RNA–Protein interactions for RNA: ENST00000414029.1

SLC35F6-202, Transcript of solute carrier family 35 member F6, humanhuman

TSL 1 (best)

Gene SLC35F6, Length 3,605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC35F6-202ENST00000414029 USH2AO75445 5202 aa3.57□□□□□ -1.84
SLC35F6-202ENST00000414029 KRTAP4-9Q9BYQ8 210 aa3.57□□□□□ -1.84
SLC35F6-202ENST00000414029 KRTAP12-3P60328 96 aa3.57□□□□□ -1.84
SLC35F6-202ENST00000414029 KRTAP2-2Q9BYT5 123 aa3.55□□□□□ -1.84
SLC35F6-202ENST00000414029 MT3P25713 68 aa3.54□□□□□ -1.84
SLC35F6-202ENST00000414029 MT1XP80297 61 aa3.5□□□□□ -1.85
SLC35F6-202ENST00000414029 KRTAP4-7Q9BYR0 210 aa3.5□□□□□ -1.85
SLC35F6-202ENST00000414029 KRTAP10-5P60370 271 aa3.5□□□□□ -1.85
SLC35F6-202ENST00000414029 LCE3CQ5T5A8 94 aa3.5□□□□□ -1.85
SLC35F6-202ENST00000414029 KRTAP10-7P60409 375 aaPredicted RBP3.42□□□□□ -1.86
SLC35F6-202ENST00000414029 KRTAP4-2Q9BYR5 136 aa3.4□□□□□ -1.86
SLC35F6-202ENST00000414029 KMT2DO14686 5537 aa3.36□□□□□ -1.87
SLC35F6-202ENST00000414029 KRTAP2-3P0C7H8 128 aa3.34□□□□□ -1.87
SLC35F6-202ENST00000414029 KRTAP2-4Q9BYR9 128 aa3.34□□□□□ -1.87
SLC35F6-202ENST00000414029 KRTAP2-1Q9BYU5 128 aa3.34□□□□□ -1.87
SLC35F6-202ENST00000414029 KRTAP9-6A8MVA2 160 aa3.34□□□□□ -1.87
SLC35F6-202ENST00000414029 KRTAP12-4P60329 112 aa3.27□□□□□ -1.89
SLC35F6-202ENST00000414029 KRTAP19-5Q3LI72 72 aa3.25□□□□□ -1.89
SLC35F6-202ENST00000414029 SSPOA2VEC9 5147 aa3.25□□□□□ -1.89
SLC35F6-202ENST00000414029 LCE3EQ5T5B0 92 aa3.24□□□□□ -1.89
SLC35F6-202ENST00000414029 KRTAP19-6Q3LI70 58 aa3.21□□□□□ -1.9
SLC35F6-202ENST00000414029 DSTQ03001 7570 aaKnown RBP3.18□□□□□ -1.9
SLC35F6-202ENST00000414029 OBSCNQ5VST9 7968 aa3.15□□□□□ -1.9
SLC35F6-202ENST00000414029 KRTAP19-7Q3SYF9 63 aa3.11□□□□□ -1.91
SLC35F6-202ENST00000414029 KRTAP6-3Q3LI67 103 aa3.11□□□□□ -1.91
SLC35F6-202ENST00000414029 FCGBPQ9Y6R7 5405 aaPredicted RBP3.11□□□□□ -1.91
SLC35F6-202ENST00000414029 MT1EP04732 61 aa3.06□□□□□ -1.92
SLC35F6-202ENST00000414029 MUC12Q9UKN1 5478 aa3.05□□□□□ -1.92
SLC35F6-202ENST00000414029 LCE1EQ5T753 118 aa3.05□□□□□ -1.92
SLC35F6-202ENST00000414029 SYNE1Q8NF91 8797 aaKnown RBP3.04□□□□□ -1.92
SLC35F6-202ENST00000414029 CRCT1Q9UGL9 99 aa3.04□□□□□ -1.92
SLC35F6-202ENST00000414029 MT1LQ93083 61 aa3.03□□□□□ -1.92
SLC35F6-202ENST00000414029 SPRR2FQ96RM1 72 aa3.01□□□□□ -1.93
SLC35F6-202ENST00000414029 SYNE2Q8WXH0 6885 aaKnown RBP2.99□□□□□ -1.93
SLC35F6-202ENST00000414029 PRM1P04553 51 aa2.98□□□□□ -1.93
SLC35F6-202ENST00000414029 MACF1Q9UPN3 7388 aaKnown RBP2.95□□□□□ -1.94
SLC35F6-202ENST00000414029 KRTAP19-3Q7Z4W3 81 aa2.92□□□□□ -1.94
