000415051.5

UBE2D4-202, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-202ENST00000415051 CHKB-CPT1BH3BT56 60 aa5.68□□□□□ -1.5
UBE2D4-202ENST00000415051 LCE3AQ5TA76 89 aa5.68□□□□□ -1.5
UBE2D4-202ENST00000415051 AHNAKQ09666 5890 aaKnown RBP5.66□□□□□ -1.5
UBE2D4-202ENST00000415051 KRTAP12-4P60329 112 aa5.66□□□□□ -1.5
UBE2D4-202ENST00000415051 ATP5EP56381 51 aaPredicted RBP5.62□□□□□ -1.51
UBE2D4-202ENST00000415051 MUC5ACP98088 5654 aa5.61□□□□□ -1.51
UBE2D4-202ENST00000415051 COA5Q86WW8 74 aa5.61□□□□□ -1.51
UBE2D4-202ENST00000415051 TMEM258P61165 79 aa5.6□□□□□ -1.51
UBE2D4-202ENST00000415051 SPINT4Q6UDR6 99 aa5.6□□□□□ -1.51
UBE2D4-202ENST00000415051 MUC5BQ9HC84 5762 aaPredicted RBP5.59□□□□□ -1.51
UBE2D4-202ENST00000415051 KRTAP12-1P59990 96 aa5.57□□□□□ -1.52
UBE2D4-202ENST00000415051 KRTAP4-11Q9BYQ6 195 aa5.57□□□□□ -1.52
UBE2D4-202ENST00000415051 PCP4P48539 62 aa5.56□□□□□ -1.52
UBE2D4-202ENST00000415051 SPATA8Q6RVD6 105 aa5.55□□□□□ -1.52
UBE2D4-202ENST00000415051 LOC100996750A0A140TA64 210 aa5.5□□□□□ -1.53
UBE2D4-202ENST00000415051 KRTAP5-8O75690 187 aa5.44□□□□□ -1.54
UBE2D4-202ENST00000415051 KRTAP12-3P60328 96 aa5.42□□□□□ -1.54
UBE2D4-202ENST00000415051 SERP1Q9Y6X1 66 aa5.42□□□□□ -1.54
UBE2D4-202ENST00000415051 TNP1P09430 55 aa5.41□□□□□ -1.54
UBE2D4-202ENST00000415051 KRTAP5-2Q701N4 177 aa5.41□□□□□ -1.54
UBE2D4-202ENST00000415051 SEC61GP60059 68 aa5.37□□□□□ -1.55
UBE2D4-202ENST00000415051 A0A1B0GU33 70 aa5.34□□□□□ -1.55
UBE2D4-202ENST00000415051 LINC01558Q9Y6Z2 57 aa5.32□□□□□ -1.56
UBE2D4-202ENST00000415051 A0A1B0GU69 56 aa5.31□□□□□ -1.56
UBE2D4-202ENST00000415051 RPS28P62857 69 aaKnown RBP5.3□□□□□ -1.56
UBE2D4-202ENST00000415051 OBSCNQ5VST9 7968 aa5.29□□□□□ -1.56
UBE2D4-202ENST00000415051 PRR15LQ9BU68 103 aa5.27□□□□□ -1.57
UBE2D4-202ENST00000415051 SMIM26A0A096LP01 95 aa5.24□□□□□ -1.57
UBE2D4-202ENST00000415051 V9GYY9 64 aa5.24□□□□□ -1.57
UBE2D4-202ENST00000415051 A8MU10 97 aa5.23□□□□□ -1.57
UBE2D4-202ENST00000415051 Q1T7F1 81 aa5.22□□□□□ -1.57
UBE2D4-202ENST00000415051 KRTAP9-9Q9BYP9 154 aa5.18□□□□□ -1.58
UBE2D4-202ENST00000415051 KRTAP6-1Q3LI64 71 aa5.16□□□□□ -1.58
UBE2D4-202ENST00000415051 MT1AP04731 61 aa5.12□□□□□ -1.59
UBE2D4-202ENST00000415051 UQCR11O14957 56 aa5.1□□□□□ -1.59
UBE2D4-202ENST00000415051 PSPHP1O15172 72 aa5.09□□□□□ -1.59
UBE2D4-202ENST00000415051 KRTAP19-4Q3LI73 84 aa5.08□□□□□ -1.6
UBE2D4-202ENST00000415051 KRTAP6-2Q3LI66 62 aa5.05□□□□□ -1.6
UBE2D4-202ENST00000415051 KRTAP4-12Q9BQ66 201 aa5.04□□□□□ -1.6
