RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 SPRR2BP35325 72 aa2.97□□□□□ -1.93
CPSF4-202ENST00000412686 SPRR2AP35326 72 aa2.97□□□□□ -1.93
CPSF4-202ENST00000412686 UQCR11O14957 56 aa2.96□□□□□ -1.94
CPSF4-202ENST00000412686 PSPHP1O15172 72 aa2.96□□□□□ -1.94
CPSF4-202ENST00000412686 C10orf95Q9H7T3 257 aa2.95□□□□□ -1.94
CPSF4-202ENST00000412686 PRO0628Q9UI54 55 aa2.95□□□□□ -1.94
CPSF4-202ENST00000412686 Q1T7F1 81 aa2.94□□□□□ -1.94
CPSF4-202ENST00000412686 MIR22HGQ0VDD5 57 aa2.93□□□□□ -1.94
CPSF4-202ENST00000412686 KRTAP19-7Q3SYF9 63 aa2.91□□□□□ -1.94
CPSF4-202ENST00000412686 KRTAP20-1Q3LI63 56 aa2.9□□□□□ -1.95
CPSF4-202ENST00000412686 MDN1Q9NU22 5596 aa2.89□□□□□ -1.95
CPSF4-202ENST00000412686 MT1EP04732 61 aa2.87□□□□□ -1.95
CPSF4-202ENST00000412686 TNP1P09430 55 aa2.87□□□□□ -1.95
CPSF4-202ENST00000412686 SPRR2DP22532 72 aa2.86□□□□□ -1.95
CPSF4-202ENST00000412686 KRTAP19-5Q3LI72 72 aa2.86□□□□□ -1.95
CPSF4-202ENST00000412686 LCE3AQ5TA76 89 aa2.86□□□□□ -1.95
CPSF4-202ENST00000412686 A6NED7 52 aa2.85□□□□□ -1.95
CPSF4-202ENST00000412686 KRTAP2-3P0C7H8 128 aa2.84□□□□□ -1.95
CPSF4-202ENST00000412686 LCE1EQ5T753 118 aa2.84□□□□□ -1.95
CPSF4-202ENST00000412686 KRTAP2-4Q9BYR9 128 aa2.84□□□□□ -1.95
CPSF4-202ENST00000412686 BRK1Q8WUW1 75 aa2.82□□□□□ -1.96
CPSF4-202ENST00000412686 KRTAP5-11Q6L8G4 156 aa2.81□□□□□ -1.96
CPSF4-202ENST00000412686 KRTAP19-3Q7Z4W3 81 aa2.81□□□□□ -1.96
CPSF4-202ENST00000412686 K7ERS5 55 aa2.8□□□□□ -1.96
CPSF4-202ENST00000412686 MT1LQ93083 61 aa2.76□□□□□ -1.97
CPSF4-202ENST00000412686 KRTAP2-1Q9BYU5 128 aa2.76□□□□□ -1.97
CPSF4-202ENST00000412686 PMAIP1Q13794 54 aa2.75□□□□□ -1.97
CPSF4-202ENST00000412686 KRTAP25-1Q3LHN0 102 aa2.75□□□□□ -1.97
CPSF4-202ENST00000412686 CDC42SE1Q9NRR8 79 aa2.75□□□□□ -1.97
CPSF4-202ENST00000412686 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.74□□□□□ -1.97
CPSF4-202ENST00000412686 MT1GP13640 62 aa2.73□□□□□ -1.97
CPSF4-202ENST00000412686 KRTAP12-3P60328 96 aa2.72□□□□□ -1.97
CPSF4-202ENST00000412686 MT1MQ8N339 61 aa2.72□□□□□ -1.97
CPSF4-202ENST00000412686 LCE1FQ5T754 118 aa2.7□□□□□ -1.98
CPSF4-202ENST00000412686 KRTAP4-3Q9BYR4 195 aa2.7□□□□□ -1.98
CPSF4-202ENST00000412686 PP632Q6XCG6 107 aa2.69□□□□□ -1.98
CPSF4-202ENST00000412686 KTN1-AS1Q86SY8 53 aa2.69□□□□□ -1.98
CPSF4-202ENST00000412686 DSTQ03001 7570 aaKnown RBP2.68□□□□□ -1.98
CPSF4-202ENST00000412686 ROMO1P60602 79 aa2.67□□□□□ -1.98
