RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 MUC12Q9UKN1 5478 aa5.28□□□□□ -1.56
LRCH3-202ENST00000414675 KRTAP19-4Q3LI73 84 aa5.27□□□□□ -1.57
LRCH3-202ENST00000414675 INE1O15225 51 aa5.26□□□□□ -1.57
LRCH3-202ENST00000414675 SYNE2Q8WXH0 6885 aaKnown RBP5.24□□□□□ -1.57
LRCH3-202ENST00000414675 KRTAP9-6A0A140TA67 174 aa5.23□□□□□ -1.57
LRCH3-202ENST00000414675 KRTAP19-3Q7Z4W3 81 aa5.17□□□□□ -1.58
LRCH3-202ENST00000414675 KRTAP4-3Q9BYR4 195 aa5.17□□□□□ -1.58
LRCH3-202ENST00000414675 MT1MQ8N339 61 aa5.13□□□□□ -1.59
LRCH3-202ENST00000414675 SPRR2FQ96RM1 72 aa5.13□□□□□ -1.59
LRCH3-202ENST00000414675 MT1GP13640 62 aa5.12□□□□□ -1.59
LRCH3-202ENST00000414675 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.1□□□□□ -1.59
LRCH3-202ENST00000414675 LOC100996750A0A140TA64 210 aa5.06□□□□□ -1.6
LRCH3-202ENST00000414675 KRTAP5-9P26371 169 aa5.06□□□□□ -1.6
LRCH3-202ENST00000414675 LCE5AQ5TCM9 118 aa5.04□□□□□ -1.6
LRCH3-202ENST00000414675 KRTAP2-3P0C7H8 128 aa5.02□□□□□ -1.61
LRCH3-202ENST00000414675 KRTAP2-4Q9BYR9 128 aa5.02□□□□□ -1.61
LRCH3-202ENST00000414675 KRTAP2-1Q9BYU5 128 aa5.02□□□□□ -1.61
LRCH3-202ENST00000414675 MDN1Q9NU22 5596 aa5□□□□□ -1.61
LRCH3-202ENST00000414675 KRTAP6-3Q3LI67 103 aa4.95□□□□□ -1.62
LRCH3-202ENST00000414675 DSTQ03001 7570 aaKnown RBP4.93□□□□□ -1.62
LRCH3-202ENST00000414675 LCE1AQ5T7P2 110 aa4.92□□□□□ -1.62
LRCH3-202ENST00000414675 SPRR2EP22531 72 aa4.85□□□□□ -1.63
LRCH3-202ENST00000414675 SPRR2BP35325 72 aa4.85□□□□□ -1.63
LRCH3-202ENST00000414675 SPRR2AP35326 72 aa4.85□□□□□ -1.63
LRCH3-202ENST00000414675 KRTAP9-7A8MTY7 169 aa4.81□□□□□ -1.64
LRCH3-202ENST00000414675 SPRR2DP22532 72 aa4.67□□□□□ -1.66
LRCH3-202ENST00000414675 NEBP20929 6669 aa4.65□□□□□ -1.67
LRCH3-202ENST00000414675 KRTAP6-1Q3LI64 71 aa4.6□□□□□ -1.67
LRCH3-202ENST00000414675 KRTAP5-5Q701N2 237 aaPredicted RBP4.59□□□□□ -1.67
LRCH3-202ENST00000414675 MT1AP04731 61 aa4.56□□□□□ -1.68
LRCH3-202ENST00000414675 LCE3BQ5TA77 95 aa4.56□□□□□ -1.68
LRCH3-202ENST00000414675 SYNE1Q8NF91 8797 aaKnown RBP4.46□□□□□ -1.7
LRCH3-202ENST00000414675 KRTAP12-4P60329 112 aa4.44□□□□□ -1.7
LRCH3-202ENST00000414675 KRTAP4-9Q9BYQ8 210 aa4.43□□□□□ -1.7
LRCH3-202ENST00000414675 KRTAP9-4Q9BYQ2 154 aa4.31□□□□□ -1.72
LRCH3-202ENST00000414675 KRTAP20-1Q3LI63 56 aa4.24□□□□□ -1.73
LRCH3-202ENST00000414675 KRTAP5-4Q6L8H1 288 aa4.24□□□□□ -1.73
LRCH3-202ENST00000414675 KRTAP2-2Q9BYT5 123 aa4.23□□□□□ -1.73
