RNA–Protein interactions for RNA: ENST00000409884.5

LRRTM4-204, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRRTM4, Length 2,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-204ENST00000409884 LCE3AQ5TA76 89 aa4.18□□□□□ -1.74
LRRTM4-204ENST00000409884 KRTAP19-6Q3LI70 58 aa4.16□□□□□ -1.74
LRRTM4-204ENST00000409884 KRTAP10-12P60413 245 aa4.14□□□□□ -1.75
LRRTM4-204ENST00000409884 FCGBPQ9Y6R7 5405 aaPredicted RBP4.13□□□□□ -1.75
LRRTM4-204ENST00000409884 KRTAP8-1Q8IUC2 63 aa4.01□□□□□ -1.77
LRRTM4-204ENST00000409884 KRTAP19-5Q3LI72 72 aa3.99□□□□□ -1.77
LRRTM4-204ENST00000409884 KRTAP4-11Q9BYQ6 195 aa3.97□□□□□ -1.77
LRRTM4-204ENST00000409884 KRTAP12-3P60328 96 aa3.97□□□□□ -1.77
LRRTM4-204ENST00000409884 MACF1Q9UPN3 7388 aaKnown RBP3.96□□□□□ -1.78
LRRTM4-204ENST00000409884 KRTAP19-7Q3SYF9 63 aa3.92□□□□□ -1.78
LRRTM4-204ENST00000409884 SYNE2Q8WXH0 6885 aaKnown RBP3.88□□□□□ -1.79
LRRTM4-204ENST00000409884 MUC12Q9UKN1 5478 aa3.87□□□□□ -1.79
LRRTM4-204ENST00000409884 MT1EP04732 61 aa3.83□□□□□ -1.8
LRRTM4-204ENST00000409884 SPRR2FQ96RM1 72 aa3.77□□□□□ -1.81
LRRTM4-204ENST00000409884 KRTAP9-7A8MTY7 169 aa3.76□□□□□ -1.81
LRRTM4-204ENST00000409884 MT1LQ93083 61 aa3.76□□□□□ -1.81
LRRTM4-204ENST00000409884 KRTAP2-2Q9BYT5 123 aa3.75□□□□□ -1.81
LRRTM4-204ENST00000409884 KRTAP6-3Q3LI67 103 aa3.72□□□□□ -1.81
LRRTM4-204ENST00000409884 KRTAP2-3P0C7H8 128 aa3.7□□□□□ -1.82
LRRTM4-204ENST00000409884 LCE3CQ5T5A8 94 aa3.7□□□□□ -1.82
LRRTM4-204ENST00000409884 KRTAP2-4Q9BYR9 128 aa3.7□□□□□ -1.82
LRRTM4-204ENST00000409884 KRTAP2-1Q9BYU5 128 aa3.7□□□□□ -1.82
LRRTM4-204ENST00000409884 MDN1Q9NU22 5596 aa3.7□□□□□ -1.82
LRRTM4-204ENST00000409884 KRTAP5-9P26371 169 aa3.67□□□□□ -1.82
LRRTM4-204ENST00000409884 KRTAP4-3Q9BYR4 195 aa3.66□□□□□ -1.82
LRRTM4-204ENST00000409884 KRTAP19-3Q7Z4W3 81 aa3.65□□□□□ -1.83
LRRTM4-204ENST00000409884 DSTQ03001 7570 aaKnown RBP3.64□□□□□ -1.83
LRRTM4-204ENST00000409884 KRTAP9-6A8MVA2 160 aa3.6□□□□□ -1.83
LRRTM4-204ENST00000409884 LCE5AQ5TCM9 118 aa3.6□□□□□ -1.83
LRRTM4-204ENST00000409884 MT1MQ8N339 61 aa3.6□□□□□ -1.83
LRRTM4-204ENST00000409884 MT1GP13640 62 aa3.59□□□□□ -1.84
LRRTM4-204ENST00000409884 LCE1AQ5T7P2 110 aa3.59□□□□□ -1.84
LRRTM4-204ENST00000409884 SPRR2EP22531 72 aa3.55□□□□□ -1.84
LRRTM4-204ENST00000409884 SPRR2BP35325 72 aa3.55□□□□□ -1.84
LRRTM4-204ENST00000409884 SPRR2AP35326 72 aa3.55□□□□□ -1.84
LRRTM4-204ENST00000409884 NEBP20929 6669 aa3.49□□□□□ -1.85
LRRTM4-204ENST00000409884 KRTAP19-4Q3LI73 84 aa3.48□□□□□ -1.85
