RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 KRTAP19-7Q3SYF9 63 aa5.23□□□□□ -1.57
CPNE1-206ENST00000412056 LCE3AQ5TA76 89 aa5.19□□□□□ -1.58
CPNE1-206ENST00000412056 MDN1Q9NU22 5596 aa5.18□□□□□ -1.58
CPNE1-206ENST00000412056 MT1EP04732 61 aa5.18□□□□□ -1.58
CPNE1-206ENST00000412056 KRTAP20-1Q3LI63 56 aa5.17□□□□□ -1.58
CPNE1-206ENST00000412056 KRTAP19-5Q3LI72 72 aa5.17□□□□□ -1.58
CPNE1-206ENST00000412056 H3BS24 57 aa5.16□□□□□ -1.58
CPNE1-206ENST00000412056 PRAC1Q96KF2 57 aa5.15□□□□□ -1.59
CPNE1-206ENST00000412056 SPRR2DP22532 72 aa5.14□□□□□ -1.59
CPNE1-206ENST00000412056 KRTAP2-3P0C7H8 128 aa5.09□□□□□ -1.59
CPNE1-206ENST00000412056 KRTAP25-1Q3LHN0 102 aa5.09□□□□□ -1.59
CPNE1-206ENST00000412056 KRTAP2-4Q9BYR9 128 aa5.09□□□□□ -1.59
CPNE1-206ENST00000412056 LCE4AQ5TA78 99 aa5.07□□□□□ -1.6
CPNE1-206ENST00000412056 KRTAP19-3Q7Z4W3 81 aa5.07□□□□□ -1.6
CPNE1-206ENST00000412056 LCE1DQ5T752 114 aa5.04□□□□□ -1.6
CPNE1-206ENST00000412056 LCE5AQ5TCM9 118 aa5.04□□□□□ -1.6
CPNE1-206ENST00000412056 MT1LQ93083 61 aa5□□□□□ -1.61
CPNE1-206ENST00000412056 KRTAP4-7Q9BYR0 210 aa4.98□□□□□ -1.61
CPNE1-206ENST00000412056 KRTAP12-3P60328 96 aa4.97□□□□□ -1.61
CPNE1-206ENST00000412056 MT1GP13640 62 aa4.96□□□□□ -1.62
CPNE1-206ENST00000412056 ROMO1P60602 79 aa4.96□□□□□ -1.62
CPNE1-206ENST00000412056 KRTAP2-2Q9BYT5 123 aa4.94□□□□□ -1.62
CPNE1-206ENST00000412056 KRTAP2-1Q9BYU5 128 aa4.94□□□□□ -1.62
CPNE1-206ENST00000412056 PP632Q6XCG6 107 aa4.91□□□□□ -1.62
CPNE1-206ENST00000412056 MT1MQ8N339 61 aa4.91□□□□□ -1.62
CPNE1-206ENST00000412056 KRTAP23-1A1A580 65 aa4.89□□□□□ -1.63
CPNE1-206ENST00000412056 KRTAP4-9Q9BYQ8 210 aa4.89□□□□□ -1.63
CPNE1-206ENST00000412056 KRTAP19-4Q3LI73 84 aa4.87□□□□□ -1.63
CPNE1-206ENST00000412056 KRTAP4-3Q9BYR4 195 aa4.82□□□□□ -1.64
CPNE1-206ENST00000412056 KRTAP4-2Q9BYR5 136 aa4.8□□□□□ -1.64
CPNE1-206ENST00000412056 DSTQ03001 7570 aaKnown RBP4.75□□□□□ -1.65
CPNE1-206ENST00000412056 KRTAP4-11Q9BYQ6 195 aa4.74□□□□□ -1.65
CPNE1-206ENST00000412056 KRTAP15-1Q3LI76 137 aa4.73□□□□□ -1.65
CPNE1-206ENST00000412056 LCE3CQ5T5A8 94 aa4.6□□□□□ -1.67
CPNE1-206ENST00000412056 KRTAP5-4Q6L8H1 288 aa4.52□□□□□ -1.69
CPNE1-206ENST00000412056 MT4P47944 62 aa4.48□□□□□ -1.69
CPNE1-206ENST00000412056 KRTAP5-5Q701N2 237 aaPredicted RBP4.47□□□□□ -1.69
CPNE1-206ENST00000412056 NDUFAF8A1L188 74 aa4.44□□□□□ -1.7
CPNE1-206ENST00000412056 KRTAP9-6A8MVA2 160 aa4.37□□□□□ -1.71
CPNE1-206ENST00000412056 KRTAP12-4P60329 112 aa4.26□□□□□ -1.73