LRCH3-202ENST00000414675 LCE3DQ9BYE3 92 aa4.21□□□□□ -1.74
LRCH3-202ENST00000414675 KRTAP6-2Q3LI66 62 aa4.17□□□□□ -1.74
LRCH3-202ENST00000414675 LCE3EQ5T5B0 92 aa4.15□□□□□ -1.75
LRCH3-202ENST00000414675 LCE4AQ5TA78 99 aa4.11□□□□□ -1.75
LRCH3-202ENST00000414675 MT3P25713 68 aa4.09□□□□□ -1.75
LRCH3-202ENST00000414675 MT4P47944 62 aa4.09□□□□□ -1.75
LRCH3-202ENST00000414675 KRTAP4-6Q9BYQ5 205 aa4.09□□□□□ -1.76
LRCH3-202ENST00000414675 LCE1DQ5T752 114 aa4.01□□□□□ -1.77
LRCH3-202ENST00000414675 HMCN1Q96RW7 5635 aa4.01□□□□□ -1.77
LRCH3-202ENST00000414675 KRTAP20-2Q3LI61 65 aa3.97□□□□□ -1.77
LRCH3-202ENST00000414675 OBSCNQ5VST9 7968 aa3.96□□□□□ -1.78
LRCH3-202ENST00000414675 PRM1P04553 51 aa3.92□□□□□ -1.78
LRCH3-202ENST00000414675 KRTAP9-9Q9BYP9 154 aa3.92□□□□□ -1.78
LRCH3-202ENST00000414675 KRTAP5-2Q701N4 177 aa3.87□□□□□ -1.79
LRCH3-202ENST00000414675 KRTAP5-3Q6L8H2 238 aa3.83□□□□□ -1.8
LRCH3-202ENST00000414675 KRTAP4-12Q9BQ66 201 aa3.64□□□□□ -1.83
LRCH3-202ENST00000414675 AHNAK2Q8IVF2 5795 aa3.5□□□□□ -1.85
LRCH3-202ENST00000414675 MUC5ACP98088 5654 aa3.45□□□□□ -1.86
LRCH3-202ENST00000414675 LCE1EQ5T753 118 aa3.44□□□□□ -1.86
LRCH3-202ENST00000414675 KRTAP4-11Q9BYQ6 195 aa3.44□□□□□ -1.86
LRCH3-202ENST00000414675 LCE1BQ5T7P3 118 aa3.35□□□□□ -1.87
LRCH3-202ENST00000414675 KRTAP5-1Q6L8H4 278 aa3.35□□□□□ -1.87
LRCH3-202ENST00000414675 KRTAP5-8O75690 187 aa3.32□□□□□ -1.88
LRCH3-202ENST00000414675 KRTAP5-10Q6L8G5 202 aa3.32□□□□□ -1.88
LRCH3-202ENST00000414675 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
LRCH3-202ENST00000414675 KRTAP4-2Q9BYR5 136 aa3.28□□□□□ -1.88
LRCH3-202ENST00000414675 LCE1CQ5T751 118 aa3.23□□□□□ -1.89
LRCH3-202ENST00000414675 KRTAP5-7Q6L8G8 165 aa3.18□□□□□ -1.9
LRCH3-202ENST00000414675 GPR98Q8WXG9 6306 aa3.14□□□□□ -1.91
LRCH3-202ENST00000414675 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.04□□□□□ -1.92
LRCH3-202ENST00000414675 KRTAP21-2Q3LI59 83 aa2.99□□□□□ -1.93
LRCH3-202ENST00000414675 MUC5BQ9HC84 5762 aaPredicted RBP2.91□□□□□ -1.94
LRCH3-202ENST00000414675 KRTAP5-11Q6L8G4 156 aa2.82□□□□□ -1.96
LRCH3-202ENST00000414675 KRTAP4-4Q9BYR3 166 aa2.72□□□□□ -1.97
LRCH3-202ENST00000414675 AHNAKQ09666 5890 aaKnown RBP2.6□□□□□ -1.99
LRCH3-202ENST00000414675 PHGR1C9JFL3 82 aa2.44□□□□□ -2.02
LRCH3-202ENST00000414675 KRTAP21-1Q3LI58 79 aa2.43□□□□□ -2.02
LRCH3-202ENST00000414675 MUC19Q7Z5P9 8384 aa2.39□□□□□ -2.03
LRCH3-202ENST00000414675 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 237 ms