RNA–Protein interactions for RNA: ENST00000409298.5

GTDC1-207, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 5 BASIC

Gene GTDC1, Length 2,209 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-207ENST00000409298 KRTAP2-2Q9BYT5 123 aa2.35□□□□□ -2.03
GTDC1-207ENST00000409298 MT1HL1P0DM35 61 aa2.33□□□□□ -2.04
GTDC1-207ENST00000409298 MUC17Q685J3 4493 aa2.3□□□□□ -2.04
GTDC1-207ENST00000409298 KRTAP10-7P60409 375 aaPredicted RBP2.28□□□□□ -2.04
GTDC1-207ENST00000409298 KRTAP10-5P60370 271 aa2.27□□□□□ -2.05
GTDC1-207ENST00000409298 KRTAP2-3P0C7H8 128 aa2.25□□□□□ -2.05
GTDC1-207ENST00000409298 KRTAP12-3P60328 96 aa2.25□□□□□ -2.05
GTDC1-207ENST00000409298 KRTAP2-4Q9BYR9 128 aa2.25□□□□□ -2.05
GTDC1-207ENST00000409298 KRTAP2-1Q9BYU5 128 aa2.25□□□□□ -2.05
GTDC1-207ENST00000409298 MT3P25713 68 aa2.23□□□□□ -2.05
GTDC1-207ENST00000409298 KRTAP19-2Q3LHN2 52 aa2.23□□□□□ -2.05
GTDC1-207ENST00000409298 LCE1EQ5T753 118 aa2.21□□□□□ -2.06
GTDC1-207ENST00000409298 FSIP2Q5CZC0 6907 aa2.2□□□□□ -2.06
GTDC1-207ENST00000409298 SSPOA2VEC9 5147 aa2.2□□□□□ -2.06
GTDC1-207ENST00000409298 SPRR2GQ9BYE4 73 aa2.16□□□□□ -2.06
GTDC1-207ENST00000409298 KRTAP4-1Q9BYQ7 146 aa2.16□□□□□ -2.06
GTDC1-207ENST00000409298 KRTAP4-3Q9BYR4 195 aa2.16□□□□□ -2.06
GTDC1-207ENST00000409298 LCE3CQ5T5A8 94 aa2.15□□□□□ -2.06
GTDC1-207ENST00000409298 KRTAP9-6A8MVA2 160 aa2.15□□□□□ -2.07
GTDC1-207ENST00000409298 MUC5BQ9HC84 5762 aaPredicted RBP2.11□□□□□ -2.07
GTDC1-207ENST00000409298 OBSCNQ5VST9 7968 aa2.11□□□□□ -2.07
GTDC1-207ENST00000409298 KRTAP6-3Q3LI67 103 aa2.1□□□□□ -2.07
GTDC1-207ENST00000409298 M0R2T5 61 aa2.09□□□□□ -2.07
GTDC1-207ENST00000409298 KRTAP20-1Q3LI63 56 aa2.07□□□□□ -2.08
GTDC1-207ENST00000409298 KRTAP12-4P60329 112 aa2.06□□□□□ -2.08
GTDC1-207ENST00000409298 KRTAP5-5Q701N2 237 aaPredicted RBP2.06□□□□□ -2.08
GTDC1-207ENST00000409298 NEBP20929 6669 aa2.05□□□□□ -2.08
GTDC1-207ENST00000409298 KRTAP19-5Q3LI72 72 aa2.05□□□□□ -2.08
GTDC1-207ENST00000409298 MT1XP80297 61 aa2.04□□□□□ -2.08
GTDC1-207ENST00000409298 FCGBPQ9Y6R7 5405 aaPredicted RBP2.03□□□□□ -2.08
GTDC1-207ENST00000409298 USH2AO75445 5202 aa2.02□□□□□ -2.09
GTDC1-207ENST00000409298 LCE1FQ5T754 118 aa2.02□□□□□ -2.09
GTDC1-207ENST00000409298 MT1HP80294 61 aa2.01□□□□□ -2.09
GTDC1-207ENST00000409298 SYNE2Q8WXH0 6885 aaKnown RBP2□□□□□ -2.09
GTDC1-207ENST00000409298 KRTAP19-8Q3LI54 63 aa1.99□□□□□ -2.09
GTDC1-207ENST00000409298 MACF1Q9UPN3 7388 aaKnown RBP1.98□□□□□ -2.09
GTDC1-207ENST00000409298 GPR98Q8WXG9 6306 aa1.94□□□□□ -2.1
