RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 UQCR11O14957 56 aa5.49□□□□□ -1.53
ATG4B-203ENST00000400772 LCE1DQ5T752 114 aa5.49□□□□□ -1.53
ATG4B-203ENST00000400772 GPR98Q8WXG9 6306 aa5.46□□□□□ -1.53
ATG4B-203ENST00000400772 LCE4AQ5TA78 99 aa5.46□□□□□ -1.54
ATG4B-203ENST00000400772 KRTAP12-3P60328 96 aa5.43□□□□□ -1.54
ATG4B-203ENST00000400772 H3BS24 57 aa5.41□□□□□ -1.54
ATG4B-203ENST00000400772 MT4P47944 62 aa5.41□□□□□ -1.54
ATG4B-203ENST00000400772 KRTAP5-4Q6L8H1 288 aa5.4□□□□□ -1.54
ATG4B-203ENST00000400772 KRTAP4-7Q9BYR0 210 aa5.4□□□□□ -1.54
ATG4B-203ENST00000400772 HMCN1Q96RW7 5635 aa5.4□□□□□ -1.55
ATG4B-203ENST00000400772 MIR22HGQ0VDD5 57 aa5.37□□□□□ -1.55
ATG4B-203ENST00000400772 KRTAP25-1Q3LHN0 102 aa5.31□□□□□ -1.56
ATG4B-203ENST00000400772 KRTAP4-6Q9BYQ5 205 aa5.3□□□□□ -1.56
ATG4B-203ENST00000400772 PSPHP1O15172 72 aa5.26□□□□□ -1.57
ATG4B-203ENST00000400772 Q1T7F1 81 aa5.24□□□□□ -1.57
ATG4B-203ENST00000400772 V9GYY9 64 aa5.23□□□□□ -1.57
ATG4B-203ENST00000400772 K7ERS5 55 aa5.22□□□□□ -1.57
ATG4B-203ENST00000400772 AHNAK2Q8IVF2 5795 aa5.21□□□□□ -1.57
ATG4B-203ENST00000400772 KRTAP5-5Q701N2 237 aaPredicted RBP5.19□□□□□ -1.58
ATG4B-203ENST00000400772 KRTAP23-1A1A580 65 aa5.13□□□□□ -1.59
ATG4B-203ENST00000400772 LOC100996750A0A140TA64 210 aa5.12□□□□□ -1.59
ATG4B-203ENST00000400772 KRTAP5-10Q6L8G5 202 aa5.12□□□□□ -1.59
ATG4B-203ENST00000400772 KRTAP19-4Q3LI73 84 aa5.09□□□□□ -1.59
ATG4B-203ENST00000400772 KRTAP20-2Q3LI61 65 aa5.08□□□□□ -1.6
ATG4B-203ENST00000400772 KRTAP15-1Q3LI76 137 aa5.07□□□□□ -1.6
ATG4B-203ENST00000400772 A6NED7 52 aa5.05□□□□□ -1.6
ATG4B-203ENST00000400772 SPRR5A0A1B0GTR4 108 aa5.04□□□□□ -1.6
ATG4B-203ENST00000400772 LCE3CQ5T5A8 94 aa5.01□□□□□ -1.61
ATG4B-203ENST00000400772 KRTAP12-4P60329 112 aa5□□□□□ -1.61
ATG4B-203ENST00000400772 KRTAP5-3Q6L8H2 238 aa4.99□□□□□ -1.61
ATG4B-203ENST00000400772 SYNE1Q8NF91 8797 aaKnown RBP4.98□□□□□ -1.61
ATG4B-203ENST00000400772 CDC42SE1Q9NRR8 79 aa4.97□□□□□ -1.61
ATG4B-203ENST00000400772 RPS28P62857 69 aaKnown RBP4.92□□□□□ -1.62
ATG4B-203ENST00000400772 KRTAP5-7Q6L8G8 165 aa4.92□□□□□ -1.62
ATG4B-203ENST00000400772 ROMO1P60602 79 aa4.91□□□□□ -1.62
ATG4B-203ENST00000400772 MT1AP04731 61 aa4.8□□□□□ -1.64
ATG4B-203ENST00000400772 KRTAP6-1Q3LI64 71 aa4.79□□□□□ -1.64
ATG4B-203ENST00000400772 KRTAP9-6A8MVA2 160 aa4.77□□□□□ -1.65
ATG4B-203ENST00000400772 PCP4P48539 62 aa4.77□□□□□ -1.65
ATG4B-203ENST00000400772 KRTAP5-2Q701N4 177 aa4.73□□□□□ -1.65
