RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 KRTAP4-7Q9BYR0 210 aa8.89□□□□□ -0.99
CPNE1-205ENST00000401607 KRTAP19-3Q7Z4W3 81 aa8.89□□□□□ -0.99
CPNE1-205ENST00000401607 KRTAP5-9P26371 169 aa8.87□□□□□ -0.99
CPNE1-205ENST00000401607 LUZP6Q538Z0 58 aa8.84□□□□□ -0.99
CPNE1-205ENST00000401607 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.83□□□□□ -1
CPNE1-205ENST00000401607 NDUFAF8A1L188 74 aa8.8□□□□□ -1
CPNE1-205ENST00000401607 MT1GP13640 62 aa8.79□□□□□ -1
CPNE1-205ENST00000401607 MT1MQ8N339 61 aa8.73□□□□□ -1.01
CPNE1-205ENST00000401607 LCE5AQ5TCM9 118 aa8.72□□□□□ -1.01
CPNE1-205ENST00000401607 KRTAP6-3Q3LI67 103 aa8.64□□□□□ -1.03
CPNE1-205ENST00000401607 KRTAP9-6A8MVA2 160 aa8.63□□□□□ -1.03
CPNE1-205ENST00000401607 KRTAP4-3Q9BYR4 195 aa8.63□□□□□ -1.03
CPNE1-205ENST00000401607 LCE1AQ5T7P2 110 aa8.61□□□□□ -1.03
CPNE1-205ENST00000401607 MDN1Q9NU22 5596 aa8.54□□□□□ -1.04
CPNE1-205ENST00000401607 SPRR2EP22531 72 aa8.51□□□□□ -1.05
CPNE1-205ENST00000401607 SPRR2BP35325 72 aa8.51□□□□□ -1.05
CPNE1-205ENST00000401607 SPRR2AP35326 72 aa8.51□□□□□ -1.05
CPNE1-205ENST00000401607 LOC100996750A0A140TA64 210 aa8.35□□□□□ -1.07
CPNE1-205ENST00000401607 KRTAP9-7A8MTY7 169 aa8.28□□□□□ -1.08
CPNE1-205ENST00000401607 DSTQ03001 7570 aaKnown RBP8.21□□□□□ -1.1
CPNE1-205ENST00000401607 SPRR2DP22532 72 aa8.19□□□□□ -1.1
CPNE1-205ENST00000401607 NEBP20929 6669 aa8.06□□□□□ -1.12
CPNE1-205ENST00000401607 KRTAP2-3P0C7H8 128 aa7.97□□□□□ -1.13
CPNE1-205ENST00000401607 KRTAP2-4Q9BYR9 128 aa7.97□□□□□ -1.13
CPNE1-205ENST00000401607 KRTAP2-1Q9BYU5 128 aa7.97□□□□□ -1.13
CPNE1-205ENST00000401607 KRTAP5-5Q701N2 237 aaPredicted RBP7.88□□□□□ -1.15
CPNE1-205ENST00000401607 H3BS24 57 aa7.86□□□□□ -1.15
CPNE1-205ENST00000401607 LCE3BQ5TA77 95 aa7.86□□□□□ -1.15
CPNE1-205ENST00000401607 MT1AP04731 61 aa7.73□□□□□ -1.17
CPNE1-205ENST00000401607 KRTAP6-1Q3LI64 71 aa7.69□□□□□ -1.18
CPNE1-205ENST00000401607 A0A0A0MQY5 61 aa7.66□□□□□ -1.18
CPNE1-205ENST00000401607 SYNE1Q8NF91 8797 aaKnown RBP7.48□□□□□ -1.21
CPNE1-205ENST00000401607 KRTAP5-4Q6L8H1 288 aa7.45□□□□□ -1.22
CPNE1-205ENST00000401607 KRTAP2-2Q9BYT5 123 aa7.36□□□□□ -1.23
CPNE1-205ENST00000401607 KRTAP20-1Q3LI63 56 aa7.35□□□□□ -1.23
CPNE1-205ENST00000401607 KRTAP9-4Q9BYQ2 154 aa7.33□□□□□ -1.24
CPNE1-205ENST00000401607 LCE4AQ5TA78 99 aa7.25□□□□□ -1.25
CPNE1-205ENST00000401607 KRTAP12-4P60329 112 aa7.21□□□□□ -1.25
CPNE1-205ENST00000401607 INE1O15225 51 aa7.19□□□□□ -1.26
