RNA–Protein interactions for RNA: ENST00000411796.6

CCDC196-203, Transcript of coiled-coil domain containing 196, humanhuman

TSL 1 (best)

Gene CCDC196, Length 1,132 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-203ENST00000411796 SPATA8Q6RVD6 105 aa3.71□□□□□ -1.82
CCDC196-203ENST00000411796 MT1BP07438 61 aa3.68□□□□□ -1.82
CCDC196-203ENST00000411796 KRTAP19-6Q3LI70 58 aa3.68□□□□□ -1.82
CCDC196-203ENST00000411796 KMT2DO14686 5537 aa3.68□□□□□ -1.82
CCDC196-203ENST00000411796 MIR22HGQ0VDD5 57 aa3.67□□□□□ -1.82
CCDC196-203ENST00000411796 PSPHP1O15172 72 aa3.66□□□□□ -1.82
CCDC196-203ENST00000411796 KRTAP13-4Q3LI77 160 aa3.66□□□□□ -1.82
CCDC196-203ENST00000411796 PRO2289Q9P1D8 64 aa3.66□□□□□ -1.82
CCDC196-203ENST00000411796 KRTAP2-3P0C7H8 128 aa3.64□□□□□ -1.83
CCDC196-203ENST00000411796 KRTAP2-4Q9BYR9 128 aa3.64□□□□□ -1.83
CCDC196-203ENST00000411796 K7ERS5 55 aa3.63□□□□□ -1.83
CCDC196-203ENST00000411796 A6NED7 52 aa3.62□□□□□ -1.83
CCDC196-203ENST00000411796 LINC01554Q52M75 96 aa3.62□□□□□ -1.83
CCDC196-203ENST00000411796 CDC42SE1Q9NRR8 79 aa3.61□□□□□ -1.83
CCDC196-203ENST00000411796 KRTAP12-1P59990 96 aa3.6□□□□□ -1.83
CCDC196-203ENST00000411796 MDN1Q9NU22 5596 aa3.57□□□□□ -1.84
CCDC196-203ENST00000411796 A0A0D9SG42 100 aa3.55□□□□□ -1.84
CCDC196-203ENST00000411796 CAMK2N1Q7Z7J9 78 aa3.55□□□□□ -1.84
CCDC196-203ENST00000411796 SPINT4Q6UDR6 99 aa3.54□□□□□ -1.84
CCDC196-203ENST00000411796 GPR98Q8WXG9 6306 aa3.54□□□□□ -1.84
CCDC196-203ENST00000411796 MT1XP80297 61 aa3.52□□□□□ -1.85
CCDC196-203ENST00000411796 KRTAP2-1Q9BYU5 128 aa3.49□□□□□ -1.85
CCDC196-203ENST00000411796 LCE3AQ5TA76 89 aa3.48□□□□□ -1.85
CCDC196-203ENST00000411796 TNP1P09430 55 aa3.43□□□□□ -1.86
CCDC196-203ENST00000411796 KRTAP25-1Q3LHN0 102 aa3.42□□□□□ -1.86
CCDC196-203ENST00000411796 BRK1Q8WUW1 75 aa3.4□□□□□ -1.87
CCDC196-203ENST00000411796 C10orf95Q9H7T3 257 aa3.39□□□□□ -1.87
CCDC196-203ENST00000411796 ROMO1P60602 79 aa3.38□□□□□ -1.87
CCDC196-203ENST00000411796 KRTAP4-3Q9BYR4 195 aa3.38□□□□□ -1.87
CCDC196-203ENST00000411796 PRO0628Q9UI54 55 aa3.36□□□□□ -1.87
CCDC196-203ENST00000411796 OBSCNQ5VST9 7968 aa3.35□□□□□ -1.87
CCDC196-203ENST00000411796 SPRR2EP22531 72 aa3.33□□□□□ -1.88
CCDC196-203ENST00000411796 SPRR2BP35325 72 aa3.33□□□□□ -1.88
CCDC196-203ENST00000411796 SPRR2AP35326 72 aa3.33□□□□□ -1.88
CCDC196-203ENST00000411796 PP632Q6XCG6 107 aa3.33□□□□□ -1.88
CCDC196-203ENST00000411796 PMAIP1Q13794 54 aa3.3□□□□□ -1.88
CCDC196-203ENST00000411796 KRTAP8-1Q8IUC2 63 aa3.26□□□□□ -1.89
CCDC196-203ENST00000411796 KRTAP5-2Q701N4 177 aa3.25□□□□□ -1.89
