RNA–Protein interactions for RNA: ENST00000406477.7

PARVB-204, Transcript of parvin beta, humanhuman

TSL 1 (best) BASIC

Gene PARVB, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-204ENST00000406477 MT1EP04732 61 aa5.82□□□□□ -1.48
PARVB-204ENST00000406477 LCE3CQ5T5A8 94 aa5.81□□□□□ -1.48
PARVB-204ENST00000406477 KMT2DO14686 5537 aa5.79□□□□□ -1.48
PARVB-204ENST00000406477 MT1LQ93083 61 aa5.74□□□□□ -1.49
PARVB-204ENST00000406477 KRTAP6-3Q3LI67 103 aa5.7□□□□□ -1.5
PARVB-204ENST00000406477 NEBP20929 6669 aa5.61□□□□□ -1.51
PARVB-204ENST00000406477 KRTAP19-3Q7Z4W3 81 aa5.57□□□□□ -1.52
PARVB-204ENST00000406477 MT1GP13640 62 aa5.56□□□□□ -1.52
PARVB-204ENST00000406477 SPRR2FQ96RM1 72 aa5.55□□□□□ -1.52
PARVB-204ENST00000406477 MUC12Q9UKN1 5478 aa5.52□□□□□ -1.53
PARVB-204ENST00000406477 KRTAP4-7Q9BYR0 210 aa5.51□□□□□ -1.53
PARVB-204ENST00000406477 MT1MQ8N339 61 aa5.46□□□□□ -1.53
PARVB-204ENST00000406477 A0A0A0MQY5 61 aa5.43□□□□□ -1.54
PARVB-204ENST00000406477 KRTAP9-6A8MVA2 160 aa5.42□□□□□ -1.54
PARVB-204ENST00000406477 KRTAP5-9P26371 169 aa5.42□□□□□ -1.54
PARVB-204ENST00000406477 LCE5AQ5TCM9 118 aa5.42□□□□□ -1.54
PARVB-204ENST00000406477 KRTAP20-1Q3LI63 56 aa5.4□□□□□ -1.55
PARVB-204ENST00000406477 MDN1Q9NU22 5596 aa5.35□□□□□ -1.55
PARVB-204ENST00000406477 KRTAP4-12Q9BQ66 201 aa5.31□□□□□ -1.56
PARVB-204ENST00000406477 KRTAP4-3Q9BYR4 195 aa5.3□□□□□ -1.56
PARVB-204ENST00000406477 LCE1AQ5T7P2 110 aa5.26□□□□□ -1.57
PARVB-204ENST00000406477 LCE3BQ5TA77 95 aa5.23□□□□□ -1.57
PARVB-204ENST00000406477 SPRR2EP22531 72 aa5.22□□□□□ -1.57
PARVB-204ENST00000406477 SPRR2BP35325 72 aa5.22□□□□□ -1.57
PARVB-204ENST00000406477 SPRR2AP35326 72 aa5.22□□□□□ -1.57
PARVB-204ENST00000406477 KRTAP2-3P0C7H8 128 aa5.19□□□□□ -1.58
PARVB-204ENST00000406477 KRTAP2-4Q9BYR9 128 aa5.19□□□□□ -1.58
PARVB-204ENST00000406477 KRTAP2-1Q9BYU5 128 aa5.18□□□□□ -1.58
PARVB-204ENST00000406477 KRTAP9-9Q9BYP9 154 aa5.13□□□□□ -1.59
PARVB-204ENST00000406477 KRTAP9-4Q9BYQ2 154 aa5.13□□□□□ -1.59
PARVB-204ENST00000406477 INE1O15225 51 aa5.03□□□□□ -1.6
PARVB-204ENST00000406477 SPRR2DP22532 72 aa5.03□□□□□ -1.6
PARVB-204ENST00000406477 KRTAP2-2Q9BYT5 123 aa5□□□□□ -1.61
PARVB-204ENST00000406477 LCE4AQ5TA78 99 aa4.91□□□□□ -1.62
PARVB-204ENST00000406477 MT1AP04731 61 aa4.9□□□□□ -1.63
PARVB-204ENST00000406477 LCE1DQ5T752 114 aa4.9□□□□□ -1.63
PARVB-204ENST00000406477 KRTAP5-5Q701N2 237 aaPredicted RBP4.89□□□□□ -1.63
PARVB-204ENST00000406477 DSTQ03001 7570 aaKnown RBP4.86□□□□□ -1.63
