RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 KRTAP19-3Q7Z4W3 81 aa7.44□□□□□ -1.22
C4orf48-202ENST00000409860 PRO0628Q9UI54 55 aa7.42□□□□□ -1.22
C4orf48-202ENST00000409860 SPRR2DP22532 72 aa7.39□□□□□ -1.23
C4orf48-202ENST00000409860 MT1LQ93083 61 aa7.37□□□□□ -1.23
C4orf48-202ENST00000409860 LCE5AQ5TCM9 118 aa7.36□□□□□ -1.23
C4orf48-202ENST00000409860 MT1GP13640 62 aa7.33□□□□□ -1.24
C4orf48-202ENST00000409860 KRTAP20-1Q3LI63 56 aa7.31□□□□□ -1.24
C4orf48-202ENST00000409860 KRTAP2-3P0C7H8 128 aa7.22□□□□□ -1.25
C4orf48-202ENST00000409860 KRTAP2-4Q9BYR9 128 aa7.22□□□□□ -1.25
C4orf48-202ENST00000409860 KRTAP15-1Q3LI76 137 aa7.21□□□□□ -1.26
C4orf48-202ENST00000409860 MT1MQ8N339 61 aa7.21□□□□□ -1.26
C4orf48-202ENST00000409860 LCE3BQ5TA77 95 aa7.13□□□□□ -1.27
C4orf48-202ENST00000409860 KRTAP19-4Q3LI73 84 aa7.12□□□□□ -1.27
C4orf48-202ENST00000409860 PRAC1Q96KF2 57 aa7.04□□□□□ -1.28
C4orf48-202ENST00000409860 KRTAP2-2Q9BYT5 123 aa7.03□□□□□ -1.28
C4orf48-202ENST00000409860 KRTAP2-1Q9BYU5 128 aa7.03□□□□□ -1.28
C4orf48-202ENST00000409860 KRTAP4-7Q9BYR0 210 aa7.02□□□□□ -1.29
C4orf48-202ENST00000409860 KRTAP4-3Q9BYR4 195 aa7□□□□□ -1.29
C4orf48-202ENST00000409860 KTN1-AS1Q86SY8 53 aa6.97□□□□□ -1.29
C4orf48-202ENST00000409860 LCE3CQ5T5A8 94 aa6.95□□□□□ -1.3
C4orf48-202ENST00000409860 DSTQ03001 7570 aaKnown RBP6.91□□□□□ -1.3
C4orf48-202ENST00000409860 SVIPQ8NHG7 77 aa6.63□□□□□ -1.35
C4orf48-202ENST00000409860 LOC100996750A0A140TA64 210 aa6.62□□□□□ -1.35
C4orf48-202ENST00000409860 LCE4AQ5TA78 99 aa6.57□□□□□ -1.36
C4orf48-202ENST00000409860 KRTAP5-5Q701N2 237 aaPredicted RBP6.54□□□□□ -1.36
C4orf48-202ENST00000409860 KRTAP5-4Q6L8H1 288 aa6.52□□□□□ -1.37
C4orf48-202ENST00000409860 KRTAP9-6A8MVA2 160 aa6.51□□□□□ -1.37
C4orf48-202ENST00000409860 KRTAP4-9Q9BYQ8 210 aa6.46□□□□□ -1.38
C4orf48-202ENST00000409860 MT4P47944 62 aa6.41□□□□□ -1.38
C4orf48-202ENST00000409860 LCE1DQ5T752 114 aa6.39□□□□□ -1.39
C4orf48-202ENST00000409860 SPRR5A0A1B0GTR4 108 aa6.33□□□□□ -1.4
C4orf48-202ENST00000409860 MT1AP04731 61 aa6.3□□□□□ -1.4
C4orf48-202ENST00000409860 KRTAP12-4P60329 112 aa6.27□□□□□ -1.41
C4orf48-202ENST00000409860 HMCN1Q96RW7 5635 aa6.27□□□□□ -1.41
C4orf48-202ENST00000409860 KRTAP4-6Q9BYQ5 205 aa6.26□□□□□ -1.41
C4orf48-202ENST00000409860 KRTAP6-1Q3LI64 71 aa6.2□□□□□ -1.42
C4orf48-202ENST00000409860 SYNE1Q8NF91 8797 aaKnown RBP6.19□□□□□ -1.42
C4orf48-202ENST00000409860 KRTAP20-2Q3LI61 65 aa6.13□□□□□ -1.43
C4orf48-202ENST00000409860 GPR98Q8WXG9 6306 aa6.12□□□□□ -1.43
