RNA–Protein interactions for RNA: ENST00000403683.1

HIST2H3A-201, Transcript of histone cluster 2 H3 family member a, humanhuman

APPRIS P1 BASIC

Gene HIST2H3A, Length 1,656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3A-201ENST00000403683 KRTAP19-3Q7Z4W3 81 aa8.91□□□□□ -0.98
HIST2H3A-201ENST00000403683 SPRR2EP22531 72 aa8.86□□□□□ -0.99
HIST2H3A-201ENST00000403683 SPRR2BP35325 72 aa8.86□□□□□ -0.99
HIST2H3A-201ENST00000403683 SPRR2AP35326 72 aa8.86□□□□□ -0.99
HIST2H3A-201ENST00000403683 MDN1Q9NU22 5596 aa8.84□□□□□ -0.99
HIST2H3A-201ENST00000403683 LCE1AQ5T7P2 110 aa8.82□□□□□ -1
HIST2H3A-201ENST00000403683 MT1GP13640 62 aa8.81□□□□□ -1
HIST2H3A-201ENST00000403683 KRTAP19-4Q3LI73 84 aa8.78□□□□□ -1
HIST2H3A-201ENST00000403683 LCE3CQ5T5A8 94 aa8.76□□□□□ -1.01
HIST2H3A-201ENST00000403683 LCE5AQ5TCM9 118 aa8.75□□□□□ -1.01
HIST2H3A-201ENST00000403683 NEBP20929 6669 aa8.73□□□□□ -1.01
HIST2H3A-201ENST00000403683 KRTAP4-7Q9BYR0 210 aa8.69□□□□□ -1.02
HIST2H3A-201ENST00000403683 MT1MQ8N339 61 aa8.69□□□□□ -1.02
HIST2H3A-201ENST00000403683 SPRR2DP22532 72 aa8.55□□□□□ -1.04
HIST2H3A-201ENST00000403683 KRTAP4-3Q9BYR4 195 aa8.53□□□□□ -1.04
HIST2H3A-201ENST00000403683 SPRR5A0A1B0GTR4 108 aa8.42□□□□□ -1.06
HIST2H3A-201ENST00000403683 DSTQ03001 7570 aaKnown RBP8.29□□□□□ -1.08
HIST2H3A-201ENST00000403683 KRTAP20-1Q3LI63 56 aa8.24□□□□□ -1.09
HIST2H3A-201ENST00000403683 KRTAP9-6A8MVA2 160 aa8.21□□□□□ -1.09
HIST2H3A-201ENST00000403683 LUZP6Q538Z0 58 aa8.21□□□□□ -1.09
HIST2H3A-201ENST00000403683 LCE3BQ5TA77 95 aa8.21□□□□□ -1.09
HIST2H3A-201ENST00000403683 LOC100996750A0A140TA64 210 aa8.18□□□□□ -1.1
HIST2H3A-201ENST00000403683 KRTAP2-3P0C7H8 128 aa8.1□□□□□ -1.11
HIST2H3A-201ENST00000403683 KRTAP2-4Q9BYR9 128 aa8.1□□□□□ -1.11
HIST2H3A-201ENST00000403683 KRTAP2-2Q9BYT5 123 aa7.88□□□□□ -1.15
HIST2H3A-201ENST00000403683 KRTAP2-1Q9BYU5 128 aa7.88□□□□□ -1.15
HIST2H3A-201ENST00000403683 KRTAP5-5Q701N2 237 aaPredicted RBP7.79□□□□□ -1.16
HIST2H3A-201ENST00000403683 NDUFAF8A1L188 74 aa7.78□□□□□ -1.16
HIST2H3A-201ENST00000403683 MT1AP04731 61 aa7.63□□□□□ -1.19
HIST2H3A-201ENST00000403683 KRTAP6-1Q3LI64 71 aa7.57□□□□□ -1.2
HIST2H3A-201ENST00000403683 KRTAP5-4Q6L8H1 288 aa7.56□□□□□ -1.2
HIST2H3A-201ENST00000403683 LCE4AQ5TA78 99 aa7.54□□□□□ -1.2
HIST2H3A-201ENST00000403683 MT4P47944 62 aa7.44□□□□□ -1.22
HIST2H3A-201ENST00000403683 KRTAP12-4P60329 112 aa7.43□□□□□ -1.22
HIST2H3A-201ENST00000403683 KRTAP4-9Q9BYQ8 210 aa7.41□□□□□ -1.22
HIST2H3A-201ENST00000403683 SYNE1Q8NF91 8797 aaKnown RBP7.37□□□□□ -1.23
HIST2H3A-201ENST00000403683 H3BS24 57 aa7.36□□□□□ -1.23
HIST2H3A-201ENST00000403683 LCE1DQ5T752 114 aa7.3□□□□□ -1.24
