RNA–Protein interactions for RNA: ENST00000405655.7

PRAME-205, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-205ENST00000405655 INE1O15225 51 aa4.98□□□□□ -1.61
PRAME-205ENST00000405655 MT1LQ93083 61 aa4.97□□□□□ -1.61
PRAME-205ENST00000405655 SYNE2Q8WXH0 6885 aaKnown RBP4.94□□□□□ -1.62
PRAME-205ENST00000405655 KRTAP9-6A8MVA2 160 aa4.91□□□□□ -1.62
PRAME-205ENST00000405655 KRTAP19-4Q3LI73 84 aa4.91□□□□□ -1.62
PRAME-205ENST00000405655 KRTAP4-3Q9BYR4 195 aa4.89□□□□□ -1.63
PRAME-205ENST00000405655 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.89□□□□□ -1.63
PRAME-205ENST00000405655 SPRR2FQ96RM1 72 aa4.87□□□□□ -1.63
PRAME-205ENST00000405655 KRTAP9-7A8MTY7 169 aa4.81□□□□□ -1.64
PRAME-205ENST00000405655 MDN1Q9NU22 5596 aa4.81□□□□□ -1.64
PRAME-205ENST00000405655 DSTQ03001 7570 aaKnown RBP4.79□□□□□ -1.64
PRAME-205ENST00000405655 LOC100996750A0A140TA64 210 aa4.76□□□□□ -1.65
PRAME-205ENST00000405655 KRTAP19-3Q7Z4W3 81 aa4.76□□□□□ -1.65
PRAME-205ENST00000405655 MT1MQ8N339 61 aa4.74□□□□□ -1.65
PRAME-205ENST00000405655 MT1GP13640 62 aa4.68□□□□□ -1.66
PRAME-205ENST00000405655 LCE5AQ5TCM9 118 aa4.67□□□□□ -1.66
PRAME-205ENST00000405655 KRTAP5-9P26371 169 aa4.66□□□□□ -1.66
PRAME-205ENST00000405655 LCE1AQ5T7P2 110 aa4.59□□□□□ -1.67
PRAME-205ENST00000405655 KRTAP6-3Q3LI67 103 aa4.58□□□□□ -1.68
PRAME-205ENST00000405655 SPRR2EP22531 72 aa4.53□□□□□ -1.68
PRAME-205ENST00000405655 SPRR2BP35325 72 aa4.53□□□□□ -1.68
PRAME-205ENST00000405655 SPRR2AP35326 72 aa4.53□□□□□ -1.68
PRAME-205ENST00000405655 KRTAP2-3P0C7H8 128 aa4.43□□□□□ -1.7
PRAME-205ENST00000405655 KRTAP2-4Q9BYR9 128 aa4.43□□□□□ -1.7
PRAME-205ENST00000405655 KRTAP2-1Q9BYU5 128 aa4.43□□□□□ -1.7
PRAME-205ENST00000405655 SPRR2DP22532 72 aa4.33□□□□□ -1.72
PRAME-205ENST00000405655 SYNE1Q8NF91 8797 aaKnown RBP4.29□□□□□ -1.72
PRAME-205ENST00000405655 NEBP20929 6669 aa4.29□□□□□ -1.72
PRAME-205ENST00000405655 KRTAP6-1Q3LI64 71 aa4.27□□□□□ -1.73
PRAME-205ENST00000405655 KRTAP20-1Q3LI63 56 aa4.24□□□□□ -1.73
PRAME-205ENST00000405655 LCE3BQ5TA77 95 aa4.22□□□□□ -1.73
PRAME-205ENST00000405655 KRTAP5-5Q701N2 237 aaPredicted RBP4.21□□□□□ -1.73
PRAME-205ENST00000405655 KRTAP4-9Q9BYQ8 210 aa4.16□□□□□ -1.74
PRAME-205ENST00000405655 MT1AP04731 61 aa4.14□□□□□ -1.75
PRAME-205ENST00000405655 KRTAP2-2Q9BYT5 123 aa3.99□□□□□ -1.77
PRAME-205ENST00000405655 KRTAP9-4Q9BYQ2 154 aa3.95□□□□□ -1.78
PRAME-205ENST00000405655 OBSCNQ5VST9 7968 aa3.94□□□□□ -1.78
PRAME-205ENST00000405655 KRTAP5-4Q6L8H1 288 aa3.93□□□□□ -1.78
