RNA–Protein interactions for RNA: ENST00000403444.7

CEACAM1-207, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM1, Length 3,427 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-207ENST00000403444 KRTAP4-11Q9BYQ6 195 aa2.58□□□□□ -2
CEACAM1-207ENST00000403444 DSTQ03001 7570 aaKnown RBP2.58□□□□□ -2
CEACAM1-207ENST00000403444 KRTAP10-12P60413 245 aa2.57□□□□□ -2
CEACAM1-207ENST00000403444 KRTAP10-7P60409 375 aaPredicted RBP2.56□□□□□ -2
CEACAM1-207ENST00000403444 KRTAP12-3P60328 96 aa2.55□□□□□ -2
CEACAM1-207ENST00000403444 KRTAP19-6Q3LI70 58 aa2.55□□□□□ -2
CEACAM1-207ENST00000403444 KRTAP10-5P60370 271 aa2.54□□□□□ -2
CEACAM1-207ENST00000403444 MT1XP80297 61 aa2.53□□□□□ -2
CEACAM1-207ENST00000403444 SYNE1Q8NF91 8797 aaKnown RBP2.52□□□□□ -2.01
CEACAM1-207ENST00000403444 KRTAP4-2Q9BYR5 136 aa2.5□□□□□ -2.01
CEACAM1-207ENST00000403444 CRCT1Q9UGL9 99 aa2.49□□□□□ -2.01
CEACAM1-207ENST00000403444 FCGBPQ9Y6R7 5405 aaPredicted RBP2.49□□□□□ -2.01
CEACAM1-207ENST00000403444 KRTAP19-5Q3LI72 72 aa2.46□□□□□ -2.02
CEACAM1-207ENST00000403444 KRTAP8-1Q8IUC2 63 aa2.42□□□□□ -2.02
CEACAM1-207ENST00000403444 MUC12Q9UKN1 5478 aa2.4□□□□□ -2.03
CEACAM1-207ENST00000403444 LCE1AQ5T7P2 110 aa2.36□□□□□ -2.03
CEACAM1-207ENST00000403444 SYNE2Q8WXH0 6885 aaKnown RBP2.34□□□□□ -2.03
CEACAM1-207ENST00000403444 MACF1Q9UPN3 7388 aaKnown RBP2.33□□□□□ -2.04
CEACAM1-207ENST00000403444 KRTAP5-9P26371 169 aa2.33□□□□□ -2.04
CEACAM1-207ENST00000403444 LCE3CQ5T5A8 94 aa2.32□□□□□ -2.04
CEACAM1-207ENST00000403444 KRTAP4-3Q9BYR4 195 aa2.29□□□□□ -2.04
CEACAM1-207ENST00000403444 KRTAP9-6A8MVA2 160 aa2.28□□□□□ -2.04
CEACAM1-207ENST00000403444 KRTAP19-7Q3SYF9 63 aa2.28□□□□□ -2.04
CEACAM1-207ENST00000403444 MT3P25713 68 aa2.28□□□□□ -2.04
CEACAM1-207ENST00000403444 MT1GP13640 62 aa2.23□□□□□ -2.05
CEACAM1-207ENST00000403444 KRTAP2-2Q9BYT5 123 aa2.23□□□□□ -2.05
CEACAM1-207ENST00000403444 KRTAP6-3Q3LI67 103 aa2.22□□□□□ -2.05
CEACAM1-207ENST00000403444 MT1EP04732 61 aa2.21□□□□□ -2.06
CEACAM1-207ENST00000403444 KRTAP2-3P0C7H8 128 aa2.21□□□□□ -2.06
CEACAM1-207ENST00000403444 KRTAP2-4Q9BYR9 128 aa2.21□□□□□ -2.06
CEACAM1-207ENST00000403444 KRTAP2-1Q9BYU5 128 aa2.21□□□□□ -2.06
CEACAM1-207ENST00000403444 KRTAP12-4P60329 112 aa2.19□□□□□ -2.06
CEACAM1-207ENST00000403444 SPRR2FQ96RM1 72 aa2.17□□□□□ -2.06
CEACAM1-207ENST00000403444 NEBP20929 6669 aa2.17□□□□□ -2.06
CEACAM1-207ENST00000403444 MT1LQ93083 61 aa2.17□□□□□ -2.06
CEACAM1-207ENST00000403444 MDN1Q9NU22 5596 aa2.15□□□□□ -2.06
CEACAM1-207ENST00000403444 LCE1EQ5T753 118 aa2.15□□□□□ -2.07
