RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 KRTAP9-6A0A140TA67 174 aa5.42□□□□□ -1.54
ATG4B-205ENST00000404914 KRTAP19-7Q3SYF9 63 aa5.41□□□□□ -1.54
ATG4B-205ENST00000404914 MACF1Q9UPN3 7388 aaKnown RBP5.38□□□□□ -1.55
ATG4B-205ENST00000404914 SYNE2Q8WXH0 6885 aaKnown RBP5.28□□□□□ -1.56
ATG4B-205ENST00000404914 MT1LQ93083 61 aa5.25□□□□□ -1.57
ATG4B-205ENST00000404914 MT1EP04732 61 aa5.2□□□□□ -1.58
ATG4B-205ENST00000404914 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.17□□□□□ -1.58
ATG4B-205ENST00000404914 LOC100996750A0A140TA64 210 aa5.15□□□□□ -1.59
ATG4B-205ENST00000404914 KRTAP4-3Q9BYR4 195 aa5.11□□□□□ -1.59
ATG4B-205ENST00000404914 MUC12Q9UKN1 5478 aa5.06□□□□□ -1.6
ATG4B-205ENST00000404914 MT1GP13640 62 aa5□□□□□ -1.61
ATG4B-205ENST00000404914 KRTAP19-4Q3LI73 84 aa4.98□□□□□ -1.61
ATG4B-205ENST00000404914 SPRR2FQ96RM1 72 aa4.96□□□□□ -1.62
ATG4B-205ENST00000404914 MDN1Q9NU22 5596 aa4.95□□□□□ -1.62
ATG4B-205ENST00000404914 KRTAP9-7A8MTY7 169 aa4.94□□□□□ -1.62
ATG4B-205ENST00000404914 KRTAP5-9P26371 169 aa4.93□□□□□ -1.62
ATG4B-205ENST00000404914 KRTAP12-4P60329 112 aa4.92□□□□□ -1.62
ATG4B-205ENST00000404914 KRTAP6-3Q3LI67 103 aa4.91□□□□□ -1.62
ATG4B-205ENST00000404914 DSTQ03001 7570 aaKnown RBP4.88□□□□□ -1.63
ATG4B-205ENST00000404914 MT1MQ8N339 61 aa4.84□□□□□ -1.63
ATG4B-205ENST00000404914 LCE1AQ5T7P2 110 aa4.77□□□□□ -1.65
ATG4B-205ENST00000404914 KRTAP4-9Q9BYQ8 210 aa4.77□□□□□ -1.65
ATG4B-205ENST00000404914 KRTAP19-3Q7Z4W3 81 aa4.76□□□□□ -1.65
ATG4B-205ENST00000404914 SPRR2EP22531 72 aa4.74□□□□□ -1.65
ATG4B-205ENST00000404914 SPRR2BP35325 72 aa4.74□□□□□ -1.65
ATG4B-205ENST00000404914 SPRR2AP35326 72 aa4.74□□□□□ -1.65
ATG4B-205ENST00000404914 SYNE1Q8NF91 8797 aaKnown RBP4.72□□□□□ -1.65
ATG4B-205ENST00000404914 LCE3BQ5TA77 95 aa4.71□□□□□ -1.66
ATG4B-205ENST00000404914 NEBP20929 6669 aa4.7□□□□□ -1.66
ATG4B-205ENST00000404914 LCE5AQ5TCM9 118 aa4.67□□□□□ -1.66
ATG4B-205ENST00000404914 KRTAP2-2Q9BYT5 123 aa4.58□□□□□ -1.68
ATG4B-205ENST00000404914 SPRR2DP22532 72 aa4.55□□□□□ -1.68
ATG4B-205ENST00000404914 KRTAP6-1Q3LI64 71 aa4.52□□□□□ -1.69
ATG4B-205ENST00000404914 KRTAP5-5Q701N2 237 aaPredicted RBP4.47□□□□□ -1.69
ATG4B-205ENST00000404914 MT1AP04731 61 aa4.45□□□□□ -1.7
ATG4B-205ENST00000404914 LCE3DQ9BYE3 92 aa4.43□□□□□ -1.7
ATG4B-205ENST00000404914 PRM1P04553 51 aa4.42□□□□□ -1.7
ATG4B-205ENST00000404914 LCE3EQ5T5B0 92 aa4.38□□□□□ -1.71