UBE2D4-202ENST00000415051 KRTAP9-4Q9BYQ2 154 aa5.02□□□□□ -1.61
UBE2D4-202ENST00000415051 MIR22HGQ0VDD5 57 aa5.01□□□□□ -1.61
UBE2D4-202ENST00000415051 A6NED7 52 aa4.96□□□□□ -1.62
UBE2D4-202ENST00000415051 KRTAP5-1Q6L8H4 278 aa4.96□□□□□ -1.62
UBE2D4-202ENST00000415051 LCE3CQ5T5A8 94 aa4.94□□□□□ -1.62
UBE2D4-202ENST00000415051 KRTAP25-1Q3LHN0 102 aa4.87□□□□□ -1.63
UBE2D4-202ENST00000415051 K7ERS5 55 aa4.85□□□□□ -1.63
UBE2D4-202ENST00000415051 CDC42SE1Q9NRR8 79 aa4.85□□□□□ -1.63
UBE2D4-202ENST00000415051 KRTAP15-1Q3LI76 137 aa4.84□□□□□ -1.63
UBE2D4-202ENST00000415051 KRTAP9-6A8MVA2 160 aa4.78□□□□□ -1.64
UBE2D4-202ENST00000415051 KRTAP23-1A1A580 65 aa4.74□□□□□ -1.65
UBE2D4-202ENST00000415051 MT3P25713 68 aa4.68□□□□□ -1.66
UBE2D4-202ENST00000415051 BRK1Q8WUW1 75 aa4.65□□□□□ -1.67
UBE2D4-202ENST00000415051 ROMO1P60602 79 aa4.6□□□□□ -1.67
UBE2D4-202ENST00000415051 LCE1EQ5T753 118 aa4.47□□□□□ -1.69
UBE2D4-202ENST00000415051 PRO0628Q9UI54 55 aa4.42□□□□□ -1.7
UBE2D4-202ENST00000415051 PMAIP1Q13794 54 aa4.41□□□□□ -1.7
UBE2D4-202ENST00000415051 SVIPQ8NHG7 77 aa4.4□□□□□ -1.71
UBE2D4-202ENST00000415051 KRTAP4-2Q9BYR5 136 aa4.34□□□□□ -1.71
UBE2D4-202ENST00000415051 LCE1BQ5T7P3 118 aa4.25□□□□□ -1.73
UBE2D4-202ENST00000415051 LCE1CQ5T751 118 aa4.16□□□□□ -1.74
UBE2D4-202ENST00000415051 KTN1-AS1Q86SY8 53 aa4.14□□□□□ -1.75
UBE2D4-202ENST00000415051 PRAC1Q96KF2 57 aa4.13□□□□□ -1.75
UBE2D4-202ENST00000415051 KRTAP5-11Q6L8G4 156 aa3.95□□□□□ -1.78
UBE2D4-202ENST00000415051 A0A0A0MQY5 61 aa3.93□□□□□ -1.78
UBE2D4-202ENST00000415051 LCE1FQ5T754 118 aa3.84□□□□□ -1.79
UBE2D4-202ENST00000415051 PHGR1C9JFL3 82 aa3.79□□□□□ -1.8
UBE2D4-202ENST00000415051 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.73□□□□□ -1.81
UBE2D4-202ENST00000415051 LUZP6Q538Z0 58 aa3.45□□□□□ -1.86
UBE2D4-202ENST00000415051 KRTAP21-2Q3LI59 83 aa3.43□□□□□ -1.86
UBE2D4-202ENST00000415051 LCE3DQ9BYE3 92 aa3.4□□□□□ -1.87
UBE2D4-202ENST00000415051 MUC19Q7Z5P9 8384 aa3.31□□□□□ -1.88
UBE2D4-202ENST00000415051 KRTAP4-4Q9BYR3 166 aa3.23□□□□□ -1.89
UBE2D4-202ENST00000415051 NDUFAF8A1L188 74 aa3.16□□□□□ -1.9
UBE2D4-202ENST00000415051 LCE3EQ5T5B0 92 aa3.09□□□□□ -1.91
UBE2D4-202ENST00000415051 KRTAP21-1Q3LI58 79 aa2.87□□□□□ -1.95
UBE2D4-202ENST00000415051 INE1O15225 51 aa2.62□□□□□ -1.99
UBE2D4-202ENST00000415051 PRM1P04553 51 aa2.35□□□□□ -2.03
UBE2D4-202ENST00000415051 MUC16Q8WXI7 14507 aa2.28□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 252.6 ms