RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 LCE1AQ5T7P2 110 aa7.31□□□□□ -1.24
CHKB-201ENST00000406938 MT1LQ93083 61 aa7.31□□□□□ -1.24
CHKB-201ENST00000406938 SPRR2EP22531 72 aa7.3□□□□□ -1.24
CHKB-201ENST00000406938 SPRR2BP35325 72 aa7.3□□□□□ -1.24
CHKB-201ENST00000406938 SPRR2AP35326 72 aa7.3□□□□□ -1.24
CHKB-201ENST00000406938 KRTAP19-3Q7Z4W3 81 aa7.29□□□□□ -1.24
CHKB-201ENST00000406938 LCE5AQ5TCM9 118 aa7.19□□□□□ -1.26
CHKB-201ENST00000406938 MT1GP13640 62 aa7.17□□□□□ -1.26
CHKB-201ENST00000406938 NEBP20929 6669 aa7.16□□□□□ -1.26
CHKB-201ENST00000406938 MT1MQ8N339 61 aa7.1□□□□□ -1.27
CHKB-201ENST00000406938 KRTAP19-4Q3LI73 84 aa7.07□□□□□ -1.28
CHKB-201ENST00000406938 LUZP6Q538Z0 58 aa7.07□□□□□ -1.28
CHKB-201ENST00000406938 SPRR2DP22532 72 aa7.05□□□□□ -1.28
CHKB-201ENST00000406938 KRTAP4-7Q9BYR0 210 aa7.05□□□□□ -1.28
CHKB-201ENST00000406938 LCE3CQ5T5A8 94 aa7.03□□□□□ -1.28
CHKB-201ENST00000406938 NDUFAF8A1L188 74 aa7.02□□□□□ -1.29
CHKB-201ENST00000406938 SPRR5A0A1B0GTR4 108 aa7□□□□□ -1.29
CHKB-201ENST00000406938 KRTAP4-3Q9BYR4 195 aa6.94□□□□□ -1.3
CHKB-201ENST00000406938 H3BS24 57 aa6.87□□□□□ -1.31
CHKB-201ENST00000406938 DSTQ03001 7570 aaKnown RBP6.81□□□□□ -1.32
CHKB-201ENST00000406938 LCE3BQ5TA77 95 aa6.78□□□□□ -1.32
CHKB-201ENST00000406938 KRTAP2-3P0C7H8 128 aa6.72□□□□□ -1.33
CHKB-201ENST00000406938 KRTAP2-4Q9BYR9 128 aa6.72□□□□□ -1.33
CHKB-201ENST00000406938 KRTAP20-1Q3LI63 56 aa6.71□□□□□ -1.34
CHKB-201ENST00000406938 KRTAP9-6A8MVA2 160 aa6.65□□□□□ -1.34
CHKB-201ENST00000406938 LOC100996750A0A140TA64 210 aa6.63□□□□□ -1.35
CHKB-201ENST00000406938 KRTAP2-2Q9BYT5 123 aa6.55□□□□□ -1.36
CHKB-201ENST00000406938 KRTAP2-1Q9BYU5 128 aa6.55□□□□□ -1.36
CHKB-201ENST00000406938 A0A0A0MQY5 61 aa6.47□□□□□ -1.37
CHKB-201ENST00000406938 KRTAP5-5Q701N2 237 aaPredicted RBP6.44□□□□□ -1.38
CHKB-201ENST00000406938 KRTAP5-4Q6L8H1 288 aa6.28□□□□□ -1.4
CHKB-201ENST00000406938 LCE4AQ5TA78 99 aa6.23□□□□□ -1.41
CHKB-201ENST00000406938 MT1AP04731 61 aa6.22□□□□□ -1.41
CHKB-201ENST00000406938 KRTAP6-1Q3LI64 71 aa6.17□□□□□ -1.42
CHKB-201ENST00000406938 KRTAP4-9Q9BYQ8 210 aa6.14□□□□□ -1.43
CHKB-201ENST00000406938 MT4P47944 62 aa6.12□□□□□ -1.43
CHKB-201ENST00000406938 LCE1DQ5T752 114 aa6.07□□□□□ -1.44
CHKB-201ENST00000406938 KRTAP12-4P60329 112 aa6.04□□□□□ -1.44
CHKB-201ENST00000406938 KRTAP4-6Q9BYQ5 205 aa6.03□□□□□ -1.44