CPNE1-205ENST00000401607 MT4P47944 62 aa7.13□□□□□ -1.27
CPNE1-205ENST00000401607 KRTAP4-9Q9BYQ8 210 aa7.13□□□□□ -1.27
CPNE1-205ENST00000401607 KRTAP4-6Q9BYQ5 205 aa7.12□□□□□ -1.27
CPNE1-205ENST00000401607 KRTAP6-2Q3LI66 62 aa7.05□□□□□ -1.28
CPNE1-205ENST00000401607 LCE1DQ5T752 114 aa6.99□□□□□ -1.29
CPNE1-205ENST00000401607 MT3P25713 68 aa6.97□□□□□ -1.29
CPNE1-205ENST00000401607 KRTAP20-2Q3LI61 65 aa6.97□□□□□ -1.29
CPNE1-205ENST00000401607 HMCN1Q96RW7 5635 aa6.87□□□□□ -1.31
CPNE1-205ENST00000401607 KRTAP5-2Q701N4 177 aa6.79□□□□□ -1.32
CPNE1-205ENST00000401607 LCE3DQ9BYE3 92 aa6.79□□□□□ -1.32
CPNE1-205ENST00000401607 KRTAP5-3Q6L8H2 238 aa6.72□□□□□ -1.33
CPNE1-205ENST00000401607 LCE3EQ5T5B0 92 aa6.62□□□□□ -1.35
CPNE1-205ENST00000401607 OBSCNQ5VST9 7968 aa6.44□□□□□ -1.38
CPNE1-205ENST00000401607 AHNAK2Q8IVF2 5795 aa6.05□□□□□ -1.44
CPNE1-205ENST00000401607 LCE1EQ5T753 118 aa6.02□□□□□ -1.45
CPNE1-205ENST00000401607 KRTAP4-11Q9BYQ6 195 aa5.99□□□□□ -1.45
CPNE1-205ENST00000401607 PRM1P04553 51 aa5.86□□□□□ -1.47
CPNE1-205ENST00000401607 KRTAP5-1Q6L8H4 278 aa5.86□□□□□ -1.47
CPNE1-205ENST00000401607 KRTAP5-8O75690 187 aa5.79□□□□□ -1.48
CPNE1-205ENST00000401607 KRTAP5-10Q6L8G5 202 aa5.73□□□□□ -1.49
CPNE1-205ENST00000401607 LCE1BQ5T7P3 118 aa5.69□□□□□ -1.5
CPNE1-205ENST00000401607 MUC5ACP98088 5654 aa5.68□□□□□ -1.5
CPNE1-205ENST00000401607 KRTAP4-2Q9BYR5 136 aa5.67□□□□□ -1.5
CPNE1-205ENST00000401607 LCE1CQ5T751 118 aa5.62□□□□□ -1.51
CPNE1-205ENST00000401607 KRTAP5-7Q6L8G8 165 aa5.61□□□□□ -1.51
CPNE1-205ENST00000401607 GPR98Q8WXG9 6306 aa5.32□□□□□ -1.56
CPNE1-205ENST00000401607 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.28□□□□□ -1.56
CPNE1-205ENST00000401607 KRTAP9-9Q9BYP9 154 aa5.14□□□□□ -1.59
CPNE1-205ENST00000401607 KRTAP21-2Q3LI59 83 aa5.04□□□□□ -1.6
CPNE1-205ENST00000401607 KRTAP5-11Q6L8G4 156 aa4.96□□□□□ -1.62
CPNE1-205ENST00000401607 MUC5BQ9HC84 5762 aaPredicted RBP4.9□□□□□ -1.62
CPNE1-205ENST00000401607 KRTAP4-12Q9BQ66 201 aa4.68□□□□□ -1.66
CPNE1-205ENST00000401607 KRTAP4-4Q9BYR3 166 aa4.49□□□□□ -1.69
CPNE1-205ENST00000401607 AHNAKQ09666 5890 aaKnown RBP4.48□□□□□ -1.69
CPNE1-205ENST00000401607 LCE1FQ5T754 118 aa4.4□□□□□ -1.7
CPNE1-205ENST00000401607 PHGR1C9JFL3 82 aa4.26□□□□□ -1.73
CPNE1-205ENST00000401607 MUC19Q7Z5P9 8384 aa3.81□□□□□ -1.8
CPNE1-205ENST00000401607 KRTAP21-1Q3LI58 79 aa3.59□□□□□ -1.83
CPNE1-205ENST00000401607 MUC16Q8WXI7 14507 aa2.78□□□□□ -1.96
Retrieved 78 of 20,778 RNA–protein pairs in 12.9 ms