C4orf48-202ENST00000409860 KRTAP9-4Q9BYQ2 154 aa6.01□□□□□ -1.45
C4orf48-202ENST00000409860 KRTAP5-3Q6L8H2 238 aa5.91□□□□□ -1.46
C4orf48-202ENST00000409860 LUZP6Q538Z0 58 aa5.9□□□□□ -1.46
C4orf48-202ENST00000409860 AHNAK2Q8IVF2 5795 aa5.88□□□□□ -1.47
C4orf48-202ENST00000409860 KRTAP6-2Q3LI66 62 aa5.82□□□□□ -1.48
C4orf48-202ENST00000409860 KRTAP5-2Q701N4 177 aa5.82□□□□□ -1.48
C4orf48-202ENST00000409860 MT3P25713 68 aa5.74□□□□□ -1.49
C4orf48-202ENST00000409860 KRTAP5-10Q6L8G5 202 aa5.71□□□□□ -1.5
C4orf48-202ENST00000409860 KRTAP5-7Q6L8G8 165 aa5.47□□□□□ -1.53
C4orf48-202ENST00000409860 KRTAP4-11Q9BYQ6 195 aa5.46□□□□□ -1.54
C4orf48-202ENST00000409860 NDUFAF8A1L188 74 aa5.28□□□□□ -1.56
C4orf48-202ENST00000409860 KRTAP5-8O75690 187 aa5.25□□□□□ -1.57
C4orf48-202ENST00000409860 OBSCNQ5VST9 7968 aa5.22□□□□□ -1.57
C4orf48-202ENST00000409860 LCE3DQ9BYE3 92 aa5.14□□□□□ -1.59
C4orf48-202ENST00000409860 LCE1EQ5T753 118 aa5.11□□□□□ -1.59
C4orf48-202ENST00000409860 KRTAP5-1Q6L8H4 278 aa5.1□□□□□ -1.59
C4orf48-202ENST00000409860 MUC5ACP98088 5654 aa4.99□□□□□ -1.61
C4orf48-202ENST00000409860 LCE3EQ5T5B0 92 aa4.94□□□□□ -1.62
C4orf48-202ENST00000409860 KRTAP9-9Q9BYP9 154 aa4.91□□□□□ -1.62
C4orf48-202ENST00000409860 MUC5BQ9HC84 5762 aaPredicted RBP4.82□□□□□ -1.64
C4orf48-202ENST00000409860 AHNAKQ09666 5890 aaKnown RBP4.79□□□□□ -1.64
C4orf48-202ENST00000409860 LCE1BQ5T7P3 118 aa4.79□□□□□ -1.64
C4orf48-202ENST00000409860 KRTAP4-2Q9BYR5 136 aa4.77□□□□□ -1.65
C4orf48-202ENST00000409860 LCE1CQ5T751 118 aa4.74□□□□□ -1.65
C4orf48-202ENST00000409860 A0A0A0MQY5 61 aa4.53□□□□□ -1.68
C4orf48-202ENST00000409860 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.38□□□□□ -1.71
C4orf48-202ENST00000409860 INE1O15225 51 aa4.36□□□□□ -1.71
C4orf48-202ENST00000409860 KRTAP5-11Q6L8G4 156 aa4.25□□□□□ -1.73
C4orf48-202ENST00000409860 KRTAP4-12Q9BQ66 201 aa4.11□□□□□ -1.75
C4orf48-202ENST00000409860 KRTAP21-2Q3LI59 83 aa4.07□□□□□ -1.76
C4orf48-202ENST00000409860 PRM1P04553 51 aa4.03□□□□□ -1.76
C4orf48-202ENST00000409860 LCE1FQ5T754 118 aa4□□□□□ -1.77
C4orf48-202ENST00000409860 KRTAP4-4Q9BYR3 166 aa3.65□□□□□ -1.83
C4orf48-202ENST00000409860 PHGR1C9JFL3 82 aa3.64□□□□□ -1.83
C4orf48-202ENST00000409860 H3BS24 57 aa3.56□□□□□ -1.84
C4orf48-202ENST00000409860 MUC19Q7Z5P9 8384 aa3.18□□□□□ -1.9
C4orf48-202ENST00000409860 KRTAP21-1Q3LI58 79 aa2.51□□□□□ -2.01
C4orf48-202ENST00000409860 MUC16Q8WXI7 14507 aa2.34□□□□□ -2.03
Retrieved 77 of 20,778 RNA–protein pairs in 6.5 ms