CHKB-201ENST00000406938 SYNE1Q8NF91 8797 aaKnown RBP6.03□□□□□ -1.44
CHKB-201ENST00000406938 INE1O15225 51 aa6□□□□□ -1.45
CHKB-201ENST00000406938 HMCN1Q96RW7 5635 aa5.99□□□□□ -1.45
CHKB-201ENST00000406938 KRTAP9-4Q9BYQ2 154 aa5.92□□□□□ -1.46
CHKB-201ENST00000406938 KRTAP20-2Q3LI61 65 aa5.9□□□□□ -1.46
CHKB-201ENST00000406938 KRTAP6-2Q3LI66 62 aa5.74□□□□□ -1.49
CHKB-201ENST00000406938 KRTAP5-3Q6L8H2 238 aa5.69□□□□□ -1.5
CHKB-201ENST00000406938 KRTAP5-2Q701N4 177 aa5.65□□□□□ -1.51
CHKB-201ENST00000406938 MT3P25713 68 aa5.64□□□□□ -1.51
CHKB-201ENST00000406938 AHNAK2Q8IVF2 5795 aa5.42□□□□□ -1.54
CHKB-201ENST00000406938 GPR98Q8WXG9 6306 aa5.25□□□□□ -1.57
CHKB-201ENST00000406938 OBSCNQ5VST9 7968 aa5.23□□□□□ -1.57
CHKB-201ENST00000406938 KRTAP5-10Q6L8G5 202 aa5.22□□□□□ -1.57
CHKB-201ENST00000406938 LCE3DQ9BYE3 92 aa5.22□□□□□ -1.57
CHKB-201ENST00000406938 KRTAP4-11Q9BYQ6 195 aa5.19□□□□□ -1.58
CHKB-201ENST00000406938 LCE3EQ5T5B0 92 aa5.04□□□□□ -1.6
CHKB-201ENST00000406938 KRTAP5-8O75690 187 aa5□□□□□ -1.61
CHKB-201ENST00000406938 LCE1EQ5T753 118 aa4.97□□□□□ -1.61
CHKB-201ENST00000406938 KRTAP5-1Q6L8H4 278 aa4.94□□□□□ -1.62
CHKB-201ENST00000406938 KRTAP5-7Q6L8G8 165 aa4.89□□□□□ -1.63
CHKB-201ENST00000406938 MUC5ACP98088 5654 aa4.73□□□□□ -1.65
CHKB-201ENST00000406938 LCE1BQ5T7P3 118 aa4.68□□□□□ -1.66
CHKB-201ENST00000406938 KRTAP4-2Q9BYR5 136 aa4.67□□□□□ -1.66
CHKB-201ENST00000406938 LCE1CQ5T751 118 aa4.64□□□□□ -1.67
CHKB-201ENST00000406938 KRTAP9-9Q9BYP9 154 aa4.57□□□□□ -1.68
CHKB-201ENST00000406938 MUC5BQ9HC84 5762 aaPredicted RBP4.38□□□□□ -1.71
CHKB-201ENST00000406938 PRM1P04553 51 aa4.38□□□□□ -1.71
CHKB-201ENST00000406938 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.31□□□□□ -1.72
CHKB-201ENST00000406938 AHNAKQ09666 5890 aaKnown RBP4.19□□□□□ -1.74
CHKB-201ENST00000406938 KRTAP5-11Q6L8G4 156 aa4.13□□□□□ -1.75
CHKB-201ENST00000406938 KRTAP21-2Q3LI59 83 aa4.04□□□□□ -1.76
CHKB-201ENST00000406938 KRTAP4-12Q9BQ66 201 aa3.96□□□□□ -1.78
CHKB-201ENST00000406938 LCE1FQ5T754 118 aa3.79□□□□□ -1.8
CHKB-201ENST00000406938 KRTAP4-4Q9BYR3 166 aa3.62□□□□□ -1.83
CHKB-201ENST00000406938 PHGR1C9JFL3 82 aa3.55□□□□□ -1.84
CHKB-201ENST00000406938 MUC19Q7Z5P9 8384 aa3.14□□□□□ -1.91
CHKB-201ENST00000406938 KRTAP21-1Q3LI58 79 aa2.8□□□□□ -1.96
CHKB-201ENST00000406938 MUC16Q8WXI7 14507 aa2.21□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 79.4 ms