HIST2H3A-201ENST00000403683 KRTAP4-6Q9BYQ5 205 aa7.3□□□□□ -1.24
HIST2H3A-201ENST00000403683 KRTAP9-4Q9BYQ2 154 aa7.28□□□□□ -1.24
HIST2H3A-201ENST00000403683 HMCN1Q96RW7 5635 aa7.16□□□□□ -1.26
HIST2H3A-201ENST00000403683 KRTAP20-2Q3LI61 65 aa7.12□□□□□ -1.27
HIST2H3A-201ENST00000403683 KRTAP6-2Q3LI66 62 aa7.04□□□□□ -1.28
HIST2H3A-201ENST00000403683 MT3P25713 68 aa6.96□□□□□ -1.29
HIST2H3A-201ENST00000403683 KRTAP5-3Q6L8H2 238 aa6.83□□□□□ -1.32
HIST2H3A-201ENST00000403683 KRTAP5-2Q701N4 177 aa6.81□□□□□ -1.32
HIST2H3A-201ENST00000403683 A0A0A0MQY5 61 aa6.8□□□□□ -1.32
HIST2H3A-201ENST00000403683 GPR98Q8WXG9 6306 aa6.73□□□□□ -1.33
HIST2H3A-201ENST00000403683 AHNAK2Q8IVF2 5795 aa6.69□□□□□ -1.34
HIST2H3A-201ENST00000403683 LCE3DQ9BYE3 92 aa6.57□□□□□ -1.36
HIST2H3A-201ENST00000403683 KRTAP5-10Q6L8G5 202 aa6.49□□□□□ -1.37
HIST2H3A-201ENST00000403683 OBSCNQ5VST9 7968 aa6.4□□□□□ -1.38
HIST2H3A-201ENST00000403683 INE1O15225 51 aa6.37□□□□□ -1.39
HIST2H3A-201ENST00000403683 LCE3EQ5T5B0 92 aa6.35□□□□□ -1.39
HIST2H3A-201ENST00000403683 KRTAP4-11Q9BYQ6 195 aa6.25□□□□□ -1.41
HIST2H3A-201ENST00000403683 KRTAP5-7Q6L8G8 165 aa6.12□□□□□ -1.43
HIST2H3A-201ENST00000403683 LCE1EQ5T753 118 aa6.06□□□□□ -1.44
HIST2H3A-201ENST00000403683 KRTAP5-8O75690 187 aa5.98□□□□□ -1.45
HIST2H3A-201ENST00000403683 KRTAP5-1Q6L8H4 278 aa5.94□□□□□ -1.46
HIST2H3A-201ENST00000403683 LCE1BQ5T7P3 118 aa5.79□□□□□ -1.48
HIST2H3A-201ENST00000403683 MUC5ACP98088 5654 aa5.71□□□□□ -1.49
HIST2H3A-201ENST00000403683 LCE1CQ5T751 118 aa5.64□□□□□ -1.51
HIST2H3A-201ENST00000403683 KRTAP4-2Q9BYR5 136 aa5.63□□□□□ -1.51
HIST2H3A-201ENST00000403683 KRTAP9-9Q9BYP9 154 aa5.53□□□□□ -1.52
HIST2H3A-201ENST00000403683 MUC5BQ9HC84 5762 aaPredicted RBP5.44□□□□□ -1.54
HIST2H3A-201ENST00000403683 PRM1P04553 51 aa5.43□□□□□ -1.54
HIST2H3A-201ENST00000403683 AHNAKQ09666 5890 aaKnown RBP5.32□□□□□ -1.56
HIST2H3A-201ENST00000403683 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.21□□□□□ -1.57
HIST2H3A-201ENST00000403683 KRTAP5-11Q6L8G4 156 aa4.99□□□□□ -1.61
HIST2H3A-201ENST00000403683 KRTAP21-2Q3LI59 83 aa4.93□□□□□ -1.62
HIST2H3A-201ENST00000403683 KRTAP4-12Q9BQ66 201 aa4.85□□□□□ -1.63
HIST2H3A-201ENST00000403683 LCE1FQ5T754 118 aa4.57□□□□□ -1.68
HIST2H3A-201ENST00000403683 KRTAP4-4Q9BYR3 166 aa4.48□□□□□ -1.69
HIST2H3A-201ENST00000403683 PHGR1C9JFL3 82 aa4.29□□□□□ -1.72
HIST2H3A-201ENST00000403683 MUC19Q7Z5P9 8384 aa3.85□□□□□ -1.79
HIST2H3A-201ENST00000403683 KRTAP21-1Q3LI58 79 aa3.21□□□□□ -1.9
HIST2H3A-201ENST00000403683 MUC16Q8WXI7 14507 aa2.75□□□□□ -1.97
Retrieved 77 of 20,778 RNA–protein pairs in 6.5 ms