GTDC1-207ENST00000409298 MT1BP07438 61 aa1.94□□□□□ -2.1
GTDC1-207ENST00000409298 KRTAP19-6Q3LI70 58 aa1.93□□□□□ -2.1
GTDC1-207ENST00000409298 MT1FP04733 61 aa1.89□□□□□ -2.11
GTDC1-207ENST00000409298 PRM1P04553 51 aa1.89□□□□□ -2.11
GTDC1-207ENST00000409298 MT2AP02795 61 aa1.87□□□□□ -2.11
GTDC1-207ENST00000409298 KRTAP19-7Q3SYF9 63 aa1.82□□□□□ -2.12
GTDC1-207ENST00000409298 SYNE1Q8NF91 8797 aaKnown RBP1.82□□□□□ -2.12
GTDC1-207ENST00000409298 KMT2DO14686 5537 aa1.8□□□□□ -2.12
GTDC1-207ENST00000409298 MUC12Q9UKN1 5478 aa1.8□□□□□ -2.12
GTDC1-207ENST00000409298 MDN1Q9NU22 5596 aa1.79□□□□□ -2.12
GTDC1-207ENST00000409298 MT1LQ93083 61 aa1.79□□□□□ -2.12
GTDC1-207ENST00000409298 MT1EP04732 61 aa1.76□□□□□ -2.13
GTDC1-207ENST00000409298 MT1AP04731 61 aa1.76□□□□□ -2.13
GTDC1-207ENST00000409298 LCE3EQ5T5B0 92 aa1.75□□□□□ -2.13
GTDC1-207ENST00000409298 LCE3DQ9BYE3 92 aa1.72□□□□□ -2.13
GTDC1-207ENST00000409298 MT1GP13640 62 aa1.7□□□□□ -2.14
GTDC1-207ENST00000409298 SPRR2EP22531 72 aa1.7□□□□□ -2.14
GTDC1-207ENST00000409298 SPRR2BP35325 72 aa1.7□□□□□ -2.14
GTDC1-207ENST00000409298 SPRR2AP35326 72 aa1.7□□□□□ -2.14
GTDC1-207ENST00000409298 KRTAP6-2Q3LI66 62 aa1.68□□□□□ -2.14
GTDC1-207ENST00000409298 KRTAP5-7Q6L8G8 165 aa1.67□□□□□ -2.14
GTDC1-207ENST00000409298 SPRR2DP22532 72 aa1.66□□□□□ -2.14
GTDC1-207ENST00000409298 AHNAK2Q8IVF2 5795 aa1.64□□□□□ -2.15
GTDC1-207ENST00000409298 KRTAP5-10Q6L8G5 202 aa1.63□□□□□ -2.15
GTDC1-207ENST00000409298 SPRR2FQ96RM1 72 aa1.62□□□□□ -2.15
GTDC1-207ENST00000409298 AHNAKQ09666 5890 aaKnown RBP1.61□□□□□ -2.15
GTDC1-207ENST00000409298 MT1MQ8N339 61 aa1.58□□□□□ -2.16
GTDC1-207ENST00000409298 KRTAP6-1Q3LI64 71 aa1.53□□□□□ -2.16
GTDC1-207ENST00000409298 DSTQ03001 7570 aaKnown RBP1.51□□□□□ -2.17
GTDC1-207ENST00000409298 KRTAP19-3Q7Z4W3 81 aa1.5□□□□□ -2.17
GTDC1-207ENST00000409298 LCE1CQ5T751 118 aa1.44□□□□□ -2.18
GTDC1-207ENST00000409298 LCE1BQ5T7P3 118 aa1.44□□□□□ -2.18
GTDC1-207ENST00000409298 MUC5ACP98088 5654 aa1.42□□□□□ -2.18
GTDC1-207ENST00000409298 MT4P47944 62 aa1.41□□□□□ -2.18
GTDC1-207ENST00000409298 MUC19Q7Z5P9 8384 aa1.3□□□□□ -2.2
GTDC1-207ENST00000409298 KRTAP20-2Q3LI61 65 aa1.3□□□□□ -2.2
GTDC1-207ENST00000409298 KRTAP21-1Q3LI58 79 aa1.27□□□□□ -2.21
GTDC1-207ENST00000409298 KRTAP21-2Q3LI59 83 aa1.03□□□□□ -2.24
GTDC1-207ENST00000409298 PHGR1C9JFL3 82 aa0.95□□□□□ -2.26
GTDC1-207ENST00000409298 MUC16Q8WXI7 14507 aa0.62□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 11 ms