RNA–Protein interactions for RNA: ENST00000409857.7

GCFC2-202, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5 BASIC

Gene GCFC2, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-202ENST00000409857 SPRR2FQ96RM1 72 aa6.28□□□□□ -1.4
GCFC2-202ENST00000409857 KRTAP19-7Q3SYF9 63 aa6.17□□□□□ -1.42
GCFC2-202ENST00000409857 MUC12Q9UKN1 5478 aa6.15□□□□□ -1.43
GCFC2-202ENST00000409857 KRTAP19-5Q3LI72 72 aa6.13□□□□□ -1.43
GCFC2-202ENST00000409857 NEBP20929 6669 aa6.11□□□□□ -1.43
GCFC2-202ENST00000409857 MT1EP04732 61 aa6.09□□□□□ -1.43
GCFC2-202ENST00000409857 LCE1AQ5T7P2 110 aa6.08□□□□□ -1.44
GCFC2-202ENST00000409857 SPRR2EP22531 72 aa6.08□□□□□ -1.44
GCFC2-202ENST00000409857 SPRR2BP35325 72 aa6.08□□□□□ -1.44
GCFC2-202ENST00000409857 SPRR2AP35326 72 aa6.08□□□□□ -1.44
GCFC2-202ENST00000409857 LCE3CQ5T5A8 94 aa6.04□□□□□ -1.44
GCFC2-202ENST00000409857 MDN1Q9NU22 5596 aa6.03□□□□□ -1.44
GCFC2-202ENST00000409857 KRTAP19-3Q7Z4W3 81 aa5.95□□□□□ -1.46
GCFC2-202ENST00000409857 KRTAP9-6A8MVA2 160 aa5.92□□□□□ -1.46
GCFC2-202ENST00000409857 LCE5AQ5TCM9 118 aa5.91□□□□□ -1.46
GCFC2-202ENST00000409857 MT1LQ93083 61 aa5.89□□□□□ -1.47
GCFC2-202ENST00000409857 SPRR2DP22532 72 aa5.88□□□□□ -1.47
GCFC2-202ENST00000409857 MT1GP13640 62 aa5.87□□□□□ -1.47
GCFC2-202ENST00000409857 KRTAP4-7Q9BYR0 210 aa5.84□□□□□ -1.47
GCFC2-202ENST00000409857 KRTAP20-1Q3LI63 56 aa5.79□□□□□ -1.48
GCFC2-202ENST00000409857 KRTAP2-3P0C7H8 128 aa5.78□□□□□ -1.48
GCFC2-202ENST00000409857 KRTAP2-4Q9BYR9 128 aa5.78□□□□□ -1.48
GCFC2-202ENST00000409857 KRTAP19-4Q3LI73 84 aa5.76□□□□□ -1.49
GCFC2-202ENST00000409857 MT1MQ8N339 61 aa5.76□□□□□ -1.49
GCFC2-202ENST00000409857 LCE3BQ5TA77 95 aa5.69□□□□□ -1.5
GCFC2-202ENST00000409857 KRTAP2-1Q9BYU5 128 aa5.67□□□□□ -1.5
GCFC2-202ENST00000409857 KRTAP2-2Q9BYT5 123 aa5.63□□□□□ -1.51
GCFC2-202ENST00000409857 KRTAP4-3Q9BYR4 195 aa5.56□□□□□ -1.52
GCFC2-202ENST00000409857 DSTQ03001 7570 aaKnown RBP5.5□□□□□ -1.53
GCFC2-202ENST00000409857 LOC100996750A0A140TA64 210 aa5.43□□□□□ -1.54
GCFC2-202ENST00000409857 LCE4AQ5TA78 99 aa5.27□□□□□ -1.57
GCFC2-202ENST00000409857 KRTAP5-5Q701N2 237 aaPredicted RBP5.27□□□□□ -1.57
GCFC2-202ENST00000409857 KRTAP5-4Q6L8H1 288 aa5.26□□□□□ -1.57
GCFC2-202ENST00000409857 KRTAP4-9Q9BYQ8 210 aa5.13□□□□□ -1.59
GCFC2-202ENST00000409857 LCE1DQ5T752 114 aa5.1□□□□□ -1.59
GCFC2-202ENST00000409857 KRTAP12-4P60329 112 aa5.09□□□□□ -1.59
GCFC2-202ENST00000409857 MT4P47944 62 aa5.07□□□□□ -1.6
GCFC2-202ENST00000409857 MT1AP04731 61 aa5.03□□□□□ -1.6