CCDC196-203ENST00000411796 SPRR2FQ96RM1 72 aa3.23□□□□□ -1.89
CCDC196-203ENST00000411796 DSTQ03001 7570 aaKnown RBP3.23□□□□□ -1.89
CCDC196-203ENST00000411796 SPRR2DP22532 72 aa3.22□□□□□ -1.89
CCDC196-203ENST00000411796 KRTAP5-5Q701N2 237 aaPredicted RBP3.22□□□□□ -1.89
CCDC196-203ENST00000411796 LCE3DQ9BYE3 92 aa3.21□□□□□ -1.9
CCDC196-203ENST00000411796 KRTAP19-7Q3SYF9 63 aa3.16□□□□□ -1.9
CCDC196-203ENST00000411796 KRTAP12-3P60328 96 aa3.14□□□□□ -1.91
CCDC196-203ENST00000411796 MT1EP04732 61 aa3.11□□□□□ -1.91
CCDC196-203ENST00000411796 KRTAP19-5Q3LI72 72 aa3.11□□□□□ -1.91
CCDC196-203ENST00000411796 KTN1-AS1Q86SY8 53 aa3.11□□□□□ -1.91
CCDC196-203ENST00000411796 MT1GP13640 62 aa3.1□□□□□ -1.91
CCDC196-203ENST00000411796 SPRR5A0A1B0GTR4 108 aa3.08□□□□□ -1.92
CCDC196-203ENST00000411796 AHNAK2Q8IVF2 5795 aa3.07□□□□□ -1.92
CCDC196-203ENST00000411796 KRTAP5-10Q6L8G5 202 aa3.07□□□□□ -1.92
CCDC196-203ENST00000411796 KRTAP19-3Q7Z4W3 81 aa3.07□□□□□ -1.92
CCDC196-203ENST00000411796 HMCN1Q96RW7 5635 aa3.03□□□□□ -1.92
CCDC196-203ENST00000411796 KRTAP5-7Q6L8G8 165 aa3.02□□□□□ -1.93
CCDC196-203ENST00000411796 MT1LQ93083 61 aa3.02□□□□□ -1.93
CCDC196-203ENST00000411796 LCE1CQ5T751 118 aa3.01□□□□□ -1.93
CCDC196-203ENST00000411796 LCE1BQ5T7P3 118 aa3.01□□□□□ -1.93
CCDC196-203ENST00000411796 MT1MQ8N339 61 aa2.93□□□□□ -1.94
CCDC196-203ENST00000411796 MT4P47944 62 aa2.88□□□□□ -1.95
CCDC196-203ENST00000411796 KRTAP5-8O75690 187 aa2.75□□□□□ -1.97
CCDC196-203ENST00000411796 LUZP6Q538Z0 58 aa2.74□□□□□ -1.97
CCDC196-203ENST00000411796 AHNAKQ09666 5890 aaKnown RBP2.7□□□□□ -1.98
CCDC196-203ENST00000411796 MUC5ACP98088 5654 aa2.62□□□□□ -1.99
CCDC196-203ENST00000411796 KRTAP12-4P60329 112 aa2.62□□□□□ -1.99
CCDC196-203ENST00000411796 MT1AP04731 61 aa2.61□□□□□ -1.99
CCDC196-203ENST00000411796 MUC5BQ9HC84 5762 aaPredicted RBP2.58□□□□□ -2
CCDC196-203ENST00000411796 SYNE1Q8NF91 8797 aaKnown RBP2.57□□□□□ -2
CCDC196-203ENST00000411796 KRTAP20-2Q3LI61 65 aa2.54□□□□□ -2
CCDC196-203ENST00000411796 KRTAP6-1Q3LI64 71 aa2.5□□□□□ -2.01
CCDC196-203ENST00000411796 MUC19Q7Z5P9 8384 aa2.42□□□□□ -2.02
CCDC196-203ENST00000411796 KRTAP6-2Q3LI66 62 aa2.33□□□□□ -2.04
CCDC196-203ENST00000411796 KRTAP21-2Q3LI59 83 aa2.14□□□□□ -2.07
CCDC196-203ENST00000411796 INE1O15225 51 aa2.12□□□□□ -2.07
CCDC196-203ENST00000411796 PHGR1C9JFL3 82 aa1.82□□□□□ -2.12
CCDC196-203ENST00000411796 PRM1P04553 51 aa1.66□□□□□ -2.14
CCDC196-203ENST00000411796 KRTAP21-1Q3LI58 79 aa1.37□□□□□ -2.19
CCDC196-203ENST00000411796 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 41.1 ms