SLC35F6-202ENST00000414029 KRTAP4-3Q9BYR4 195 aa2.92□□□□□ -1.94
SLC35F6-202ENST00000414029 MT1GP13640 62 aa2.9□□□□□ -1.94
SLC35F6-202ENST00000414029 KRTAP5-3Q6L8H2 238 aa2.89□□□□□ -1.95
SLC35F6-202ENST00000414029 MT1MQ8N339 61 aa2.88□□□□□ -1.95
SLC35F6-202ENST00000414029 LCE3DQ9BYE3 92 aa2.86□□□□□ -1.95
SLC35F6-202ENST00000414029 MDN1Q9NU22 5596 aa2.82□□□□□ -1.96
SLC35F6-202ENST00000414029 MUC19Q7Z5P9 8384 aa2.81□□□□□ -1.96
SLC35F6-202ENST00000414029 SPRR2EP22531 72 aa2.8□□□□□ -1.96
SLC35F6-202ENST00000414029 SPRR2BP35325 72 aa2.8□□□□□ -1.96
SLC35F6-202ENST00000414029 SPRR2AP35326 72 aa2.8□□□□□ -1.96
SLC35F6-202ENST00000414029 KRTAP5-5Q701N2 237 aaPredicted RBP2.78□□□□□ -1.96
SLC35F6-202ENST00000414029 KRTAP5-9P26371 169 aa2.75□□□□□ -1.97
SLC35F6-202ENST00000414029 SPRR2DP22532 72 aa2.69□□□□□ -1.98
SLC35F6-202ENST00000414029 KRTAP6-2Q3LI66 62 aa2.64□□□□□ -1.99
SLC35F6-202ENST00000414029 MT1AP04731 61 aa2.6□□□□□ -1.99
SLC35F6-202ENST00000414029 KRTAP6-1Q3LI64 71 aa2.57□□□□□ -2
SLC35F6-202ENST00000414029 KRTAP5-11Q6L8G4 156 aa2.5□□□□□ -2.01
SLC35F6-202ENST00000414029 NEBP20929 6669 aa2.46□□□□□ -2.02
SLC35F6-202ENST00000414029 MT4P47944 62 aa2.4□□□□□ -2.03
SLC35F6-202ENST00000414029 KRTAP5-4Q6L8H1 288 aa2.31□□□□□ -2.04
SLC35F6-202ENST00000414029 KRTAP20-1Q3LI63 56 aa2.3□□□□□ -2.04
SLC35F6-202ENST00000414029 KRTAP20-2Q3LI61 65 aa2.23□□□□□ -2.05
SLC35F6-202ENST00000414029 HMCN1Q96RW7 5635 aa2.19□□□□□ -2.06
SLC35F6-202ENST00000414029 KRTAP5-1Q6L8H4 278 aa2.12□□□□□ -2.07
SLC35F6-202ENST00000414029 KRTAP5-2Q701N4 177 aa2.1□□□□□ -2.07
SLC35F6-202ENST00000414029 LCE1BQ5T7P3 118 aa2.05□□□□□ -2.08
SLC35F6-202ENST00000414029 LCE1CQ5T751 118 aa2.01□□□□□ -2.09
SLC35F6-202ENST00000414029 MUC5ACP98088 5654 aa2□□□□□ -2.09
SLC35F6-202ENST00000414029 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.99□□□□□ -2.09
SLC35F6-202ENST00000414029 KRTAP5-10Q6L8G5 202 aa1.86□□□□□ -2.11
SLC35F6-202ENST00000414029 AHNAK2Q8IVF2 5795 aa1.85□□□□□ -2.11
SLC35F6-202ENST00000414029 KRTAP21-1Q3LI58 79 aa1.83□□□□□ -2.12
SLC35F6-202ENST00000414029 GPR98Q8WXG9 6306 aa1.81□□□□□ -2.12
SLC35F6-202ENST00000414029 KRTAP5-8O75690 187 aa1.8□□□□□ -2.12
SLC35F6-202ENST00000414029 MUC5BQ9HC84 5762 aaPredicted RBP1.79□□□□□ -2.12
SLC35F6-202ENST00000414029 KRTAP5-7Q6L8G8 165 aa1.76□□□□□ -2.13
SLC35F6-202ENST00000414029 KRTAP4-4Q9BYR3 166 aa1.76□□□□□ -2.13
SLC35F6-202ENST00000414029 KRTAP21-2Q3LI59 83 aa1.63□□□□□ -2.15
SLC35F6-202ENST00000414029 AHNAKQ09666 5890 aaKnown RBP1.39□□□□□ -2.19
SLC35F6-202ENST00000414029 PHGR1C9JFL3 82 aa1.35□□□□□ -2.19
SLC35F6-202ENST00000414029 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 96 ms