LRRTM4-204ENST00000409884 KRTAP12-4P60329 112 aa3.44□□□□□ -1.86
LRRTM4-204ENST00000409884 SPRR2DP22532 72 aa3.43□□□□□ -1.86
LRRTM4-204ENST00000409884 LCE1EQ5T753 118 aa3.38□□□□□ -1.87
LRRTM4-204ENST00000409884 KRTAP20-1Q3LI63 56 aa3.32□□□□□ -1.88
LRRTM4-204ENST00000409884 HMCN1Q96RW7 5635 aa3.25□□□□□ -1.89
LRRTM4-204ENST00000409884 KRTAP5-5Q701N2 237 aaPredicted RBP3.23□□□□□ -1.89
LRRTM4-204ENST00000409884 SYNE1Q8NF91 8797 aaKnown RBP3.23□□□□□ -1.89
LRRTM4-204ENST00000409884 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.22□□□□□ -1.89
LRRTM4-204ENST00000409884 KRTAP6-1Q3LI64 71 aa3.2□□□□□ -1.9
LRRTM4-204ENST00000409884 PRM1P04553 51 aa3.17□□□□□ -1.9
LRRTM4-204ENST00000409884 LCE1FQ5T754 118 aa3.16□□□□□ -1.9
LRRTM4-204ENST00000409884 MT1AP04731 61 aa3.15□□□□□ -1.91
LRRTM4-204ENST00000409884 KRTAP5-4Q6L8H1 288 aa3.05□□□□□ -1.92
LRRTM4-204ENST00000409884 MT4P47944 62 aa3.03□□□□□ -1.92
LRRTM4-204ENST00000409884 LCE4AQ5TA78 99 aa3.01□□□□□ -1.93
LRRTM4-204ENST00000409884 OBSCNQ5VST9 7968 aa2.98□□□□□ -1.93
LRRTM4-204ENST00000409884 KRTAP6-2Q3LI66 62 aa2.95□□□□□ -1.94
LRRTM4-204ENST00000409884 LCE3EQ5T5B0 92 aa2.91□□□□□ -1.94
LRRTM4-204ENST00000409884 KRTAP20-2Q3LI61 65 aa2.88□□□□□ -1.95
LRRTM4-204ENST00000409884 LCE3DQ9BYE3 92 aa2.85□□□□□ -1.95
LRRTM4-204ENST00000409884 MT3P25713 68 aa2.84□□□□□ -1.96
LRRTM4-204ENST00000409884 KRTAP5-2Q701N4 177 aa2.77□□□□□ -1.97
LRRTM4-204ENST00000409884 AHNAK2Q8IVF2 5795 aa2.68□□□□□ -1.98
LRRTM4-204ENST00000409884 KRTAP5-11Q6L8G4 156 aa2.59□□□□□ -1.99
LRRTM4-204ENST00000409884 GPR98Q8WXG9 6306 aa2.58□□□□□ -2
LRRTM4-204ENST00000409884 KRTAP5-10Q6L8G5 202 aa2.57□□□□□ -2
LRRTM4-204ENST00000409884 KRTAP4-4Q9BYR3 166 aa2.57□□□□□ -2
LRRTM4-204ENST00000409884 KRTAP5-1Q6L8H4 278 aa2.56□□□□□ -2
LRRTM4-204ENST00000409884 MUC5BQ9HC84 5762 aaPredicted RBP2.47□□□□□ -2.01
LRRTM4-204ENST00000409884 KRTAP5-8O75690 187 aa2.42□□□□□ -2.02
LRRTM4-204ENST00000409884 KRTAP5-7Q6L8G8 165 aa2.42□□□□□ -2.02
LRRTM4-204ENST00000409884 LCE1BQ5T7P3 118 aa2.41□□□□□ -2.02
LRRTM4-204ENST00000409884 MUC5ACP98088 5654 aa2.36□□□□□ -2.03
LRRTM4-204ENST00000409884 LCE1CQ5T751 118 aa2.28□□□□□ -2.04
LRRTM4-204ENST00000409884 MUC19Q7Z5P9 8384 aa2.16□□□□□ -2.06
LRRTM4-204ENST00000409884 KRTAP21-1Q3LI58 79 aa2.11□□□□□ -2.07
LRRTM4-204ENST00000409884 AHNAKQ09666 5890 aaKnown RBP2.1□□□□□ -2.07
LRRTM4-204ENST00000409884 KRTAP21-2Q3LI59 83 aa2.08□□□□□ -2.08
LRRTM4-204ENST00000409884 PHGR1C9JFL3 82 aa1.75□□□□□ -2.13
LRRTM4-204ENST00000409884 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 5.6 ms