ATG4B-203ENST00000400772 SVIPQ8NHG7 77 aa4.73□□□□□ -1.65
ATG4B-203ENST00000400772 KRTAP9-4Q9BYQ2 154 aa4.65□□□□□ -1.67
ATG4B-203ENST00000400772 KRTAP4-11Q9BYQ6 195 aa4.64□□□□□ -1.67
ATG4B-203ENST00000400772 KRTAP6-2Q3LI66 62 aa4.57□□□□□ -1.68
ATG4B-203ENST00000400772 KRTAP5-8O75690 187 aa4.51□□□□□ -1.69
ATG4B-203ENST00000400772 MT3P25713 68 aa4.38□□□□□ -1.71
ATG4B-203ENST00000400772 OBSCNQ5VST9 7968 aa4.32□□□□□ -1.72
ATG4B-203ENST00000400772 MUC5BQ9HC84 5762 aaPredicted RBP4.3□□□□□ -1.72
ATG4B-203ENST00000400772 BRK1Q8WUW1 75 aa4.27□□□□□ -1.73
ATG4B-203ENST00000400772 AHNAKQ09666 5890 aaKnown RBP4.25□□□□□ -1.73
ATG4B-203ENST00000400772 KRTAP5-1Q6L8H4 278 aa4.25□□□□□ -1.73
ATG4B-203ENST00000400772 KRTAP9-9Q9BYP9 154 aa4.23□□□□□ -1.73
ATG4B-203ENST00000400772 MUC5ACP98088 5654 aa4.22□□□□□ -1.73
ATG4B-203ENST00000400772 KRTAP4-12Q9BQ66 201 aa4.14□□□□□ -1.75
ATG4B-203ENST00000400772 A0A0A0MQY5 61 aa4.03□□□□□ -1.76
ATG4B-203ENST00000400772 LCE1EQ5T753 118 aa4.03□□□□□ -1.76
ATG4B-203ENST00000400772 PMAIP1Q13794 54 aa4.01□□□□□ -1.77
ATG4B-203ENST00000400772 PRAC1Q96KF2 57 aa3.93□□□□□ -1.78
ATG4B-203ENST00000400772 KRTAP4-2Q9BYR5 136 aa3.84□□□□□ -1.79
ATG4B-203ENST00000400772 LCE1BQ5T7P3 118 aa3.79□□□□□ -1.8
ATG4B-203ENST00000400772 LCE1CQ5T751 118 aa3.75□□□□□ -1.81
ATG4B-203ENST00000400772 PRO0628Q9UI54 55 aa3.73□□□□□ -1.81
ATG4B-203ENST00000400772 LCE3DQ9BYE3 92 aa3.58□□□□□ -1.84
ATG4B-203ENST00000400772 KTN1-AS1Q86SY8 53 aa3.52□□□□□ -1.85
ATG4B-203ENST00000400772 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.42□□□□□ -1.86
ATG4B-203ENST00000400772 KRTAP5-11Q6L8G4 156 aa3.39□□□□□ -1.87
ATG4B-203ENST00000400772 LCE3EQ5T5B0 92 aa3.37□□□□□ -1.87
ATG4B-203ENST00000400772 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
ATG4B-203ENST00000400772 LUZP6Q538Z0 58 aa3.25□□□□□ -1.89
ATG4B-203ENST00000400772 NDUFAF8A1L188 74 aa3.22□□□□□ -1.89
ATG4B-203ENST00000400772 KRTAP21-2Q3LI59 83 aa3.17□□□□□ -1.9
ATG4B-203ENST00000400772 PHGR1C9JFL3 82 aa2.96□□□□□ -1.94
ATG4B-203ENST00000400772 KRTAP4-4Q9BYR3 166 aa2.9□□□□□ -1.95
ATG4B-203ENST00000400772 MUC19Q7Z5P9 8384 aa2.65□□□□□ -1.98
ATG4B-203ENST00000400772 PRM1P04553 51 aa2.52□□□□□ -2.01
ATG4B-203ENST00000400772 KRTAP21-1Q3LI58 79 aa2.24□□□□□ -2.05
ATG4B-203ENST00000400772 INE1O15225 51 aa2.21□□□□□ -2.06
ATG4B-203ENST00000400772 MUC16Q8WXI7 14507 aa1.94□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 27.1 ms