PRAME-205ENST00000405655 MT4P47944 62 aa3.9□□□□□ -1.79
PRAME-205ENST00000405655 KRTAP4-6Q9BYQ5 205 aa3.9□□□□□ -1.79
PRAME-205ENST00000405655 KRTAP6-2Q3LI66 62 aa3.89□□□□□ -1.79
PRAME-205ENST00000405655 KRTAP12-4P60329 112 aa3.87□□□□□ -1.79
PRAME-205ENST00000405655 LCE4AQ5TA78 99 aa3.85□□□□□ -1.79
PRAME-205ENST00000405655 HMCN1Q96RW7 5635 aa3.77□□□□□ -1.81
PRAME-205ENST00000405655 LCE3DQ9BYE3 92 aa3.76□□□□□ -1.81
PRAME-205ENST00000405655 MT3P25713 68 aa3.72□□□□□ -1.81
PRAME-205ENST00000405655 LCE1DQ5T752 114 aa3.72□□□□□ -1.81
PRAME-205ENST00000405655 KRTAP20-2Q3LI61 65 aa3.69□□□□□ -1.82
PRAME-205ENST00000405655 LCE3EQ5T5B0 92 aa3.66□□□□□ -1.82
PRAME-205ENST00000405655 KRTAP5-2Q701N4 177 aa3.59□□□□□ -1.84
PRAME-205ENST00000405655 KRTAP5-3Q6L8H2 238 aa3.53□□□□□ -1.84
PRAME-205ENST00000405655 GPR98Q8WXG9 6306 aa3.42□□□□□ -1.86
PRAME-205ENST00000405655 PRM1P04553 51 aa3.39□□□□□ -1.87
PRAME-205ENST00000405655 AHNAK2Q8IVF2 5795 aa3.33□□□□□ -1.88
PRAME-205ENST00000405655 KRTAP5-10Q6L8G5 202 aa3.31□□□□□ -1.88
PRAME-205ENST00000405655 LCE1EQ5T753 118 aa3.22□□□□□ -1.89
PRAME-205ENST00000405655 MUC5ACP98088 5654 aa3.21□□□□□ -1.9
PRAME-205ENST00000405655 KRTAP5-7Q6L8G8 165 aa3.19□□□□□ -1.9
PRAME-205ENST00000405655 LCE1BQ5T7P3 118 aa3.18□□□□□ -1.9
PRAME-205ENST00000405655 KRTAP4-11Q9BYQ6 195 aa3.15□□□□□ -1.9
PRAME-205ENST00000405655 KRTAP5-1Q6L8H4 278 aa3.11□□□□□ -1.91
PRAME-205ENST00000405655 KRTAP5-8O75690 187 aa3.04□□□□□ -1.92
PRAME-205ENST00000405655 KRTAP4-2Q9BYR5 136 aa3.04□□□□□ -1.92
PRAME-205ENST00000405655 LCE1CQ5T751 118 aa3□□□□□ -1.93
PRAME-205ENST00000405655 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.83□□□□□ -1.96
PRAME-205ENST00000405655 MUC5BQ9HC84 5762 aaPredicted RBP2.81□□□□□ -1.96
PRAME-205ENST00000405655 KRTAP9-9Q9BYP9 154 aa2.76□□□□□ -1.97
PRAME-205ENST00000405655 KRTAP21-2Q3LI59 83 aa2.75□□□□□ -1.97
PRAME-205ENST00000405655 KRTAP4-12Q9BQ66 201 aa2.73□□□□□ -1.97
PRAME-205ENST00000405655 AHNAKQ09666 5890 aaKnown RBP2.68□□□□□ -1.98
PRAME-205ENST00000405655 KRTAP5-11Q6L8G4 156 aa2.64□□□□□ -1.99
PRAME-205ENST00000405655 KRTAP4-4Q9BYR3 166 aa2.64□□□□□ -1.99
PRAME-205ENST00000405655 LCE1FQ5T754 118 aa2.42□□□□□ -2.02
PRAME-205ENST00000405655 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
PRAME-205ENST00000405655 PHGR1C9JFL3 82 aa2.25□□□□□ -2.05
PRAME-205ENST00000405655 KRTAP21-1Q3LI58 79 aa2.22□□□□□ -2.05
PRAME-205ENST00000405655 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 49.2 ms