PARVB-204ENST00000406477 KRTAP6-1Q3LI64 71 aa4.81□□□□□ -1.64
PARVB-204ENST00000406477 GPR98Q8WXG9 6306 aa4.8□□□□□ -1.64
PARVB-204ENST00000406477 KRTAP4-9Q9BYQ8 210 aa4.74□□□□□ -1.65
PARVB-204ENST00000406477 KRTAP4-2Q9BYR5 136 aa4.62□□□□□ -1.67
PARVB-204ENST00000406477 KRTAP4-11Q9BYQ6 195 aa4.6□□□□□ -1.67
PARVB-204ENST00000406477 KRTAP5-4Q6L8H1 288 aa4.58□□□□□ -1.68
PARVB-204ENST00000406477 KRTAP12-4P60329 112 aa4.56□□□□□ -1.68
PARVB-204ENST00000406477 SYNE1Q8NF91 8797 aaKnown RBP4.55□□□□□ -1.68
PARVB-204ENST00000406477 MT3P25713 68 aa4.45□□□□□ -1.7
PARVB-204ENST00000406477 HMCN1Q96RW7 5635 aa4.45□□□□□ -1.7
PARVB-204ENST00000406477 LCE3DQ9BYE3 92 aa4.41□□□□□ -1.7
PARVB-204ENST00000406477 KRTAP6-2Q3LI66 62 aa4.4□□□□□ -1.71
PARVB-204ENST00000406477 AHNAK2Q8IVF2 5795 aa4.37□□□□□ -1.71
PARVB-204ENST00000406477 LCE3EQ5T5B0 92 aa4.33□□□□□ -1.72
PARVB-204ENST00000406477 MT4P47944 62 aa4.32□□□□□ -1.72
PARVB-204ENST00000406477 KRTAP20-2Q3LI61 65 aa4.27□□□□□ -1.73
PARVB-204ENST00000406477 KRTAP5-10Q6L8G5 202 aa4.26□□□□□ -1.73
PARVB-204ENST00000406477 KRTAP5-2Q701N4 177 aa4.19□□□□□ -1.74
PARVB-204ENST00000406477 KRTAP5-7Q6L8G8 165 aa4.13□□□□□ -1.75
PARVB-204ENST00000406477 KRTAP5-3Q6L8H2 238 aa4.1□□□□□ -1.75
PARVB-204ENST00000406477 OBSCNQ5VST9 7968 aa3.92□□□□□ -1.78
PARVB-204ENST00000406477 PRM1P04553 51 aa3.84□□□□□ -1.8
PARVB-204ENST00000406477 LCE1EQ5T753 118 aa3.82□□□□□ -1.8
PARVB-204ENST00000406477 AHNAKQ09666 5890 aaKnown RBP3.72□□□□□ -1.81
PARVB-204ENST00000406477 MUC5ACP98088 5654 aa3.67□□□□□ -1.82
PARVB-204ENST00000406477 MUC5BQ9HC84 5762 aaPredicted RBP3.67□□□□□ -1.82
PARVB-204ENST00000406477 KRTAP5-8O75690 187 aa3.6□□□□□ -1.83
PARVB-204ENST00000406477 KRTAP5-1Q6L8H4 278 aa3.58□□□□□ -1.84
PARVB-204ENST00000406477 LCE1CQ5T751 118 aa3.55□□□□□ -1.84
PARVB-204ENST00000406477 LCE1BQ5T7P3 118 aa3.55□□□□□ -1.84
PARVB-204ENST00000406477 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.34□□□□□ -1.88
PARVB-204ENST00000406477 KRTAP21-2Q3LI59 83 aa3.14□□□□□ -1.91
PARVB-204ENST00000406477 KRTAP5-11Q6L8G4 156 aa3.12□□□□□ -1.91
PARVB-204ENST00000406477 LCE1FQ5T754 118 aa2.83□□□□□ -1.96
PARVB-204ENST00000406477 KRTAP4-4Q9BYR3 166 aa2.74□□□□□ -1.97
PARVB-204ENST00000406477 PHGR1C9JFL3 82 aa2.65□□□□□ -1.99
PARVB-204ENST00000406477 KRTAP21-1Q3LI58 79 aa2.4□□□□□ -2.03
PARVB-204ENST00000406477 MUC19Q7Z5P9 8384 aa2.24□□□□□ -2.05
PARVB-204ENST00000406477 MUC16Q8WXI7 14507 aa1.74□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 285.3 ms