RNA–Protein interactions for RNA: ENST00000414008.3

HCG27-202, Transcript of HLA complex group 27, humanhuman

TSL 4

Gene HCG27, Length 829 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-202ENST00000414008 A0A1B0GU33 70 aa3.97□□□□□ -1.77
HCG27-202ENST00000414008 A0A1B0GU69 56 aa3.96□□□□□ -1.78
HCG27-202ENST00000414008 SPATA8Q6RVD6 105 aa3.93□□□□□ -1.78
HCG27-202ENST00000414008 OBSCNQ5VST9 7968 aa3.92□□□□□ -1.78
HCG27-202ENST00000414008 A0A0D9SG42 100 aa3.91□□□□□ -1.78
HCG27-202ENST00000414008 PRR15LQ9BU68 103 aa3.89□□□□□ -1.79
HCG27-202ENST00000414008 LUZP6Q538Z0 58 aa3.88□□□□□ -1.79
HCG27-202ENST00000414008 LINC01558Q9Y6Z2 57 aa3.88□□□□□ -1.79
HCG27-202ENST00000414008 SPINT4Q6UDR6 99 aa3.85□□□□□ -1.79
HCG27-202ENST00000414008 KRTAP12-1P59990 96 aa3.83□□□□□ -1.8
HCG27-202ENST00000414008 KRTAP8-1Q8IUC2 63 aa3.81□□□□□ -1.8
HCG27-202ENST00000414008 KRTAP4-3Q9BYR4 195 aa3.81□□□□□ -1.8
HCG27-202ENST00000414008 KMT2DO14686 5537 aa3.8□□□□□ -1.8
HCG27-202ENST00000414008 SPRR2FQ96RM1 72 aa3.77□□□□□ -1.81
HCG27-202ENST00000414008 NEBP20929 6669 aa3.76□□□□□ -1.81
HCG27-202ENST00000414008 UQCR11O14957 56 aa3.76□□□□□ -1.81
HCG27-202ENST00000414008 MUC12Q9UKN1 5478 aa3.75□□□□□ -1.81
HCG27-202ENST00000414008 Q1T7F1 81 aa3.72□□□□□ -1.81
HCG27-202ENST00000414008 MIR22HGQ0VDD5 57 aa3.69□□□□□ -1.82
HCG27-202ENST00000414008 SPRR2EP22531 72 aa3.68□□□□□ -1.82
HCG27-202ENST00000414008 SPRR2BP35325 72 aa3.68□□□□□ -1.82
HCG27-202ENST00000414008 SPRR2AP35326 72 aa3.68□□□□□ -1.82
HCG27-202ENST00000414008 RPS28P62857 69 aaKnown RBP3.67□□□□□ -1.82
HCG27-202ENST00000414008 MDN1Q9NU22 5596 aa3.67□□□□□ -1.82
HCG27-202ENST00000414008 KRTAP5-5Q701N2 237 aaPredicted RBP3.65□□□□□ -1.83
HCG27-202ENST00000414008 K7ERS5 55 aa3.64□□□□□ -1.83
HCG27-202ENST00000414008 C10orf95Q9H7T3 257 aa3.64□□□□□ -1.83
HCG27-202ENST00000414008 TNP1P09430 55 aa3.63□□□□□ -1.83
HCG27-202ENST00000414008 KRTAP20-1Q3LI63 56 aa3.61□□□□□ -1.83
HCG27-202ENST00000414008 A6NED7 52 aa3.58□□□□□ -1.84
HCG27-202ENST00000414008 KRTAP19-7Q3SYF9 63 aa3.58□□□□□ -1.84
HCG27-202ENST00000414008 KRTAP2-3P0C7H8 128 aa3.56□□□□□ -1.84
HCG27-202ENST00000414008 SPRR2DP22532 72 aa3.56□□□□□ -1.84
HCG27-202ENST00000414008 KRTAP2-4Q9BYR9 128 aa3.56□□□□□ -1.84
HCG27-202ENST00000414008 MT1EP04732 61 aa3.55□□□□□ -1.84
HCG27-202ENST00000414008 KRTAP19-5Q3LI72 72 aa3.54□□□□□ -1.84
HCG27-202ENST00000414008 PMAIP1Q13794 54 aa3.53□□□□□ -1.84
HCG27-202ENST00000414008 LCE3DQ9BYE3 92 aa3.51□□□□□ -1.85
