RNA–Protein interactions for RNA: ENST00000409475.5

PGAP1-204, Transcript of post-GPI attachment to proteins 1, humanhuman

TSL 2 BASIC

Gene PGAP1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP1-204ENST00000409475 KRTAP19-4Q3LI73 84 aa6.97□□□□□ -1.29
PGAP1-204ENST00000409475 MUC12Q9UKN1 5478 aa6.96□□□□□ -1.3
PGAP1-204ENST00000409475 LCE1AQ5T7P2 110 aa6.96□□□□□ -1.3
PGAP1-204ENST00000409475 SPRR2EP22531 72 aa6.92□□□□□ -1.3
PGAP1-204ENST00000409475 SPRR2BP35325 72 aa6.92□□□□□ -1.3
PGAP1-204ENST00000409475 SPRR2AP35326 72 aa6.92□□□□□ -1.3
PGAP1-204ENST00000409475 MT1GP13640 62 aa6.91□□□□□ -1.3
PGAP1-204ENST00000409475 LCE5AQ5TCM9 118 aa6.89□□□□□ -1.31
PGAP1-204ENST00000409475 MDN1Q9NU22 5596 aa6.81□□□□□ -1.32
PGAP1-204ENST00000409475 MT1MQ8N339 61 aa6.8□□□□□ -1.32
PGAP1-204ENST00000409475 LCE3CQ5T5A8 94 aa6.8□□□□□ -1.32
PGAP1-204ENST00000409475 NEBP20929 6669 aa6.74□□□□□ -1.33
PGAP1-204ENST00000409475 KRTAP4-7Q9BYR0 210 aa6.69□□□□□ -1.34
PGAP1-204ENST00000409475 SPRR2DP22532 72 aa6.68□□□□□ -1.34
PGAP1-204ENST00000409475 KRTAP4-3Q9BYR4 195 aa6.59□□□□□ -1.35
PGAP1-204ENST00000409475 SPRR5A0A1B0GTR4 108 aa6.58□□□□□ -1.36
PGAP1-204ENST00000409475 LCE3BQ5TA77 95 aa6.44□□□□□ -1.38
PGAP1-204ENST00000409475 KRTAP2-3P0C7H8 128 aa6.39□□□□□ -1.39
PGAP1-204ENST00000409475 KRTAP2-4Q9BYR9 128 aa6.39□□□□□ -1.39
PGAP1-204ENST00000409475 KRTAP9-6A8MVA2 160 aa6.38□□□□□ -1.39
PGAP1-204ENST00000409475 KRTAP20-1Q3LI63 56 aa6.33□□□□□ -1.4
PGAP1-204ENST00000409475 LOC100996750A0A140TA64 210 aa6.3□□□□□ -1.4
PGAP1-204ENST00000409475 DSTQ03001 7570 aaKnown RBP6.29□□□□□ -1.4
PGAP1-204ENST00000409475 KRTAP2-2Q9BYT5 123 aa6.24□□□□□ -1.41
PGAP1-204ENST00000409475 KRTAP2-1Q9BYU5 128 aa6.24□□□□□ -1.41
PGAP1-204ENST00000409475 KRTAP5-5Q701N2 237 aaPredicted RBP6.18□□□□□ -1.42
PGAP1-204ENST00000409475 LUZP6Q538Z0 58 aa6.18□□□□□ -1.42
PGAP1-204ENST00000409475 KRTAP5-4Q6L8H1 288 aa6.04□□□□□ -1.44
PGAP1-204ENST00000409475 MT1AP04731 61 aa6□□□□□ -1.45
PGAP1-204ENST00000409475 LCE4AQ5TA78 99 aa5.99□□□□□ -1.45
PGAP1-204ENST00000409475 KRTAP6-1Q3LI64 71 aa5.9□□□□□ -1.47
PGAP1-204ENST00000409475 NDUFAF8A1L188 74 aa5.8□□□□□ -1.48
PGAP1-204ENST00000409475 KRTAP12-4P60329 112 aa5.79□□□□□ -1.48
PGAP1-204ENST00000409475 MT4P47944 62 aa5.76□□□□□ -1.49
PGAP1-204ENST00000409475 KRTAP4-9Q9BYQ8 210 aa5.75□□□□□ -1.49
PGAP1-204ENST00000409475 LCE1DQ5T752 114 aa5.74□□□□□ -1.49
PGAP1-204ENST00000409475 KRTAP9-4Q9BYQ2 154 aa5.71□□□□□ -1.5
PGAP1-204ENST00000409475 SYNE1Q8NF91 8797 aaKnown RBP5.71□□□□□ -1.5