ATG4B-205ENST00000404914 KRTAP20-1Q3LI63 56 aa4.33□□□□□ -1.72
ATG4B-205ENST00000404914 OBSCNQ5VST9 7968 aa4.3□□□□□ -1.72
ATG4B-205ENST00000404914 LCE1EQ5T753 118 aa4.28□□□□□ -1.72
ATG4B-205ENST00000404914 KRTAP6-2Q3LI66 62 aa4.2□□□□□ -1.74
ATG4B-205ENST00000404914 LCE1FQ5T754 118 aa4.13□□□□□ -1.75
ATG4B-205ENST00000404914 LCE1DQ5T752 114 aa4.08□□□□□ -1.76
ATG4B-205ENST00000404914 KRTAP5-4Q6L8H1 288 aa4.07□□□□□ -1.76
ATG4B-205ENST00000404914 KRTAP9-4Q9BYQ2 154 aa4.06□□□□□ -1.76
ATG4B-205ENST00000404914 MT4P47944 62 aa4.03□□□□□ -1.76
ATG4B-205ENST00000404914 KRTAP4-6Q9BYQ5 205 aa4□□□□□ -1.77
ATG4B-205ENST00000404914 HMCN1Q96RW7 5635 aa3.97□□□□□ -1.77
ATG4B-205ENST00000404914 LCE4AQ5TA78 99 aa3.97□□□□□ -1.77
ATG4B-205ENST00000404914 MT3P25713 68 aa3.85□□□□□ -1.79
ATG4B-205ENST00000404914 KRTAP20-2Q3LI61 65 aa3.83□□□□□ -1.8
ATG4B-205ENST00000404914 KRTAP5-3Q6L8H2 238 aa3.71□□□□□ -1.82
ATG4B-205ENST00000404914 KRTAP5-2Q701N4 177 aa3.65□□□□□ -1.83
ATG4B-205ENST00000404914 AHNAK2Q8IVF2 5795 aa3.54□□□□□ -1.84
ATG4B-205ENST00000404914 KRTAP9-9Q9BYP9 154 aa3.48□□□□□ -1.85
ATG4B-205ENST00000404914 MUC5ACP98088 5654 aa3.46□□□□□ -1.86
ATG4B-205ENST00000404914 KRTAP5-10Q6L8G5 202 aa3.41□□□□□ -1.86
ATG4B-205ENST00000404914 KRTAP4-11Q9BYQ6 195 aa3.37□□□□□ -1.87
ATG4B-205ENST00000404914 GPR98Q8WXG9 6306 aa3.36□□□□□ -1.87
ATG4B-205ENST00000404914 KRTAP5-8O75690 187 aa3.27□□□□□ -1.89
ATG4B-205ENST00000404914 KRTAP5-1Q6L8H4 278 aa3.23□□□□□ -1.89
ATG4B-205ENST00000404914 LCE1BQ5T7P3 118 aa3.19□□□□□ -1.9
ATG4B-205ENST00000404914 KRTAP5-7Q6L8G8 165 aa3.14□□□□□ -1.91
ATG4B-205ENST00000404914 MUC19Q7Z5P9 8384 aa3.11□□□□□ -1.91
ATG4B-205ENST00000404914 KRTAP4-2Q9BYR5 136 aa3.05□□□□□ -1.92
ATG4B-205ENST00000404914 LCE1CQ5T751 118 aa2.97□□□□□ -1.93
ATG4B-205ENST00000404914 MUC5BQ9HC84 5762 aaPredicted RBP2.92□□□□□ -1.94
ATG4B-205ENST00000404914 KRTAP21-2Q3LI59 83 aa2.88□□□□□ -1.95
ATG4B-205ENST00000404914 KRTAP4-4Q9BYR3 166 aa2.77□□□□□ -1.97
ATG4B-205ENST00000404914 KRTAP21-1Q3LI58 79 aa2.76□□□□□ -1.97
ATG4B-205ENST00000404914 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.75□□□□□ -1.97
ATG4B-205ENST00000404914 AHNAKQ09666 5890 aaKnown RBP2.67□□□□□ -1.98
ATG4B-205ENST00000404914 KRTAP4-12Q9BQ66 201 aa2.66□□□□□ -1.98
ATG4B-205ENST00000404914 KRTAP5-11Q6L8G4 156 aa2.64□□□□□ -1.99
ATG4B-205ENST00000404914 PHGR1C9JFL3 82 aa2.29□□□□□ -2.04
ATG4B-205ENST00000404914 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 285.3 ms