GCFC2-202ENST00000409857 KRTAP4-6Q9BYQ5 205 aa5□□□□□ -1.61
GCFC2-202ENST00000409857 HMCN1Q96RW7 5635 aa4.97□□□□□ -1.61
GCFC2-202ENST00000409857 KRTAP6-1Q3LI64 71 aa4.95□□□□□ -1.62
GCFC2-202ENST00000409857 KRTAP20-2Q3LI61 65 aa4.9□□□□□ -1.62
GCFC2-202ENST00000409857 SYNE1Q8NF91 8797 aaKnown RBP4.88□□□□□ -1.63
GCFC2-202ENST00000409857 KRTAP9-4Q9BYQ2 154 aa4.82□□□□□ -1.64
GCFC2-202ENST00000409857 KRTAP5-3Q6L8H2 238 aa4.76□□□□□ -1.65
GCFC2-202ENST00000409857 KRTAP5-2Q701N4 177 aa4.69□□□□□ -1.66
GCFC2-202ENST00000409857 LCE3DQ9BYE3 92 aa4.68□□□□□ -1.66
GCFC2-202ENST00000409857 KRTAP6-2Q3LI66 62 aa4.64□□□□□ -1.67
GCFC2-202ENST00000409857 LCE3EQ5T5B0 92 aa4.62□□□□□ -1.67
GCFC2-202ENST00000409857 AHNAK2Q8IVF2 5795 aa4.61□□□□□ -1.67
GCFC2-202ENST00000409857 MT3P25713 68 aa4.58□□□□□ -1.68
GCFC2-202ENST00000409857 PRM1P04553 51 aa4.54□□□□□ -1.68
GCFC2-202ENST00000409857 KRTAP5-10Q6L8G5 202 aa4.52□□□□□ -1.69
GCFC2-202ENST00000409857 GPR98Q8WXG9 6306 aa4.52□□□□□ -1.69
GCFC2-202ENST00000409857 OBSCNQ5VST9 7968 aa4.47□□□□□ -1.69
GCFC2-202ENST00000409857 KRTAP4-11Q9BYQ6 195 aa4.36□□□□□ -1.71
GCFC2-202ENST00000409857 KRTAP5-7Q6L8G8 165 aa4.3□□□□□ -1.72
GCFC2-202ENST00000409857 KRTAP5-8O75690 187 aa4.22□□□□□ -1.73
GCFC2-202ENST00000409857 LCE1EQ5T753 118 aa4.13□□□□□ -1.75
GCFC2-202ENST00000409857 KRTAP5-1Q6L8H4 278 aa4.11□□□□□ -1.75
GCFC2-202ENST00000409857 MUC5ACP98088 5654 aa3.93□□□□□ -1.78
GCFC2-202ENST00000409857 KRTAP9-9Q9BYP9 154 aa3.9□□□□□ -1.78
GCFC2-202ENST00000409857 LCE1CQ5T751 118 aa3.83□□□□□ -1.8
GCFC2-202ENST00000409857 LCE1BQ5T7P3 118 aa3.83□□□□□ -1.8
GCFC2-202ENST00000409857 KRTAP4-2Q9BYR5 136 aa3.82□□□□□ -1.8
GCFC2-202ENST00000409857 MUC5BQ9HC84 5762 aaPredicted RBP3.72□□□□□ -1.81
GCFC2-202ENST00000409857 AHNAKQ09666 5890 aaKnown RBP3.65□□□□□ -1.83
GCFC2-202ENST00000409857 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.56□□□□□ -1.84
GCFC2-202ENST00000409857 KRTAP5-11Q6L8G4 156 aa3.42□□□□□ -1.86
GCFC2-202ENST00000409857 KRTAP4-12Q9BQ66 201 aa3.4□□□□□ -1.86
GCFC2-202ENST00000409857 KRTAP21-2Q3LI59 83 aa3.27□□□□□ -1.89
GCFC2-202ENST00000409857 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
GCFC2-202ENST00000409857 PHGR1C9JFL3 82 aa2.93□□□□□ -1.94
GCFC2-202ENST00000409857 KRTAP4-4Q9BYR3 166 aa2.92□□□□□ -1.94
GCFC2-202ENST00000409857 KRTAP21-1Q3LI58 79 aa2.89□□□□□ -1.95
GCFC2-202ENST00000409857 MUC19Q7Z5P9 8384 aa2.86□□□□□ -1.95
GCFC2-202ENST00000409857 MUC16Q8WXI7 14507 aa1.85□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 6.2 ms