CPSF4-202ENST00000412686 NDUFAF8A1L188 74 aa2.63□□□□□ -1.99
CPSF4-202ENST00000412686 PRAC1Q96KF2 57 aa2.62□□□□□ -1.99
CPSF4-202ENST00000412686 MT4P47944 62 aa2.53□□□□□ -2
CPSF4-202ENST00000412686 LCE3CQ5T5A8 94 aa2.53□□□□□ -2
CPSF4-202ENST00000412686 KRTAP9-6A8MVA2 160 aa2.52□□□□□ -2.01
CPSF4-202ENST00000412686 KRTAP5-4Q6L8H1 288 aa2.51□□□□□ -2.01
CPSF4-202ENST00000412686 KRTAP5-5Q701N2 237 aaPredicted RBP2.48□□□□□ -2.01
CPSF4-202ENST00000412686 KRTAP5-1Q6L8H4 278 aa2.39□□□□□ -2.03
CPSF4-202ENST00000412686 SYNE1Q8NF91 8797 aaKnown RBP2.39□□□□□ -2.03
CPSF4-202ENST00000412686 KRTAP20-2Q3LI61 65 aa2.37□□□□□ -2.03
CPSF4-202ENST00000412686 HMCN1Q96RW7 5635 aa2.36□□□□□ -2.03
CPSF4-202ENST00000412686 KRTAP12-4P60329 112 aa2.35□□□□□ -2.03
CPSF4-202ENST00000412686 MT1AP04731 61 aa2.34□□□□□ -2.03
CPSF4-202ENST00000412686 KRTAP6-1Q3LI64 71 aa2.34□□□□□ -2.03
CPSF4-202ENST00000412686 SPRR5A0A1B0GTR4 108 aa2.33□□□□□ -2.04
CPSF4-202ENST00000412686 GPR98Q8WXG9 6306 aa2.32□□□□□ -2.04
CPSF4-202ENST00000412686 LCE3EQ5T5B0 92 aa2.31□□□□□ -2.04
CPSF4-202ENST00000412686 KRTAP5-10Q6L8G5 202 aa2.27□□□□□ -2.05
CPSF4-202ENST00000412686 KRTAP4-4Q9BYR3 166 aa2.27□□□□□ -2.05
CPSF4-202ENST00000412686 KRTAP5-2Q701N4 177 aa2.23□□□□□ -2.05
CPSF4-202ENST00000412686 AHNAK2Q8IVF2 5795 aa2.23□□□□□ -2.05
CPSF4-202ENST00000412686 KRTAP6-2Q3LI66 62 aa2.21□□□□□ -2.06
CPSF4-202ENST00000412686 KRTAP5-7Q6L8G8 165 aa2.15□□□□□ -2.07
CPSF4-202ENST00000412686 LUZP6Q538Z0 58 aa2.13□□□□□ -2.07
CPSF4-202ENST00000412686 OBSCNQ5VST9 7968 aa2.11□□□□□ -2.07
CPSF4-202ENST00000412686 KRTAP5-8O75690 187 aa2.07□□□□□ -2.08
CPSF4-202ENST00000412686 INE1O15225 51 aa1.88□□□□□ -2.11
CPSF4-202ENST00000412686 LCE3DQ9BYE3 92 aa1.88□□□□□ -2.11
CPSF4-202ENST00000412686 LCE1CQ5T751 118 aa1.87□□□□□ -2.11
CPSF4-202ENST00000412686 LCE1BQ5T7P3 118 aa1.87□□□□□ -2.11
CPSF4-202ENST00000412686 MUC5ACP98088 5654 aa1.85□□□□□ -2.11
CPSF4-202ENST00000412686 MUC5BQ9HC84 5762 aaPredicted RBP1.78□□□□□ -2.12
CPSF4-202ENST00000412686 AHNAKQ09666 5890 aaKnown RBP1.75□□□□□ -2.13
CPSF4-202ENST00000412686 KRTAP21-2Q3LI59 83 aa1.53□□□□□ -2.16
CPSF4-202ENST00000412686 MUC19Q7Z5P9 8384 aa1.49□□□□□ -2.17
CPSF4-202ENST00000412686 PRM1P04553 51 aa1.41□□□□□ -2.18
CPSF4-202ENST00000412686 PHGR1C9JFL3 82 aa1.38□□□□□ -2.19
CPSF4-202ENST00000412686 KRTAP21-1Q3LI58 79 aa0.97□□□□□ -2.25
CPSF4-202ENST00000412686 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 63.4 ms