CPNE1-206ENST00000412056 MT1AP04731 61 aa4.25□□□□□ -1.73
CPNE1-206ENST00000412056 KRTAP20-2Q3LI61 65 aa4.25□□□□□ -1.73
CPNE1-206ENST00000412056 HMCN1Q96RW7 5635 aa4.24□□□□□ -1.73
CPNE1-206ENST00000412056 SPRR5A0A1B0GTR4 108 aa4.24□□□□□ -1.73
CPNE1-206ENST00000412056 KRTAP6-1Q3LI64 71 aa4.22□□□□□ -1.73
CPNE1-206ENST00000412056 LUZP6Q538Z0 58 aa4.22□□□□□ -1.73
CPNE1-206ENST00000412056 KRTAP5-3Q6L8H2 238 aa4.19□□□□□ -1.74
CPNE1-206ENST00000412056 SYNE1Q8NF91 8797 aaKnown RBP4.18□□□□□ -1.74
CPNE1-206ENST00000412056 A0A0A0MQY5 61 aa4.17□□□□□ -1.74
CPNE1-206ENST00000412056 AHNAK2Q8IVF2 5795 aa4.06□□□□□ -1.76
CPNE1-206ENST00000412056 GPR98Q8WXG9 6306 aa4.05□□□□□ -1.76
CPNE1-206ENST00000412056 KRTAP5-10Q6L8G5 202 aa4.04□□□□□ -1.76
CPNE1-206ENST00000412056 KRTAP5-2Q701N4 177 aa4.01□□□□□ -1.77
CPNE1-206ENST00000412056 KRTAP6-2Q3LI66 62 aa3.97□□□□□ -1.77
CPNE1-206ENST00000412056 MT3P25713 68 aa3.85□□□□□ -1.79
CPNE1-206ENST00000412056 INE1O15225 51 aa3.84□□□□□ -1.79
CPNE1-206ENST00000412056 KRTAP5-7Q6L8G8 165 aa3.84□□□□□ -1.79
CPNE1-206ENST00000412056 KRTAP5-8O75690 187 aa3.69□□□□□ -1.82
CPNE1-206ENST00000412056 OBSCNQ5VST9 7968 aa3.61□□□□□ -1.83
CPNE1-206ENST00000412056 KRTAP5-1Q6L8H4 278 aa3.55□□□□□ -1.84
CPNE1-206ENST00000412056 LCE1EQ5T753 118 aa3.46□□□□□ -1.86
CPNE1-206ENST00000412056 LCE3DQ9BYE3 92 aa3.35□□□□□ -1.87
CPNE1-206ENST00000412056 MUC5ACP98088 5654 aa3.32□□□□□ -1.88
CPNE1-206ENST00000412056 LCE1BQ5T7P3 118 aa3.28□□□□□ -1.88
CPNE1-206ENST00000412056 KRTAP5-11Q6L8G4 156 aa3.23□□□□□ -1.89
CPNE1-206ENST00000412056 LCE1CQ5T751 118 aa3.22□□□□□ -1.89
CPNE1-206ENST00000412056 MUC5BQ9HC84 5762 aaPredicted RBP3.22□□□□□ -1.89
CPNE1-206ENST00000412056 LCE3EQ5T5B0 92 aa3.21□□□□□ -1.9
CPNE1-206ENST00000412056 AHNAKQ09666 5890 aaKnown RBP3.21□□□□□ -1.9
CPNE1-206ENST00000412056 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.16□□□□□ -1.9
CPNE1-206ENST00000412056 LCE1FQ5T754 118 aa2.88□□□□□ -1.95
CPNE1-206ENST00000412056 KRTAP21-2Q3LI59 83 aa2.77□□□□□ -1.97
CPNE1-206ENST00000412056 KRTAP4-4Q9BYR3 166 aa2.66□□□□□ -1.98
CPNE1-206ENST00000412056 PRM1P04553 51 aa2.57□□□□□ -2
CPNE1-206ENST00000412056 PHGR1C9JFL3 82 aa2.5□□□□□ -2.01
CPNE1-206ENST00000412056 MUC19Q7Z5P9 8384 aa2.21□□□□□ -2.06
CPNE1-206ENST00000412056 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
CPNE1-206ENST00000412056 MUC16Q8WXI7 14507 aa1.63□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 109.7 ms