HCG27-202ENST00000414008 LCE1CQ5T751 118 aa3.49□□□□□ -1.85
HCG27-202ENST00000414008 LCE1BQ5T7P3 118 aa3.49□□□□□ -1.85
HCG27-202ENST00000414008 KRTAP19-3Q7Z4W3 81 aa3.49□□□□□ -1.85
HCG27-202ENST00000414008 KRTAP25-1Q3LHN0 102 aa3.48□□□□□ -1.85
HCG27-202ENST00000414008 PP632Q6XCG6 107 aa3.47□□□□□ -1.85
HCG27-202ENST00000414008 KRTAP2-1Q9BYU5 128 aa3.46□□□□□ -1.86
HCG27-202ENST00000414008 MT1GP13640 62 aa3.44□□□□□ -1.86
HCG27-202ENST00000414008 CDC42SE1Q9NRR8 79 aa3.44□□□□□ -1.86
HCG27-202ENST00000414008 KRTAP12-3P60328 96 aa3.41□□□□□ -1.86
HCG27-202ENST00000414008 MT1LQ93083 61 aa3.41□□□□□ -1.86
HCG27-202ENST00000414008 ROMO1P60602 79 aa3.38□□□□□ -1.87
HCG27-202ENST00000414008 KRTAP5-2Q701N4 177 aa3.38□□□□□ -1.87
HCG27-202ENST00000414008 SPRR5A0A1B0GTR4 108 aa3.37□□□□□ -1.87
HCG27-202ENST00000414008 MT1MQ8N339 61 aa3.36□□□□□ -1.87
HCG27-202ENST00000414008 DSTQ03001 7570 aaKnown RBP3.32□□□□□ -1.88
HCG27-202ENST00000414008 BRK1Q8WUW1 75 aa3.24□□□□□ -1.89
HCG27-202ENST00000414008 MT4P47944 62 aa3.1□□□□□ -1.91
HCG27-202ENST00000414008 KTN1-AS1Q86SY8 53 aa3.08□□□□□ -1.92
HCG27-202ENST00000414008 HMCN1Q96RW7 5635 aa3.01□□□□□ -1.93
HCG27-202ENST00000414008 KRTAP12-4P60329 112 aa2.97□□□□□ -1.93
HCG27-202ENST00000414008 GPR98Q8WXG9 6306 aa2.94□□□□□ -1.94
HCG27-202ENST00000414008 KRTAP20-2Q3LI61 65 aa2.93□□□□□ -1.94
HCG27-202ENST00000414008 SYNE1Q8NF91 8797 aaKnown RBP2.92□□□□□ -1.94
HCG27-202ENST00000414008 MT1AP04731 61 aa2.91□□□□□ -1.94
HCG27-202ENST00000414008 KRTAP6-1Q3LI64 71 aa2.88□□□□□ -1.95
HCG27-202ENST00000414008 KRTAP5-7Q6L8G8 165 aa2.86□□□□□ -1.95
HCG27-202ENST00000414008 AHNAK2Q8IVF2 5795 aa2.85□□□□□ -1.95
HCG27-202ENST00000414008 MUC19Q7Z5P9 8384 aa2.83□□□□□ -1.96
HCG27-202ENST00000414008 KRTAP5-10Q6L8G5 202 aa2.8□□□□□ -1.96
HCG27-202ENST00000414008 KRTAP5-8O75690 187 aa2.78□□□□□ -1.96
HCG27-202ENST00000414008 KRTAP6-2Q3LI66 62 aa2.72□□□□□ -1.97
HCG27-202ENST00000414008 KRTAP21-2Q3LI59 83 aa2.46□□□□□ -2.02
HCG27-202ENST00000414008 INE1O15225 51 aa2.4□□□□□ -2.03
HCG27-202ENST00000414008 MUC5ACP98088 5654 aa2.36□□□□□ -2.03
HCG27-202ENST00000414008 MUC5BQ9HC84 5762 aaPredicted RBP2.32□□□□□ -2.04
HCG27-202ENST00000414008 AHNAKQ09666 5890 aaKnown RBP2.29□□□□□ -2.04
HCG27-202ENST00000414008 PHGR1C9JFL3 82 aa1.73□□□□□ -2.13
HCG27-202ENST00000414008 PRM1P04553 51 aa1.73□□□□□ -2.13
HCG27-202ENST00000414008 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
HCG27-202ENST00000414008 KRTAP21-1Q3LI58 79 aa1.24□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 55.1 ms