CEACAM1-207ENST00000403444 KRTAP5-3Q6L8H2 238 aa2.13□□□□□ -2.07
CEACAM1-207ENST00000403444 KRTAP19-3Q7Z4W3 81 aa2.1□□□□□ -2.07
CEACAM1-207ENST00000403444 MT1MQ8N339 61 aa2.07□□□□□ -2.08
CEACAM1-207ENST00000403444 KRTAP5-5Q701N2 237 aaPredicted RBP2.04□□□□□ -2.08
CEACAM1-207ENST00000403444 LCE1FQ5T754 118 aa2.01□□□□□ -2.09
CEACAM1-207ENST00000403444 PRM1P04553 51 aa2□□□□□ -2.09
CEACAM1-207ENST00000403444 SPRR2EP22531 72 aa1.97□□□□□ -2.09
CEACAM1-207ENST00000403444 SPRR2BP35325 72 aa1.97□□□□□ -2.09
CEACAM1-207ENST00000403444 SPRR2AP35326 72 aa1.97□□□□□ -2.09
CEACAM1-207ENST00000403444 KRTAP5-4Q6L8H1 288 aa1.97□□□□□ -2.09
CEACAM1-207ENST00000403444 KRTAP6-1Q3LI64 71 aa1.92□□□□□ -2.1
CEACAM1-207ENST00000403444 SPRR2DP22532 72 aa1.91□□□□□ -2.1
CEACAM1-207ENST00000403444 LCE3DQ9BYE3 92 aa1.88□□□□□ -2.11
CEACAM1-207ENST00000403444 GPR98Q8WXG9 6306 aa1.86□□□□□ -2.11
CEACAM1-207ENST00000403444 KRTAP20-1Q3LI63 56 aa1.83□□□□□ -2.12
CEACAM1-207ENST00000403444 LCE3EQ5T5B0 92 aa1.82□□□□□ -2.12
CEACAM1-207ENST00000403444 MT1AP04731 61 aa1.82□□□□□ -2.12
CEACAM1-207ENST00000403444 KRTAP5-2Q701N4 177 aa1.8□□□□□ -2.12
CEACAM1-207ENST00000403444 HMCN1Q96RW7 5635 aa1.77□□□□□ -2.13
CEACAM1-207ENST00000403444 MT4P47944 62 aa1.77□□□□□ -2.13
CEACAM1-207ENST00000403444 MUC19Q7Z5P9 8384 aa1.77□□□□□ -2.13
CEACAM1-207ENST00000403444 KRTAP6-2Q3LI66 62 aa1.76□□□□□ -2.13
CEACAM1-207ENST00000403444 KRTAP20-2Q3LI61 65 aa1.73□□□□□ -2.13
CEACAM1-207ENST00000403444 KRTAP5-11Q6L8G4 156 aa1.73□□□□□ -2.13
CEACAM1-207ENST00000403444 AHNAK2Q8IVF2 5795 aa1.63□□□□□ -2.15
CEACAM1-207ENST00000403444 LCE1BQ5T7P3 118 aa1.62□□□□□ -2.15
CEACAM1-207ENST00000403444 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.59□□□□□ -2.15
CEACAM1-207ENST00000403444 KRTAP5-10Q6L8G5 202 aa1.58□□□□□ -2.16
CEACAM1-207ENST00000403444 MUC5ACP98088 5654 aa1.58□□□□□ -2.16
CEACAM1-207ENST00000403444 KRTAP5-7Q6L8G8 165 aa1.57□□□□□ -2.16
CEACAM1-207ENST00000403444 KRTAP5-1Q6L8H4 278 aa1.53□□□□□ -2.17
CEACAM1-207ENST00000403444 KRTAP5-8O75690 187 aa1.51□□□□□ -2.17
CEACAM1-207ENST00000403444 MUC5BQ9HC84 5762 aaPredicted RBP1.44□□□□□ -2.18
CEACAM1-207ENST00000403444 LCE1CQ5T751 118 aa1.42□□□□□ -2.18
CEACAM1-207ENST00000403444 AHNAKQ09666 5890 aaKnown RBP1.42□□□□□ -2.18
CEACAM1-207ENST00000403444 KRTAP4-4Q9BYR3 166 aa1.39□□□□□ -2.19
CEACAM1-207ENST00000403444 KRTAP21-2Q3LI59 83 aa1.25□□□□□ -2.21
CEACAM1-207ENST00000403444 KRTAP21-1Q3LI58 79 aa1.23□□□□□ -2.21
CEACAM1-207ENST00000403444 PHGR1C9JFL3 82 aa1.09□□□□□ -2.23
CEACAM1-207ENST00000403444 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 76.4 ms