RNA–Protein interactions for RNA: ENST00000402583.5

CBX1-203, Transcript of chromobox 1, humanhuman

TSL 4

Gene CBX1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-203ENST00000402583 MT1XP80297 61 aa3.75□□□□□ -1.81
CBX1-203ENST00000402583 LCE3AQ5TA76 89 aa3.75□□□□□ -1.81
CBX1-203ENST00000402583 KRTAP8-1Q8IUC2 63 aa3.71□□□□□ -1.82
CBX1-203ENST00000402583 KRTAP10-12P60413 245 aa3.7□□□□□ -1.82
CBX1-203ENST00000402583 SPRR5A0A1B0GTR4 108 aa3.68□□□□□ -1.82
CBX1-203ENST00000402583 KRTAP12-3P60328 96 aa3.62□□□□□ -1.83
CBX1-203ENST00000402583 KRTAP10-7P60409 375 aaPredicted RBP3.61□□□□□ -1.83
CBX1-203ENST00000402583 CRCT1Q9UGL9 99 aa3.58□□□□□ -1.84
CBX1-203ENST00000402583 LCE1FQ5T754 118 aa3.55□□□□□ -1.84
CBX1-203ENST00000402583 FSIP2Q5CZC0 6907 aa3.54□□□□□ -1.84
CBX1-203ENST00000402583 KRTAP19-5Q3LI72 72 aa3.48□□□□□ -1.85
CBX1-203ENST00000402583 LCE1EQ5T753 118 aa3.45□□□□□ -1.86
CBX1-203ENST00000402583 LCE3CQ5T5A8 94 aa3.4□□□□□ -1.87
CBX1-203ENST00000402583 KRTAP19-6Q3LI70 58 aa3.39□□□□□ -1.87
CBX1-203ENST00000402583 USH2AO75445 5202 aa3.37□□□□□ -1.87
CBX1-203ENST00000402583 KRTAP19-7Q3SYF9 63 aa3.34□□□□□ -1.87
CBX1-203ENST00000402583 KRTAP5-11Q6L8G4 156 aa3.32□□□□□ -1.88
CBX1-203ENST00000402583 MT1EP04732 61 aa3.29□□□□□ -1.88
CBX1-203ENST00000402583 SSPOA2VEC9 5147 aa3.26□□□□□ -1.89
CBX1-203ENST00000402583 MT1LQ93083 61 aa3.26□□□□□ -1.89
CBX1-203ENST00000402583 INE1O15225 51 aa3.22□□□□□ -1.89
CBX1-203ENST00000402583 KRTAP9-6A8MVA2 160 aa3.16□□□□□ -1.9
CBX1-203ENST00000402583 KMT2DO14686 5537 aa3.15□□□□□ -1.91
CBX1-203ENST00000402583 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.14□□□□□ -1.91
CBX1-203ENST00000402583 MT1GP13640 62 aa3.13□□□□□ -1.91
CBX1-203ENST00000402583 SYNE2Q8WXH0 6885 aaKnown RBP3.12□□□□□ -1.91
CBX1-203ENST00000402583 KRTAP19-3Q7Z4W3 81 aa3.12□□□□□ -1.91
CBX1-203ENST00000402583 MACF1Q9UPN3 7388 aaKnown RBP3.1□□□□□ -1.91
CBX1-203ENST00000402583 KRTAP2-3P0C7H8 128 aa3.09□□□□□ -1.91
CBX1-203ENST00000402583 KRTAP2-4Q9BYR9 128 aa3.09□□□□□ -1.91
CBX1-203ENST00000402583 KRTAP2-1Q9BYU5 128 aa3.09□□□□□ -1.91
CBX1-203ENST00000402583 MT1MQ8N339 61 aa3.08□□□□□ -1.92
CBX1-203ENST00000402583 FCGBPQ9Y6R7 5405 aaPredicted RBP3.07□□□□□ -1.92
CBX1-203ENST00000402583 KRTAP6-3Q3LI67 103 aa3.05□□□□□ -1.92
CBX1-203ENST00000402583 SPRR2FQ96RM1 72 aa3.04□□□□□ -1.92
CBX1-203ENST00000402583 LCE3EQ5T5B0 92 aa3.01□□□□□ -1.93
CBX1-203ENST00000402583 KRTAP4-3Q9BYR4 195 aa2.99□□□□□ -1.93
CBX1-203ENST00000402583 KRTAP20-1Q3LI63 56 aa2.95□□□□□ -1.94