PGAP1-204ENST00000409475 KRTAP4-6Q9BYQ5 205 aa5.7□□□□□ -1.5
PGAP1-204ENST00000409475 KRTAP20-2Q3LI61 65 aa5.62□□□□□ -1.51
PGAP1-204ENST00000409475 HMCN1Q96RW7 5635 aa5.57□□□□□ -1.52
PGAP1-204ENST00000409475 KRTAP6-2Q3LI66 62 aa5.47□□□□□ -1.53
PGAP1-204ENST00000409475 MT3P25713 68 aa5.44□□□□□ -1.54
PGAP1-204ENST00000409475 KRTAP5-3Q6L8H2 238 aa5.44□□□□□ -1.54
PGAP1-204ENST00000409475 KRTAP5-2Q701N4 177 aa5.44□□□□□ -1.54
PGAP1-204ENST00000409475 AHNAK2Q8IVF2 5795 aa5.09□□□□□ -1.59
PGAP1-204ENST00000409475 A0A0A0MQY5 61 aa5.07□□□□□ -1.6
PGAP1-204ENST00000409475 LCE3DQ9BYE3 92 aa5.05□□□□□ -1.6
PGAP1-204ENST00000409475 KRTAP5-10Q6L8G5 202 aa4.93□□□□□ -1.62
PGAP1-204ENST00000409475 KRTAP4-11Q9BYQ6 195 aa4.92□□□□□ -1.62
PGAP1-204ENST00000409475 LCE3EQ5T5B0 92 aa4.89□□□□□ -1.63
PGAP1-204ENST00000409475 INE1O15225 51 aa4.86□□□□□ -1.63
PGAP1-204ENST00000409475 OBSCNQ5VST9 7968 aa4.86□□□□□ -1.63
PGAP1-204ENST00000409475 LCE1EQ5T753 118 aa4.82□□□□□ -1.64
PGAP1-204ENST00000409475 GPR98Q8WXG9 6306 aa4.77□□□□□ -1.65
PGAP1-204ENST00000409475 KRTAP5-8O75690 187 aa4.75□□□□□ -1.65
PGAP1-204ENST00000409475 KRTAP5-1Q6L8H4 278 aa4.71□□□□□ -1.66
PGAP1-204ENST00000409475 KRTAP5-7Q6L8G8 165 aa4.63□□□□□ -1.67
PGAP1-204ENST00000409475 H3BS24 57 aa4.6□□□□□ -1.67
PGAP1-204ENST00000409475 MUC5ACP98088 5654 aa4.49□□□□□ -1.69
PGAP1-204ENST00000409475 LCE1CQ5T751 118 aa4.47□□□□□ -1.69
PGAP1-204ENST00000409475 LCE1BQ5T7P3 118 aa4.47□□□□□ -1.69
PGAP1-204ENST00000409475 KRTAP4-2Q9BYR5 136 aa4.46□□□□□ -1.69
PGAP1-204ENST00000409475 KRTAP9-9Q9BYP9 154 aa4.34□□□□□ -1.72
PGAP1-204ENST00000409475 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.19□□□□□ -1.74
PGAP1-204ENST00000409475 PRM1P04553 51 aa4.12□□□□□ -1.75
PGAP1-204ENST00000409475 MUC5BQ9HC84 5762 aaPredicted RBP4.11□□□□□ -1.75
PGAP1-204ENST00000409475 KRTAP4-12Q9BQ66 201 aa4.04□□□□□ -1.76
PGAP1-204ENST00000409475 KRTAP5-11Q6L8G4 156 aa3.97□□□□□ -1.77
PGAP1-204ENST00000409475 AHNAKQ09666 5890 aaKnown RBP3.94□□□□□ -1.78
PGAP1-204ENST00000409475 KRTAP21-2Q3LI59 83 aa3.89□□□□□ -1.79
PGAP1-204ENST00000409475 LCE1FQ5T754 118 aa3.68□□□□□ -1.82
PGAP1-204ENST00000409475 PHGR1C9JFL3 82 aa3.4□□□□□ -1.86
PGAP1-204ENST00000409475 KRTAP4-4Q9BYR3 166 aa3.4□□□□□ -1.87
PGAP1-204ENST00000409475 MUC19Q7Z5P9 8384 aa2.85□□□□□ -1.95
PGAP1-204ENST00000409475 KRTAP21-1Q3LI58 79 aa2.51□□□□□ -2.01
PGAP1-204ENST00000409475 MUC16Q8WXI7 14507 aa2.18□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 143.4 ms