CBX1-203ENST00000402583 KRTAP5-9P26371 169 aa2.91□□□□□ -1.94
CBX1-203ENST00000402583 NEBP20929 6669 aa2.89□□□□□ -1.95
CBX1-203ENST00000402583 SPRR2EP22531 72 aa2.83□□□□□ -1.96
CBX1-203ENST00000402583 SPRR2BP35325 72 aa2.83□□□□□ -1.96
CBX1-203ENST00000402583 SPRR2AP35326 72 aa2.83□□□□□ -1.96
CBX1-203ENST00000402583 MUC12Q9UKN1 5478 aa2.83□□□□□ -1.96
CBX1-203ENST00000402583 MT1AP04731 61 aa2.79□□□□□ -1.96
CBX1-203ENST00000402583 GPR98Q8WXG9 6306 aa2.77□□□□□ -1.97
CBX1-203ENST00000402583 KRTAP5-1Q6L8H4 278 aa2.75□□□□□ -1.97
CBX1-203ENST00000402583 SPRR2DP22532 72 aa2.73□□□□□ -1.97
CBX1-203ENST00000402583 KRTAP6-1Q3LI64 71 aa2.73□□□□□ -1.97
CBX1-203ENST00000402583 KRTAP5-5Q701N2 237 aaPredicted RBP2.73□□□□□ -1.97
CBX1-203ENST00000402583 DSTQ03001 7570 aaKnown RBP2.7□□□□□ -1.98
CBX1-203ENST00000402583 KRTAP12-4P60329 112 aa2.69□□□□□ -1.98
CBX1-203ENST00000402583 MDN1Q9NU22 5596 aa2.65□□□□□ -1.99
CBX1-203ENST00000402583 LCE3DQ9BYE3 92 aa2.61□□□□□ -1.99
CBX1-203ENST00000402583 SYNE1Q8NF91 8797 aaKnown RBP2.6□□□□□ -1.99
CBX1-203ENST00000402583 KRTAP4-4Q9BYR3 166 aa2.6□□□□□ -1.99
CBX1-203ENST00000402583 KRTAP5-4Q6L8H1 288 aa2.59□□□□□ -1.99
CBX1-203ENST00000402583 KRTAP6-2Q3LI66 62 aa2.48□□□□□ -2.01
CBX1-203ENST00000402583 PRM1P04553 51 aa2.35□□□□□ -2.03
CBX1-203ENST00000402583 AHNAK2Q8IVF2 5795 aa2.35□□□□□ -2.03
CBX1-203ENST00000402583 OBSCNQ5VST9 7968 aa2.35□□□□□ -2.03
CBX1-203ENST00000402583 MT4P47944 62 aa2.34□□□□□ -2.03
CBX1-203ENST00000402583 KRTAP20-2Q3LI61 65 aa2.32□□□□□ -2.04
CBX1-203ENST00000402583 LCE1CQ5T751 118 aa2.3□□□□□ -2.04
CBX1-203ENST00000402583 LCE1BQ5T7P3 118 aa2.3□□□□□ -2.04
CBX1-203ENST00000402583 KRTAP5-2Q701N4 177 aa2.3□□□□□ -2.04
CBX1-203ENST00000402583 KRTAP5-10Q6L8G5 202 aa2.29□□□□□ -2.04
CBX1-203ENST00000402583 KRTAP5-7Q6L8G8 165 aa2.26□□□□□ -2.05
CBX1-203ENST00000402583 HMCN1Q96RW7 5635 aa2.18□□□□□ -2.06
CBX1-203ENST00000402583 AHNAKQ09666 5890 aaKnown RBP2.14□□□□□ -2.07
CBX1-203ENST00000402583 MUC5BQ9HC84 5762 aaPredicted RBP2.03□□□□□ -2.08
CBX1-203ENST00000402583 MUC5ACP98088 5654 aa1.96□□□□□ -2.1
CBX1-203ENST00000402583 KRTAP5-8O75690 187 aa1.9□□□□□ -2.11
CBX1-203ENST00000402583 KRTAP21-2Q3LI59 83 aa1.78□□□□□ -2.12
CBX1-203ENST00000402583 MUC19Q7Z5P9 8384 aa1.77□□□□□ -2.13
CBX1-203ENST00000402583 KRTAP21-1Q3LI58 79 aa1.48□□□□□ -2.17
CBX1-203ENST00000402583 PHGR1C9JFL3 82 aa1.46□□□□□ -2.18
CBX1-203ENST00000402583 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 93.9 ms